KEGG   Rattus norvegicus (rat): 294787
Entry
294787            CDS       T01003                                 
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
  KO
K06672  cohesin loading factor subunit SCC2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    294787 (Nipbl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    294787 (Nipbl)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    294787 (Nipbl)
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT HEAT Cnd1 Cnd3 DNA_repr_REX1B
Other DBs
NCBI-GeneID: 294787
NCBI-ProteinID: XP_038959465
RGD: 1306393
Ensembl: ENSRNOG00000056907
LinkDB
Position
2:complement(59126676..59314841)
AA seq 2798 aa
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNSRIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSAMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
SLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQNEKAAMYDIISSPTKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRSLNAAQCL
SQQEQTAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRADSQASLTQDSDNIKKPEETKQCNDAPISVLQEDSVGSLKSIPENHPETP
KNKSDPELSKSEMKQNESRLSESKPNENQLGESKSNESKLETKTETQTEELKQSENKTTE
SKQSESAVVEPKQNENRLCDTKPNDNKQNNTRSENTKARPETPKQKAESRPETPKQKSEG
RPETPKQKGDGRPETPKQKSEGRPETPKQKGEGRPETPKHRHENRKDSGKPSTEKKPDVS
KHKQDIKSDSSRLKSERAEALKQRPDGRSESLRRDHDSKQKSDDRGESERHRGDQSRVRR
PETLRSSSRNEHSTKSDGSKTEKLERKHRHESGDSRDRPSGEQKSRPDSPRVKQGDTNKS
RPGFKSPNSKDDKRTEGNRSKVDSNKAHTDNKAEFPSYLLGGRSSALKNFVIPKIKRDKD
GNITQETKKMDMKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREEKSRS
SLKSLKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYA
EISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHDGRRSSGGGRY
RNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASI
ENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVL
NILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNMPKA
VYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQRVIVML
YNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYE
KHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPS
SEKDPNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFV
QDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVT
SKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTL
ETEKAMKSQKDEESSDGAHHAKEIETTGQIMHRAESRKRFLRSIIKTTPSQFSTLKMNSD
TVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSI
LARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRK
RVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAM
TRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYE
ESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICN
VAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNFKFV
WACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKGNSK
VNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNSILSDKNSS
VNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQV
LEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEID
KKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNRQHR
RAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQ
