Rattus norvegicus (rat): 294787
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Entry
294787 CDS
T01003
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
294787 (Nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
294787 (Nipbl)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
294787 (Nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
294787
NCBI-ProteinID:
XP_038959465
RGD:
1306393
Ensembl:
ENSRNOG00000056907
LinkDB
All DBs
Position
2:complement(59126676..59314841)
Genome browser
AA seq
2798 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNSRIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSAMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
SLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQNEKAAMYDIISSPTKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRSLNAAQCL
SQQEQTAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRADSQASLTQDSDNIKKPEETKQCNDAPISVLQEDSVGSLKSIPENHPETP
KNKSDPELSKSEMKQNESRLSESKPNENQLGESKSNESKLETKTETQTEELKQSENKTTE
SKQSESAVVEPKQNENRLCDTKPNDNKQNNTRSENTKARPETPKQKAESRPETPKQKSEG
RPETPKQKGDGRPETPKQKSEGRPETPKQKGEGRPETPKHRHENRKDSGKPSTEKKPDVS
KHKQDIKSDSSRLKSERAEALKQRPDGRSESLRRDHDSKQKSDDRGESERHRGDQSRVRR
PETLRSSSRNEHSTKSDGSKTEKLERKHRHESGDSRDRPSGEQKSRPDSPRVKQGDTNKS
RPGFKSPNSKDDKRTEGNRSKVDSNKAHTDNKAEFPSYLLGGRSSALKNFVIPKIKRDKD
GNITQETKKMDMKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREEKSRS
SLKSLKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYA
EISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHDGRRSSGGGRY
RNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASI
ENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVL
NILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNMPKA
VYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQRVIVML
YNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYE
KHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPS
SEKDPNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFV
QDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVT
SKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTL
ETEKAMKSQKDEESSDGAHHAKEIETTGQIMHRAESRKRFLRSIIKTTPSQFSTLKMNSD
TVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSI
LARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRK
RVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAM
TRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYE
ESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICN
VAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNFKFV
WACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKGNSK
VNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNSILSDKNSS
VNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQV
LEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEID
KKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNRQHR
RAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQ
SFKESMVKDKRKERKTSPAKENESSESEEEVCRPRKSRKRVDSESDSDSEDDVNSVMKCL
PENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGV
