Rattus norvegicus (rat): 294747
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Entry
294747 CDS
T01003
Symbol
Cspg4b
Name
(RefSeq) chondroitin sulfate proteoglycan 4B precursor
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rno00535
]
294747 (Cspg4b)
04091 Lectins [BR:
rno04091
]
294747 (Cspg4b)
Proteoglycans [BR:
rno00535
]
Cell surface proteoglycans
Others
294747 (Cspg4b)
Lectins [BR:
rno04091
]
C-Type lectins
Others
294747 (Cspg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
294747
NCBI-ProteinID:
NP_001127982
RGD:
1561161
Ensembl:
ENSRNOG00000039582
UniProt:
A0A0G2K8H2
A6I5R3
LinkDB
All DBs
Position
2:46673142..46743288
Genome browser
AA seq
2236 aa
AA seq
DB search
MGRPWARGLLLLTACLGLCRPLGGLGASFYGESYVGLSMAEVSPELSLQFRFQTSKPQGL
LFLAAGKTDYCLIELLSGTLQVKVKVGTGKQILLSEQRLRVDDLVWHSVGLQCGKDHVSL
VIDKHHETTGQLAGGMRNFTFHHGIYVGGRGGLSVPYLDRKTPNFRGCMEDVVFNQREIL
TSLRSYPGFKKVNEVSLGCSDEFFAGKDEAISFFSSRSYVTFPEWKVYHGEGILRFAVQT
ETPQALLLFQSGRGRDFVALEIHEGQLKAHVGRGGTKTQLSSFSLVSDNKWHIVQLRVAG
RHVDLMVDEHGERAGLPLQSQEFMSEGPLFVGGLNDRMWETAHSLELVSVPGKSIRGLSL
KGCLQALEANLEKRALRDALVSRDVSAGCTSEGLRGTDPPVAGEDVLPPQPSPSTAAPNA
SSPLKNRSGRFLVLNKLEVQEGGRALLGQRHIEVGVDFMYLGINYSQILFNIQEMPMHGF
LQIDVWPAQEMEQTFTLSDLRRGKVWYVHDGSEEPTDCFTFRVSSNSKKVVLSQLQDLVA
HVFNIVVLPVNDPPYLRLPEGHLLLFENTKQRLTPGLMQVLDPDTDAQHLRFSVLNTFSS
EAGFLESAKDPGKAISDFTDADLQDGNIFYVHRGHQNSRIVLRATDGELVSNTVVLRVMA
VPWDFEVADRTGVVVPQGGTVLITGSNLSVKVNGGQHELDTRYDITHPPQFGQIQHLGSN
GEWEPVRTFSQRSVDRGEIRYYSSFKELQQENVTDHFKFKVSIEGRVSKELLFPVTVEWL
QLTLPKNIPLEISNINRKVLDSGHLQAAAGSVQVAERELFFKLLMPPKKGKLLLGDEVLK
SGSMFSQKNVTDSMVSYKPQGRPWEHSQDSFSFSIVVKQVESKGHTFRINLEVDKTHITV
TNTGLYVKEGEWTIITKSEFFVQTLDHRIFQYKVTKSPQHGELKLVSSSTSPGSESRATG
FTDDDIVSERLIYAHDDSETRWDEFVILASATGLGQQGGVRSPDSEHVSTEIKVSISVEL
KNDEKPVRVVDKIFHVVRDSQRLLTLADLCYHDPDVDFDDGQLLYTRHGIPNGDLVKATD
PTQKLYQFRQEDLREGRVLFKHNGPDSARFLLFVTDGVHYTSSLLEVSVSEAYIHIINNT
GLLVHRGRDGFLTTANLSVTTNQDVRTDHEFEFHVVQPPKHGRLLVNNSAFHSFSQHDLK
QGHVTYRYNGDGNSDIFNLTVTVKDTSLDVSVCVQVSSEDHQHYSPILHRESLTVEGKPV
KLSRGKLQVAQESIDYVHNGSEEFDSLTILANSSELGKQSLPQTLFVTVESVNDEAPVVT
ANKVLQVWVNSVTEVTRGDLCAEDGDSSPQDLVYWVTPPSNGHLALRSIPGRSIQNFTQA
QIDEGQLVFVHSGATSGGFSFQVTDGLNSAPRQIFSVTARALIISLEVNRGLSIFPGSTK
PLSSHDLRAVTNDDKAGNRTITFTVVRSPRLGRLLKMYPDSHTEDVSVFTQCLVSEGLIL
YQHLDLDTAWASEDSFTFTASSPPAELGPEDFRITISRETNESGRQNRLRANTGASVKEG
DKVLIDQSKLDASNLLLQLPRPQRSSHEIWYQVTALPHHGTIMVGERNITTEKPYFSQQI
VNAFGVTYLHDDSESLADNFTFAVWPNPKNQSTSKPEADFLEEVFTITITPVNDHPPALK
TKGLRLTVLQGGRLVVGPEILKVEDIDSPPSEIQYVVIRPPNNGFLAMAHAPDDSAHHFT