SFKESMVKDKRKERKTSPAKENESSESEEEVCRPRKSRKRVDSESDSDSEDDVNSVMKCL
PENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGV
HFHPKQTLDFLRSDMANSKLTEDVKRSIVRQYLDFKLLMEHLDPDEEEEEGEVSASTNAR
NKAITSLLGGGSPKNNPAADTEDEESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVD
VMDVIAICCPKYKDRPQIARVVQRTSSGVSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTI
KESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq 8397 nt   +upstreamnt  +downstreamnt
atgaatggggatatgccccatgtccccataactactcttgcggggatcgctagtcttacg
gacctcctgaaccagctgcctctcccatctcctttacctgctacaactacaaagagcctc
ctcttcaactcccggatagcagaagaggtgaactgccttttggcctgtagggatgacaat
ttggtttcacagcttgtccatagtctcaaccaggtatcaacagatcacatagaactgaaa
gataaccttggcagtgatgatcccgaaggcgatataccagtcctgttgcaggccgtcctg
gcaaggagtcctaacgttttcagggagaaaagcatgcagaacagatatgtacagagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aactaccaacaaaccactatctcacacagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgcccca
cagagtcctgcaggatacatgccatattcccatccttcaagctacaccacacatccacag
atgcaacaagcatcggtatcaagtcctattgttgccggtggcttgagaaacatccacgat
aacaaagtttctggtccattatctggcaactcagctaatcatcatgctgataaccctaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtagtgatgatggcgat
tcttcagcaatgaggaatgctgcgtcttttcccttaaggtctccgcagcccgtgtgttct
cctgctggaagtgacggaactcctaaaggatcaagaccacctttaatcctacagtctcag
tctttaccttgttcatcacctcgagatgttcctccagatatcttgctagattctccagaa
agaaaacaaaaaaagcaaaagaaaatgaaattaggcaaggatgaaaaagaccagaacgag
aaagctgcaatgtatgatataattagctctccaaccaaggactccactaaacttacgtta
agactttctcgtgtaagatcgtcagatatggaccagcaagaggatatgctatctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtatccaggacagact
tcaaaaacacccattactccacaggacgtaaaccgctcacttaatgctgctcaatgcttg
tcgcagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctacaaaacaaccacagacttctgtagtacagaatcagcaacaggtatca
cagcaggggccgatatatgacgaagtcgaattggacgcattggcagaaattgaacggata
gagagagaatcagccattgaaagggagcgcttctcaaaggaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aacagaccagcttctcaggagacgggttccacgggaaatgggtcaaggccagcattaatg
gttagcattgaccttcatcaggcaggaagagcggactctcaggcttctctaactcaggat
tcagacaacataaaaaagcctgaagaaaccaaacagtgtaatgatgcacccatttctgtt
cttcaggaagatagtgttggaagtcttaagtctataccagaaaaccatcccgagactcct
aaaaacaaatctgatcctgagctttcaaaaagtgaaatgaaacaaaatgaaagtaggtta
tcagaatctaaaccaaatgaaaaccaactgggggagtcaaagtcaaatgaaagtaagtta
gaaaccaaaactgagacccagacagaagaacttaagcagagtgagaataaaacgacagag
tccaaacagagtgagagtgctgtagttgagcctaaacagaatgaaaatagactgtgtgac
acaaaaccaaatgacaacaaacaaaacaacaccaggtcagaaaacacaaaggcaagacct
gaaaccccaaagcagaaagctgaaagccggcctgaaaccccaaagcaaaagagtgaaggc
cggcctgaaaccccaaaacagaagggtgatggacgacctgagactccgaagcaaaagagt
gaaggccggcccgaaactccaaagcagaaaggtgaaggccggcctgaaaccccaaaacat
aggcacgaaaataggaaggattctggaaagccatcaacagagaagaaacccgatgtgtct
aagcataaacaggatatcaaatctgactcatctcgcttaaaatcagaaagagctgaggcc
ttaaagcagagacctgatgggcgatcagagtccctaagacgtgaccatgatagtaaacaa
aagtcagatgacaggggtgagtcagaacgacatcggggtgatcagtcaagggttcgaaga
ccagaaacattgagatcttctagtagaaatgaacatagcactaaatcagatggttcaaaa