HFHPKQTLDFLRSDMANSKLTEDVKRSIVRQYLDFKLLMEHLDPDEEEEEGEVSASTNAR
NKAITSLLGGGSPKNNPAADTEDEESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVD
VMDVIAICCPKYKDRPQIARVVQRTSSGVSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTI
KESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccataactactcttgcggggatcgctagtcttacg
gacctcctgaaccagctgcctctcccatctcctttacctgctacaactacaaagagcctc
ctcttcaactcccggatagcagaagaggtgaactgccttttggcctgtagggatgacaat
ttggtttcacagcttgtccatagtctcaaccaggtatcaacagatcacatagaactgaaa
gataaccttggcagtgatgatcccgaaggcgatataccagtcctgttgcaggccgtcctg
gcaaggagtcctaacgttttcagggagaaaagcatgcagaacagatatgtacagagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aactaccaacaaaccactatctcacacagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgcccca
cagagtcctgcaggatacatgccatattcccatccttcaagctacaccacacatccacag
atgcaacaagcatcggtatcaagtcctattgttgccggtggcttgagaaacatccacgat
aacaaagtttctggtccattatctggcaactcagctaatcatcatgctgataaccctaga
catggctcaagtgacgactacctacacatggtgcacaggctaagtagtgatgatggcgat
tcttcagcaatgaggaatgctgcgtcttttcccttaaggtctccgcagcccgtgtgttct
cctgctggaagtgacggaactcctaaaggatcaagaccacctttaatcctacagtctcag
tctttaccttgttcatcacctcgagatgttcctccagatatcttgctagattctccagaa
agaaaacaaaaaaagcaaaagaaaatgaaattaggcaaggatgaaaaagaccagaacgag
aaagctgcaatgtatgatataattagctctccaaccaaggactccactaaacttacgtta
agactttctcgtgtaagatcgtcagatatggaccagcaagaggatatgctatctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtatccaggacagact
tcaaaaacacccattactccacaggacgtaaaccgctcacttaatgctgctcaatgcttg
tcgcagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctacaaaacaaccacagacttctgtagtacagaatcagcaacaggtatca
cagcaggggccgatatatgacgaagtcgaattggacgcattggcagaaattgaacggata
gagagagaatcagccattgaaagggagcgcttctcaaaggaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aacagaccagcttctcaggagacgggttccacgggaaatgggtcaaggccagcattaatg
gttagcattgaccttcatcaggcaggaagagcggactctcaggcttctctaactcaggat
tcagacaacataaaaaagcctgaagaaaccaaacagtgtaatgatgcacccatttctgtt
cttcaggaagatagtgttggaagtcttaagtctataccagaaaaccatcccgagactcct
aaaaacaaatctgatcctgagctttcaaaaagtgaaatgaaacaaaatgaaagtaggtta
tcagaatctaaaccaaatgaaaaccaactgggggagtcaaagtcaaatgaaagtaagtta
gaaaccaaaactgagacccagacagaagaacttaagcagagtgagaataaaacgacagag
tccaaacagagtgagagtgctgtagttgagcctaaacagaatgaaaatagactgtgtgac
acaaaaccaaatgacaacaaacaaaacaacaccaggtcagaaaacacaaaggcaagacct
gaaaccccaaagcagaaagctgaaagccggcctgaaaccccaaagcaaaagagtgaaggc
cggcctgaaaccccaaaacagaagggtgatggacgacctgagactccgaagcaaaagagt
gaaggccggcccgaaactccaaagcagaaaggtgaaggccggcctgaaaccccaaaacat
aggcacgaaaataggaaggattctggaaagccatcaacagagaagaaacccgatgtgtct
aagcataaacaggatatcaaatctgactcatctcgcttaaaatcagaaagagctgaggcc
ttaaagcagagacctgatgggcgatcagagtccctaagacgtgaccatgatagtaaacaa
aagtcagatgacaggggtgagtcagaacgacatcggggtgatcagtcaagggttcgaaga
ccagaaacattgagatcttctagtagaaatgaacatagcactaaatcagatggttcaaaa
actgaaaagctagaaagaaaacacaggcatgaatcaggggactcacgggacagaccttct
ggggaacaaaaatcaagaccagacagtcctcgtgtaaaacaaggagatactaataaatca