QADVNNAQVWFIQDGSPSSGVFYFSVTDGEHRPLYKLFHLDVTPISITLVNLTDLLLPQG
QTTVPITNTHLSAVTNGGSPQITYRIAQPLQSGHLLIENQVVSSFRQEDLDSGRLSYHMT
NLTASEDQLRFSLFTTECNLTEQTLGIRVQPLLWVGSNLKVTNRVAHRLRREDLDATELA
NRSKSDPTFEVIQPPIHGRLVRRAVDSPVAEEVTQFTQTDINQGQLVLEPQANLTGTHTL
NDSFTFLLSADDVQPATGHLAFTIVPPDTLPLQIFTPHVPLVVTGETPVASVFSQKKLRA
SIIKQTENPGNLTQRKWQGTDFWGQLSGKEPNIDAKVSPTRVTWPYAATKVGVTLSGEAM
QPEVSRHPLMVIIPLAAVFLLLLVTVVALCVWMLGRKEDRPNPLIQPKTNLKSPSPRFRA
ERSGAIPTVTVTPLIRSSGSPAPSMFQPQSYEQPAPLGAGHIEKCAPWEAWVNLDPDMAK
LCRQTNPALKHNQYWV
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atggggcggccctgggcccgtggcctcctcctgctcaccgcctgcctggggctctgccgg
ccgctcggggggcttggagcatctttttatggtgaaagctacgtggggctcagcatggca
gaggtttcccctgagctctcgcttcagttcagatttcaaaccagcaagccacaaggctta
ctcttccttgcagctgggaagactgactactgcctaatagaacttctgtcgggaacatta
caggtaaaagtaaaagtgggcacggggaaacagatcctcctttctgagcaaagacttcgt
gtggatgatttggtctggcattcggtgggactgcagtgtggcaaagatcatgtttccttg
gtcattgacaagcatcatgagacaaccggccagctggctggggggatgcgtaacttcacc
tttcaccatggaatctatgtaggaggtcgtggggggctcagtgtcccttacctggacaga
aagacccccaatttccgaggatgcatggaggatgtggtgtttaaccagagggagatcctt
acgtcccttaggtcttaccctggctttaagaaggttaatgaggtgtcactggggtgtagc
gatgagttttttgctgggaaggatgaggccattagctttttcagctctaggtcctacgtc
accttcccagaatggaaggtgtaccacggggaagggatcctgaggtttgctgtgcaaacc
gaaaccccacaagctttgcttttgtttcagtcaggtagaggaagagattttgttgccttg
gaaatccatgagggtcaactcaaggctcatgtaggaaggggcggaacaaaaactcagctt
tcgtcgttcagcttggttagtgacaacaagtggcacattgttcaactcagagtcgcgggg
aggcatgtggacctcatggtggatgaacatggggaaagggcggggctccctctgcaaagc
caagagttcatgtctgaaggacccctgttcgtgggaggcctgaatgaccggatgtgggaa
acagcacacagcttagaacttgtgtctgtgcccgggaaatccattcgaggcttgtctctg
aaagggtgcctgcaagccttggaagccaatttggaaaagagagcattacgggatgctctt
gtctccagagacgtttctgctgggtgcacaagcgagggtctccgtggtacagatcctcct
gtggcaggggaagatgtgcttccgccacagccatccccttccactgccgcccccaatgcc
agttctcctctgaaaaatcgaagtggcaggtttttggttttgaataagctggaagtccaa
gaaggtggacgggccttactgggacagaggcacatagaagtgggtgtggacttcatgtat
ctgggtatcaattattcccagatactgtttaatatacaggaaatgccaatgcacgggttc
cttcaaatagatgtttggcctgcacaggaaatggagcagacttttactctgtcagatctg
aggcgtgggaaagtgtggtatgtccacgatggttcggaagagcctacagattgttttacg
tttcgggtttcttctaatagcaagaaggtggtgctgtcccagctgcaggatctcgttgca
catgtctttaacattgtcgtccttccagtgaacgaccccccgtatctcaggctcccagaa
ggccacttgcttctctttgagaacaccaagcagcgactaacacctggcctgatgcaggtg
ttagatcctgacacggatgctcaacacctcaggttttcagttcttaacaccttcagttca
gaggctgggtttttagaaagtgccaaggaccctgggaaagccatcagtgatttcacagac
gcggatttacaagatggcaacattttctatgtgcacaggggtcatcaaaactcccggatc
