Rattus norvegicus (rat): 295010
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Entry
295010 CDS
T01003
Symbol
Pabpc4l
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03015
mRNA surveillance pathway
rno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
295010 (Pabpc4l)
09123 Folding, sorting and degradation
03018 RNA degradation
295010 (Pabpc4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
295010 (Pabpc4l)
03041 Spliceosome [BR:
rno03041
]
295010 (Pabpc4l)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
295010 (Pabpc4l)
mRNA cycle factors
Stress granule specific factors
295010 (Pabpc4l)
Spliceosome [BR:
rno03041
]
Complex C
Other components
Complex C specific factors
295010 (Pabpc4l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
RRM_Nup35
RRM_7
RRM_10
RRM_MUD2_C
RRM_occluded
Nup35_RRM_2
Ham1p_like
Taeniidae_ag
RB_A
Motif
Other DBs
NCBI-GeneID:
295010
NCBI-ProteinID:
NP_001099899
RGD:
1559517
Ensembl:
ENSRNOG00000029749
UniProt:
A0ABK0L6B4
LinkDB
All DBs
Position
2:complement(131743939..131745929)
Genome browser
AA seq
370 aa
AA seq
DB search
MSVETKYRAASLYVGDLHEDVTEDLLFRKFNTVGPVLSIRICRDLISHRSLGYGYVNFLQ
VGDAQKALETMNFDLIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDKSIDNKTLYEHFSP
FGKIMSSKVMTDEEGSKGYGFVHYQDQRAADRAIEEMNGKLLRDSTLFVARFKSRKDREA
ELREKPAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKDASGKSKRFGFVSFDSH
KAAKNAVEDMNGRDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNL
DDTIDDETLRKEFSVFGSICRVKVMQEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGSK
PLNIALGQKH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggaaactaagtaccgtgcggcttccctgtatgtgggtgacctccacgaagat
gtcacggaggaccttctgttcaggaagttcaacacagtaggacctgtgttgtccatccga
atctgcagggacctgatttcccatcgttcactaggctacggctatgtcaattttctccag
gtgggtgatgcccagaaggccctagaaactatgaactttgacttgatcaaaggtaaatcc
atccgtctcatgtggtctcaacgggatgcttgcctaaggaagtcgggaatcgggaatgtg
tttatcaagaatctggacaaatccattgacaacaaaaccttgtatgaacacttctcacct
ttcggaaagatcatgtcctccaaggtgatgactgatgaagaaggctccaagggttacggc
ttcgtgcactaccaggaccagagagcagctgacagggccattgaggagatgaatgggaag
ctgctgagggacagcactttgttcgtggccagattcaaaagccgtaaggatcgggaggct
gagctcagagagaaacccgccgaattcactaatgtgtatatcaaaaattttggggatgac
atggacgatgagagcctcaggtcagttttcagcaaatacggccaaactttgagcgttaag
gtgatgaaagatgcctctggcaagtccaaacgctttggatttgtgagctttgatagccac
aaggctgcgaaaaacgcagttgaggacatgaatgggcgggacataaacgggcagacaatt
tttgtaggcagagcccagaagaaggtggaaagacaggcggagttaaaggaaatgtttgag
caaatgaaaaaggaaagaatccgtgcccgccaggcagctaagctctacattaagaacctg
gatgacaccatcgatgatgaaacactgcgcaaggaattttctgtctttgggtccatttgc
agagttaaagtgatgcaggaagcagggcagagcaaagggtttggcttgatctgcttcttc
tccccggaggcagctgctaaagcaatggctgagatgaatggccgcatcctgggctccaaa
cccctcaacattgcactgggtcagaagcactga
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