actgaaaagctagaaagaaaacacaggcatgaatcaggggactcacgggacagaccttct
ggggaacaaaaatcaagaccagacagtcctcgtgtaaaacaaggagatactaataaatca
agacctggttttaagtcaccaaatagtaaagatgacaaaaggacagagggtaacagaagt
aaagtagacagtaataaagcgcacactgataataaggctgaatttccaagctatttgttg
ggggggaggtctagtgcattgaaaaatttcgtcattccaaaaatcaagagggataaagat
ggcaacataactcaggaaactaagaagatggacatgaaaggggagcagaaggacaaggta
gaaaaaatgggattagttgaagacctaaacaaaggagctaagcctgtagtcgttctgcaa
aaactatcgctggatgatgtccagaagctaattaaagacagagaggaaaaatcacgaagt
tcccttaagtctcttaagaataagccatcaaagtcaaataaaggtagtatagatcaatca
gtgttaaaagaattgccccctgaactcctggcagaaattgaatctaccatgccactttgt
gaacgtgtgaaaatgaacaaacgcaagcgtagcacagttaatgaaaagccaaaatatgct
gaaatcagttcagatgaagataatgatagtgatgaagcttttgaatcctctaggaaacgg
cataaaaaagatgacgataaagcttgggaatacgaagagcgtgacagaagaagctctggg
gatcataggagaagtggccactcccatgatggaaggaggagttcgggtggcgggcgttac
cgaaaccgaagtccgtccgactctgacatggaagattactctcctcctcccagccttagt
gaggttgctagaaaaatgaagaaaaaagaaaaacaaaagaaaaggaaagcttatgagcca
aaactaacacccgaagaaatgatggattcttcaacttttaagagatttacagcctcaata
gagaatattttggataatttagaagatatggattttactgcatttggtgatgatgatgaa
attcctcaggaactgcttttaggaaaacatcagcttaatgaacttgggagtgaatccgct
aaaattaaagccatgggtataatggacaagctttcaactgacaaaactgtgaaagtccta
aatatattagagaagaatattcaggacggatcaaagctttctactttgttaaatcataac
aatgacactgaagaagaagaaagattgtggagagacctaattatggaaagagttacaaag
tcagcagatgcctgtcttactactatcaacattatgacatctcctaacatgcccaaagct
gtctatattgaagatgtaattgaaagagttatacagtacacgaaatttcacttacagaac
acactctatccccagtacgaccctgtttacagactagatccacatggaggagggttatta
agttcaaaggccaaacgggctaaatgttctacacataagcagagggtaatagtaatgctc
tataacaaagtctgtgacatcgtcagcagtctgtcagagttgctggagatccagctcctt
accgacaccacgattcttcaggtttcctcaatgggaataacaccattttttgtggaaaat
gtcagtgagctacagttgtgtgccattaagttagtcaccgcagtattttcaagatatgaa
aagcataggcagttaatattggaagaaatttttacatcacttgcaagattaccaactagc
aagagaagtttaaggaatttcaggttaaacagtagtgatgtggatggagagcccatgtat
attcagatggttacagcactagttttacagcttattcagtgtgtcgttcacttaccatca
tcagagaaggatcctaactcagaagaagactccaacaaaaaggttgatcaggatgttgtc
attactaactcttatgaaacagctatgagaacagcccaaaactttctttccatcttcctt
aaaaaatgtggtagtaaacaaggtgaagaagattacagaccactttttgaaaattttgtt
caagaccttctttcaacagtcaataagcccgagtggccagctgctgaactactccttagt
ttgttagggagactgttggttcatcagttcagtaataagtcaacagaaatggctttaaga
gtggcatctcttgattaccttgggactgttgctgcacggctgagaaaagatgctgttacc
agcaagatggatcaagggtctatagaacgaattttaaaacaggtgtctggaggagaagat
gaaatccagcagctgcagaaggcattgcttgattatttggatgagaacactgagactgac
ccttcactggtgttttctcgtaaattctatatagcccagtggttccgtgacacaactctg
gaaacagaaaaagcaatgaaatcacaaaaagatgaagaatcatctgatggggcgcatcat
gcaaaagaaattgagacaactggtcagataatgcatcgagccgagagccggaaaaggttt
ctgagaagcattatcaaaaccacaccttctcagttcagcacattaaagatgaactctgat
actgtggactatgatgatgcgtgcttgattgttcgatatttggcctctatgaggccgttt
gcccagagctttgatatttatttgacacagatactacgagttctcggtgaaaatgcaatt
gccgttcgaacaaaagccatgaagtgtttgtctgaggttgttgctgtagaccccagtatt
ctagcaaggcttgacatgcagcgcggagttcatgggcgattaatggataactccactagt
gttcgagaggcagccgtggaattactaggtcgatttgtcctttgtcgacctcagcttgct