gttctgagagcaactgatggtgaactggttagcaatactgtggtgttgcgggtcatggct
gtcccctgggactttgaagtggctgataggactggcgtggtggtaccacaaggtggtacc
gttctcatcaccgggagcaacttgtctgtgaaggtgaatggtggacaacatgagctggac
actcgctatgacatcacacatccacctcagtttggccaaattcagcatctgggttctaac
ggagaatgggaaccagttaggaccttttctcaacgttctgttgaccggggtgagatccga
tactacagttcattcaaagaattgcagcaagaaaatgttacggatcactttaaatttaaa
gttagcatagagggaagagtaagcaaagagctcctgtttcctgtgactgtggagtggctg
caactgacacttccgaaaaatatccctctggagattagcaacataaacaggaaagtattg
gactctggtcacctgcaggctgcagcagggagtgtgcaagtagctgagagggaactgttt
ttcaagctactgatgccacctaagaaagggaagctgctactcggcgatgaagtacttaaa
tccggttcgatgttcagtcaaaagaacgttacagactctatggtaagctacaaacctcag
gggaggccctgggaacactcccaggattcttttagtttctcaatagttgtaaaacaggta
gaatccaaaggtcataccttcaggataaaccttgaagtagataagacacatatcactgta
acaaacactggactgtatgtaaaagagggagaatggacaataattacaaaatcagaattc
tttgttcaaacattggaccatcgtatcttccaatataaagtcaccaagagtcctcagcat
ggggaattgaaattggtcagctcctctacttctccgggaagtgagagtagggccactgga
ttcacagatgacgacatagtgagtgagaggctgatctatgctcatgatgactctgagacc
cgctgggatgaattcgtcattttggcttctgccacaggcctgggccaacagggaggggtc
agaagccctgactctgagcacgtgtctacagaaatcaaagtcagcatttctgttgagttg
aagaatgatgagaagccagtgcgtgtggtagataaaatctttcatgtcgtgcgggacagc
cagcggttgctgacactagcagatctctgttaccacgaccccgacgtagattttgatgat
ggccagttgctctatactagacatggtataccaaatggagatttggtgaaagccactgac
ccgactcagaagctctaccagttcagacaagaggatctacgggaagggcgtgtgctcttc
aagcacaatggtccagactctgctcggttcctgctgtttgtgacagatggcgtccattat
acgtcatcccttttggaggtcagcgtgtcagaggcctatatccatataattaacaacaca
gggctgcttgtgcacagagggagggacggctttctaacaacagccaacctgagcgtcacc
acaaaccaagacgtcagaacggaccatgagtttgaattccacgtcgtgcaacccccgaaa
catggcagactcctggtcaacaattctgcctttcactcattctcccagcatgacctaaag
cagggacatgtgacttacaggtacaacggcgatggcaactctgatatctttaacctgaca
gtgacagttaaagatacctccctagatgtgagcgtctgtgtccaagtgtcctcagaggat
caccaacattacagtccgattctgcacagggagagccttacagttgaaggaaaaccagta
aaactgagtagaggaaagctccaggtggcgcaggagtcgattgactatgttcataatggc
agtgaggagttcgacagtctcaccatcttggcgaacagctccgagcttgggaaacagagt
ctgcctcagactctgtttgtgaccgttgagtctgtaaatgatgaggctccggtagtaaca
gccaataaagtcctccaggtgtgggtgaattctgtcactgaggtgaccagaggggacctg
tgtgcagaagatggggattcttccccccaggacttggtctactgggttactcctcccagc
aacgggcatctggctctcaggtccattcctggcagaagcatccagaacttcactcaggct
caaattgacgagggtcagctcgtgtttgtgcactctggagcaacgtcaggtggctttagt
ttccaggttactgacggtttgaattccgcacctcgacaaatctttagtgtcactgcccgc
gcgctgatcattagcttagaagtcaacagaggattgagcatcttcccaggttccacaaag
ccactttcgtctcatgacctgagagccgtgaccaatgatgacaaggcaggaaacagaact