agacctggttttaagtcaccaaatagtaaagatgacaaaaggacagagggtaacagaagt
aaagtagacagtaataaagcgcacactgataataaggctgaatttccaagctatttgttg
ggggggaggtctagtgcattgaaaaatttcgtcattccaaaaatcaagagggataaagat
ggcaacataactcaggaaactaagaagatggacatgaaaggggagcagaaggacaaggta
gaaaaaatgggattagttgaagacctaaacaaaggagctaagcctgtagtcgttctgcaa
aaactatcgctggatgatgtccagaagctaattaaagacagagaggaaaaatcacgaagt
tcccttaagtctcttaagaataagccatcaaagtcaaataaaggtagtatagatcaatca
gtgttaaaagaattgccccctgaactcctggcagaaattgaatctaccatgccactttgt
gaacgtgtgaaaatgaacaaacgcaagcgtagcacagttaatgaaaagccaaaatatgct
gaaatcagttcagatgaagataatgatagtgatgaagcttttgaatcctctaggaaacgg
cataaaaaagatgacgataaagcttgggaatacgaagagcgtgacagaagaagctctggg
gatcataggagaagtggccactcccatgatggaaggaggagttcgggtggcgggcgttac
cgaaaccgaagtccgtccgactctgacatggaagattactctcctcctcccagccttagt
gaggttgctagaaaaatgaagaaaaaagaaaaacaaaagaaaaggaaagcttatgagcca
aaactaacacccgaagaaatgatggattcttcaacttttaagagatttacagcctcaata
gagaatattttggataatttagaagatatggattttactgcatttggtgatgatgatgaa
attcctcaggaactgcttttaggaaaacatcagcttaatgaacttgggagtgaatccgct
aaaattaaagccatgggtataatggacaagctttcaactgacaaaactgtgaaagtccta
aatatattagagaagaatattcaggacggatcaaagctttctactttgttaaatcataac
aatgacactgaagaagaagaaagattgtggagagacctaattatggaaagagttacaaag
tcagcagatgcctgtcttactactatcaacattatgacatctcctaacatgcccaaagct
gtctatattgaagatgtaattgaaagagttatacagtacacgaaatttcacttacagaac
acactctatccccagtacgaccctgtttacagactagatccacatggaggagggttatta
agttcaaaggccaaacgggctaaatgttctacacataagcagagggtaatagtaatgctc
tataacaaagtctgtgacatcgtcagcagtctgtcagagttgctggagatccagctcctt
accgacaccacgattcttcaggtttcctcaatgggaataacaccattttttgtggaaaat
gtcagtgagctacagttgtgtgccattaagttagtcaccgcagtattttcaagatatgaa
aagcataggcagttaatattggaagaaatttttacatcacttgcaagattaccaactagc
aagagaagtttaaggaatttcaggttaaacagtagtgatgtggatggagagcccatgtat
attcagatggttacagcactagttttacagcttattcagtgtgtcgttcacttaccatca
tcagagaaggatcctaactcagaagaagactccaacaaaaaggttgatcaggatgttgtc
attactaactcttatgaaacagctatgagaacagcccaaaactttctttccatcttcctt
aaaaaatgtggtagtaaacaaggtgaagaagattacagaccactttttgaaaattttgtt
caagaccttctttcaacagtcaataagcccgagtggccagctgctgaactactccttagt
ttgttagggagactgttggttcatcagttcagtaataagtcaacagaaatggctttaaga
gtggcatctcttgattaccttgggactgttgctgcacggctgagaaaagatgctgttacc
agcaagatggatcaagggtctatagaacgaattttaaaacaggtgtctggaggagaagat
gaaatccagcagctgcagaaggcattgcttgattatttggatgagaacactgagactgac
ccttcactggtgttttctcgtaaattctatatagcccagtggttccgtgacacaactctg
gaaacagaaaaagcaatgaaatcacaaaaagatgaagaatcatctgatggggcgcatcat
gcaaaagaaattgagacaactggtcagataatgcatcgagccgagagccggaaaaggttt
ctgagaagcattatcaaaaccacaccttctcagttcagcacattaaagatgaactctgat
actgtggactatgatgatgcgtgcttgattgttcgatatttggcctctatgaggccgttt
gcccagagctttgatatttatttgacacagatactacgagttctcggtgaaaatgcaatt
gccgttcgaacaaaagccatgaagtgtttgtctgaggttgttgctgtagaccccagtatt
ctagcaaggcttgacatgcagcgcggagttcatgggcgattaatggataactccactagt
gttcgagaggcagccgtggaattactaggtcgatttgtcctttgtcgacctcagcttgct
gagcagtattatgatatgctgattgaaagaatattggatactggtatcagtgtcaggaaa