gagcagtattatgatatgctgattgaaagaatattggatactggtatcagtgtcaggaaa
agagtaataaagattttaagagacatctgtattgaacaaccaacatttccaaaaattaca
gaaatgtgtgtaaagatgattcggagagtcaatgatgaagagggcattaagaaattagta
aatgaaacattccagaagctctggtttactccaactccacataatgacaaagaagcaatg
acaaggaaaattttaaacatcactgatgtggttgcagcatgtagagatactggatatgac
tggtttgagcaactccttcaaaatttgttgaagtctgaagaggattcctcatataaacct
gtgaagaaagcttgtactcaacttgttgataacctagttgagcatattcttaaatatgag
gaatctctagctgactcagacaataaaggtgtaaattctggaagattggtagcatgtata
accactttgttcttattcagcaaaataagaccccaactcatggttaaacatgccatgact
atgcagccgtaccttaccactaaatgtagtacgcaaaatgacttcatggtcatctgcaat
gttgcaaaaatccttgagttagttgtgccactgatggagcacccaagtgagactttcctt
gccactattgaagaagacctgatgaagctcatcatcaaatacggcatgactgtagtgcaa
cattgtgtgagctgtcttggggccgttgtaaataaagtgacccagaattttaagtttgtg
tgggcctgtttcaatagatactacggtgccatttcaaaattaaaaagtcagcaccaagaa
gacccaaataacacttcacttttaacaaataagccagcgcttcttaggtccctcttcact
gttggagcactttgccggcattttgattttgatctggaagattttaaaggcaacagtaag
gttaacataaaggataaagtacttgagctgttgatgtattttacaaaacactcagacgaa
gaagtacaaacaaaagccatcattggtctaggatttgcctttatacagcatccaagtcta
atgttcgagcaagaagtgaagaatctgtataatagtattttatctgataagaactcctca
gtgaatttaaaaatacaagtgttaaaaaacctccagacttacctacaagaagaagataca
cgaatgcagcaagcagacagagactggaagaaagttgcaaaacaggaagacttgaaagaa
atgggagatgtgtcctcggggatgagcagctccatcatgcagctttacctcaagcaggtg
ctggaggccttcttccacacccagtcaagtgtgcgccacttcgccctgaatgtcatcgcc
ctgacgctaaaccaaggcctcatccatccggttcagtgtgttccctacttaattgccatg
ggcacagatccagaacctgctatgcggaacaaggctgatcagcagcttgtggaaatagac
aaaaagtatgctggattcatccatatgaaagccgtggctggtatgaagatgtcctaccag
gtacagcaggcgatcaacacgtgcctaaaagatcccgtaaggggtttcagacaagacgag
tcctccagtgctttgtgctcacacctttactccatgatccgtggaaaccgccaacacaga
cgcgcctttcttatttctttactcaacctctttgatgacacagcaaaaacagaagtgact
atgctcttgtacatagcagacaatctagcctgttttccataccagactcaggaagaacca
ctgtttataatgcaccacatagacatcacgctttctgtttccggtagtaacctattgcag
tcattcaaggagtctatggtaaaagacaaaaggaaagagagaaaaacatcccctgctaaa
gagaacgagtccagtgagagtgaagaagaagtgtgcaggccccggaagtctcgaaagcgg
gtagattcagagtcagactcagactcagaagatgacgtaaattcagtgatgaaatgtttg
ccggaaaattcagcccctttgattgaatttgcaaatgtttcccagggtattttattactt
cttatgttaaagcaacacctgaagaatctctgtggattttctgacagtaaaattcaaaaa
tattctccatctgaatctgcaaaagtgtatgataaagccattaatcggaaaacaggggtt
cattttcatcccaaacaaacactggacttcctgcgaagtgacatggctaactccaaactg
acggaagatgtgaagaggagcatcgtaaggcagtacctagactttaaacttctcatggaa
catctagaccctgatgaagaagaggaggaaggagaggtgtcggctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaataacccagcagcagac
acagaagatgaggagagtgatggggaggatagaggaggaggcacttcagggtcattgaga
aggtcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgac
gtcatggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacagattgcaaga
gtagtgcagagaaccagcagtggcgtcagtgttcagtggatggcaggctcctacagcggc
tcctggacggaggccaagcgccgcgatggccgcaaactggtgccttgggtagacacgatt
aaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaat
aaagttgttcagactttacgatccctgtatgccgccaaggatgggacttccagctaa

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