ataacatttacggttgtcaggtcccctaggcttgggaggctgctgaagatgtacccggac
agtcacacggaggacgtttccgtttttacccaatgtctggtcagtgaagggctgattctt
taccagcacctggatcttgacacagcatgggcctcagaagactccttcacattcacagca
tcttcccctccagcagagctgggccctgaggatttccggattactatttcacgtgaaacc
aatgagtcgggccgacagaacaggctgcgtgcaaatacaggagcctctgtcaaggaggga
gataaagttctcattgaccaatctaaattagatgcttccaacctcttacttcagctgccc
cgacctcagcgttcttcccatgaaatctggtatcaggttacagctcttcctcaccatgga
accattatggttggagagagaaatattaccacagaaaagccctacttctcccagcaaata
gttaatgcatttggagtcacatatcttcacgatgactctgaatcattggctgataatttt
acctttgctgtttggccaaacccgaagaatcagtccaccagcaagccagaggccgacttt
ctggaagaggtgttcaccatcaccatcacccctgtgaacgatcatcctccagcattaaag
accaaagggcttcggcttacagttctacagggcggtaggttggttgtgggacctgaaatc
ctcaaggtagaagatatagacagtcctccaagtgaaatccaatatgtggtcatccgtcct
cccaacaatggctttttagcaatggctcatgctccagacgacagtgctcaccattttaca
caggctgacgtcaacaacgctcaggtgtggtttatacaagacggaagtccatcctctgga
gtgttttatttcagtgtgactgacggtgaacaccggcctctctataagcttttccacctg
gatgtcacccccatctccatcacgcttgtgaacctcacagacctgcttctcccacaaggc
cagacaactgtccccatcacaaatactcatctctcagcagtgaccaatggtgggagccct
cagatcacctacagaatagcacagcccctccaaagcggccacttgctgattgaaaaccag
gtggtcagcagcttcaggcaagaggatttggattctggaagactctcttaccacatgacc
aatctcacagcctcagaagatcaactgaggttctcactgtttacaacagagtgcaacttg
acagaacagaccctgggcatcagggtacagcctttgttgtgggttggatcaaacttgaaa
gttaccaacagagtggctcaccggctcaggagagaggatctggatgcaactgagctcgct
aacagaagtaagagtgaccccacatttgaagtgatacaaccccccatccatggacgactt
gttcgaagagcagtcgacagccctgtggcggaagaggtcactcagttcacccagacagac
atcaaccaagggcagctggtgcttgagccacaggctaatctaacaggcacccatacactg
aatgactccttcaccttcttgctcagtgcagacgatgtgcagccagcaacaggccatctg
gcctttactatagtgccaccagacaccttacctttacagatattcacaccacatgtgcct
ttagtagtcactggagagacccctgtggcctctgttttctctcagaaaaaacttagggct
tctattataaaacagacagaaaatccaggaaatctgacccagcgcaaatggcaagggaca
gatttctggggtcagctcagtggcaaagaaccaaatatagatgccaaggtctcccccacc
agagtcacttggccatatgctgccaccaaagtgggggtgactctttctggggaagccatg
cagccggaagtgagccgtcaccctctgatggtcatcatacctttggctgctgtgttcctc
ctcctgttagtgactgtggtggccctgtgtgtttggatgctgggccgaaaggaggacagg
cccaatcctcttatccagccaaagacgaacctcaaatccccatccccgcgctttagagca
gagaggagtggagccattcccacagtcacggtgacgccccttattagaagctctggcagc
ccggctcccagtatgttccagccgcaatcgtatgaacagccagcccctctgggggcgggg
catatagagaaatgtgctccttgggaggcgtgggtgaacctggatcctgatatggccaag
ctctgtcgtcaaaccaatccggctctgaaacacaaccagtattgggtataa
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integrated database retrieval system
