Rattus norvegicus (rat): 294975
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Entry
294975 CDS
T01003
Symbol
Exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
294975 (Exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
294975 (Exosc9)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
294975 (Exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
294975
NCBI-ProteinID:
NP_001020577
RGD:
1307888
Ensembl:
ENSRNOG00000014674
UniProt:
Q4QR75
A6IHY2
LinkDB
All DBs
Position
2:121344154..121355110
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AA seq
437 aa
AA seq
DB search
MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS
CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTES
LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGI
MLLKDQVFRCSKIAGVKVAEITELIQKALENDQRVRKEGGKFGFAESIANQRITAFKMEK
APIDTSNIEEKAEEIIAEAEPPPEVVSKPVLWTPGTAQIGEGIENSWGDLEDSEKEEEEE
GGIDETVILDDTKMDTGEVSDIGSQGAPIVLSDSEEEEMIILEPEKSPKKIRAQTSANQK
APSKSQGKRRKKKRTAN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacgccgctttccaactgcgagcgccgcttcctgctccgtgcaattgaggag
aagaagcggctggatggcagacaaacctatgattacaggaacatcaggatctcattcgga
acggattatggatgctgtattgtagaactggggaaaacaagagtcctcggacaggtttcc
tgtgaacttgtttctccaaagctcaatagggcaacagaaggtattctcttttttaacctt
gagctttctcagatggctgctccagcttttgaacctggcaggcagtcagatctcttggtg
aagctgaatcggctcttggaaaggtgtctaagaaattcaaagtgcatagacactgaatct
ctctgtgttgtcgctggtgaaaaggtttggcagatacgtgtagacctacatttattaaat
catgatggaaatattattgatgctgctagcattgctgcaatcgtggccttgtgtcacttc
cgaagacccgatgtctctgtccaaggagaagaagtaacattgtatacccctgaggagcgt
gatcctgtgcctttgagcatacaccatatgcccatctgtgtcagttttgctttcttccag
caaggaacatacttattggtggaccccaatgagcgtgaagagcgagtgatggatggcctg
ctggtgatcgccatgaacaagcatcgagaaatctgtacgattcagtctagtggtgggata
atgctgctcaaagaccaggttttcaggtgcagtaaaatagctggtgtgaaagtagcagaa
atcacagagctaatacagaaagctttggaaaatgaccagagagttaggaaagaaggtgga
aaatttggctttgcagagtctatagcaaatcagagaatcacagcatttaaaatggagaag
gcccctattgatacctccaacatagaagagaaagcagaagaaattattgcggaagccgaa
cctcctccagaggttgtttctaaacctgtgctgtggactcctggaactgcccagattgga
gagggaatagaaaactcctggggtgaccttgaagattctgagaaggaagaggaggaggaa
ggtggcattgatgaaactgtcattcttgatgatacaaagatggacacgggagaagtttct
gatattgggagccaaggtgcccctatagtgctatcagatagtgaagaagaagaaatgatt
attttggagccagagaagagtccaaaaaaaataagagctcagaccagtgcaaaccagaag
gcaccaagtaaaagtcaagggaaaaggaggaaaaagaagagaactgctaattaa
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