Rattus norvegicus (rat): 294640
Help
Entry
294640 CDS
T01003
Symbol
Otp
Name
(RefSeq) homeobox protein orthopedia
KO
K24901
homeobox protein orthopedia
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
294640 (Otp)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
294640 (Otp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
294640
NCBI-ProteinID:
NP_001093993
RGD:
727945
Ensembl:
ENSRNOG00000010560
UniProt:
A6I4X3
G3V7E0
LinkDB
All DBs
Position
2:27842892..27851093
Genome browser
AA seq
325 aa
AA seq
DB search
MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGGSDPGGHPGDLAPNSDPVEGATLLPG
EDITTVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELE
RSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPG
LPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGRQQAMAQSLSQCS
LAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSS
DVWRGTSIASLRRKALEHTVSMSFT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcacgccgacctcctggacgccaggctaggtatgaaagatgccgccgagctt
ctgggccaccgggaggcggtgaagtgtaggctgggcgtggggggctctgaccctgggggc
catccaggggacctggcgcccaactccgacccagtcgaaggagccactctgctgccgggc
gaggacatcaccaccgtgggctctactcctgcttcgctggcggtgagcgccaaagaccca
gacaagcagccggggccccagggcggccccaaccccagccaagccggccagcagcagggc
caacagaaacagaagcgccaccggacacgcttcaccccagcgcagctcaacgaattggag
aggagcttcgccaagactcactaccccgacatctttatgcgtgaggagctagcgctgcgt
atcgggctgaccgaatcgcgagtgcaggtctggttccagaatcgccgcgccaagtggaag
aagcgcaagaagaccaccaacgtgttccgcgcgcccggcacgctgctgcccacgccgggg
ctgccccagttcccgtcggccgccgccgccgcggccgccgccatgggcgacagcctgtgc
tctttccacgccaacgacacccgctgggcggcggccgccatgcccggggtgtcccagctc
cctctgccgcctgcgctcggccgccagcaggccatggcgcagtcgctgtcccagtgcagc
ctggcggcggggccaccgcccaactccatgggtttgtccaacagcctggcgggctccaac
ggagcggggctgcagtcgcacctctaccagcccgccttccccggcatggtgcccgcttcc
ctccccggccccagcaacgtctccggctcgccccagctctgcagctctccggacagcagc
gacgtgtggcggggcacgagcatcgcctccctgcgccgcaaggcgctcgagcacacagtc
tccatgagcttcacctaa
DBGET
integrated database retrieval system