agagtaataaagattttaagagacatctgtattgaacaaccaacatttccaaaaattaca
gaaatgtgtgtaaagatgattcggagagtcaatgatgaagagggcattaagaaattagta
aatgaaacattccagaagctctggtttactccaactccacataatgacaaagaagcaatg
acaaggaaaattttaaacatcactgatgtggttgcagcatgtagagatactggatatgac
tggtttgagcaactccttcaaaatttgttgaagtctgaagaggattcctcatataaacct
gtgaagaaagcttgtactcaacttgttgataacctagttgagcatattcttaaatatgag
gaatctctagctgactcagacaataaaggtgtaaattctggaagattggtagcatgtata
accactttgttcttattcagcaaaataagaccccaactcatggttaaacatgccatgact
atgcagccgtaccttaccactaaatgtagtacgcaaaatgacttcatggtcatctgcaat
gttgcaaaaatccttgagttagttgtgccactgatggagcacccaagtgagactttcctt
gccactattgaagaagacctgatgaagctcatcatcaaatacggcatgactgtagtgcaa
cattgtgtgagctgtcttggggccgttgtaaataaagtgacccagaattttaagtttgtg
tgggcctgtttcaatagatactacggtgccatttcaaaattaaaaagtcagcaccaagaa
gacccaaataacacttcacttttaacaaataagccagcgcttcttaggtccctcttcact
gttggagcactttgccggcattttgattttgatctggaagattttaaaggcaacagtaag
gttaacataaaggataaagtacttgagctgttgatgtattttacaaaacactcagacgaa
gaagtacaaacaaaagccatcattggtctaggatttgcctttatacagcatccaagtcta
atgttcgagcaagaagtgaagaatctgtataatagtattttatctgataagaactcctca
gtgaatttaaaaatacaagtgttaaaaaacctccagacttacctacaagaagaagataca
cgaatgcagcaagcagacagagactggaagaaagttgcaaaacaggaagacttgaaagaa
atgggagatgtgtcctcggggatgagcagctccatcatgcagctttacctcaagcaggtg
ctggaggccttcttccacacccagtcaagtgtgcgccacttcgccctgaatgtcatcgcc
ctgacgctaaaccaaggcctcatccatccggttcagtgtgttccctacttaattgccatg
ggcacagatccagaacctgctatgcggaacaaggctgatcagcagcttgtggaaatagac
aaaaagtatgctggattcatccatatgaaagccgtggctggtatgaagatgtcctaccag
gtacagcaggcgatcaacacgtgcctaaaagatcccgtaaggggtttcagacaagacgag
tcctccagtgctttgtgctcacacctttactccatgatccgtggaaaccgccaacacaga
cgcgcctttcttatttctttactcaacctctttgatgacacagcaaaaacagaagtgact
atgctcttgtacatagcagacaatctagcctgttttccataccagactcaggaagaacca
ctgtttataatgcaccacatagacatcacgctttctgtttccggtagtaacctattgcag
tcattcaaggagtctatggtaaaagacaaaaggaaagagagaaaaacatcccctgctaaa
gagaacgagtccagtgagagtgaagaagaagtgtgcaggccccggaagtctcgaaagcgg
gtagattcagagtcagactcagactcagaagatgacgtaaattcagtgatgaaatgtttg
ccggaaaattcagcccctttgattgaatttgcaaatgtttcccagggtattttattactt
cttatgttaaagcaacacctgaagaatctctgtggattttctgacagtaaaattcaaaaa
tattctccatctgaatctgcaaaagtgtatgataaagccattaatcggaaaacaggggtt
cattttcatcccaaacaaacactggacttcctgcgaagtgacatggctaactccaaactg
acggaagatgtgaagaggagcatcgtaaggcagtacctagactttaaacttctcatggaa
catctagaccctgatgaagaagaggaggaaggagaggtgtcggctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaataacccagcagcagac
acagaagatgaggagagtgatggggaggatagaggaggaggcacttcagggtcattgaga
aggtcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgac
gtcatggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacagattgcaaga
gtagtgcagagaaccagcagtggcgtcagtgttcagtggatggcaggctcctacagcggc
tcctggacggaggccaagcgccgcgatggccgcaaactggtgccttgggtagacacgatt
aaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaat
aaagttgttcagactttacgatccctgtatgccgccaaggatgggacttccagctaa
DBGET
integrated database retrieval system