Rattus norvegicus (rat): 29559
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Entry
29559 CDS
T01003
Symbol
Grik1
Name
(RefSeq) glutamate receptor ionotropic, kainate 1 isoform 1 precursor
KO
K05201
glutamate receptor, ionotropic kainate 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04080
Neuroactive ligand-receptor interaction
rno04082
Neuroactive ligand signaling
rno04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
29559 (Grik1)
04082 Neuroactive ligand signaling
29559 (Grik1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
29559 (Grik1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
29559 (Grik1)
Ion channels [BR:
rno04040
]
Ligand-gated channels
Glutamate (ionotropic)
29559 (Grik1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
29559
NCBI-ProteinID:
NP_001104587
RGD:
2732
Ensembl:
ENSRNOG00000001575
UniProt:
P22756
A6JL86
F1M7M9
Structure
PDB
PDBj
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All DBs
Position
11:complement(40655974..41056966)
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AA seq
949 aa
AA seq
DB search
MERSTVLIQPGLWTRDTSWTLLYFLCYILPQTSPQVLRIGGIFETVENEPVNVEELAFKF
AVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ
SICNALEVPHIQTRWKHPSVDSRDLFYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS
TGLIRLQELIKAPSRYNIKIKIRQLPPANKDAKPLLKEMKKSKEFYVIFDCSHETAAEIL
KQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSME
RLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRF
MNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGI
WNSNSGLNMTDGNRDRSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCL
DLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREK
VIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT
PYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTL
IIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKM
WAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG
VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFI
VLAAGLVLSVFVAIGEFLYKSRKNNDVEQKGKSSRLRFYFRNKVRFHGSKKESLGVEKCL
SFNAIMEELGISLKNQKKLKKKSRTKGKSSFTSILTCHQRRTQRKETVA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagcacagtccttatccaacccgggctctggaccagggacaccagctggaca
ctcctctatttcctgtgctacatcctccctcagacctcccctcaagtgctcaggatcgga
gggatttttgaaactgtggaaaatgaacctgttaatgttgaagaattagctttcaagttt
gcagtcaccagtattaaccgaaaccgaaccttgatgcccaataccacattaacctatgac
atccagagaattaatctttttgatagttttgaagcctcccgaagagcatgcgaccagctg
gctctcggggtggccgcactcttcggcccttcccacagctcctccgtcagtgctgtacag
tctatttgcaatgctctggaagttccacacattcagactcgctggaaacacccttccgtg
gacagcagagacctattttatatcaacctctacccggactatgcggctatcagcagggcg
gtcctggatttggtcctctattacaactggaaaacagtgacggtggtgtatgaagacagc
acaggtctaattcgtctgcaagagctcatcaaagctccctccagatacaacattaaaatc
aaaatccgccagcttccccctgcgaataaagacgccaaacctctgctcaaggagatgaag
aaaagcaaagagttctatgtgatatttgattgttcgcacgaaacagctgcggaaattctt
aagcagattttgttcatgggcatgatgactgaatattatcactacttcttcacaaccctg
gacttgtttgctttagatctggaactctataggtacagcggtgtaaatatgactggattt
cggttgctgaatattgacaaccctcacgtgtcatccatcattgagaagtggtccatggag
aggttgcaggccccgcccagacccgagactggtcttctggatggcatgatgacaactgaa
gcagcgctgatgtacgatgctgtgtacatggtagccattgcgtcccaccgtgcctctcag
ctgaccgtcagctccctgcagtgccatcgacataagccatggcgccttggacccagattt
atgaacctcatcaaagaggctcggtgggacggcttgactgggcggatcaccttcaataag
accgatggcttgagaaaggattttgacctggacattatcagtctcaaagaggaaggaact
gaaaaggcctctggtgaagtgtctaaacacttgtataaagtgtggaagaagattgggatt
tggaactccaacagtgggctgaacatgacggatggcaacagagacaggtccaacaatatc
acggactcgctggctaaccgcacactcattgtcaccactattctggaagagccctacgtg
atgtacaggaaatccgataagcccttgtatggaaacgacaggtttgaaggatattgcctg
gatctgctgaaagaactgtccaatatcctgggttttctttacgatgttaaactggttcct
gatggcaaatatggagcacagaatgacaaaggggaatggaatgggatggtaaaagaactc
atcgaccacagagctgacctggcagtggcccctctcaccatcacatacgtacgggagaaa
gtcattgacttctccaagcccttcatgaccctgggcattagcatcctttaccggaagccc
aatggaaccaacccgggtgtcttctccttcctcaaccccctatctccggacatttggatg
tacgtgctgctcgcctgcctaggagtcagttgtgtactgtttgtgattgcgaggttcaca
ccctacgagtggtataacccccacccatgcaaccccgactcagacgtggtggaaaacaat
ttcactttgctaaatagtttctggtttggagttggagctctcatgcagcaaggatcagag
ctgatgcccaaggctctatcgaccagaatagttggaggaatatggtggtttttcacccta
atcatcatttcatcctacacggccaacctggctgccttcttgacggtagaaagaatggaa
tcccccatcgattccgcagacgatctggccaaacaaaccaagatagaatatggggcagtc
agagatggctcgacgatgaccttcttcaagaaatcaaagatctccacctatgagaaaatg
tgggctttcatgagcagtagacagcagagcgcactggttaaaaacagtgacgaggggatc
caaagggtgctcaccaccgactacgcactgctgatggagtccaccagcattgagtatgtg
acgcagaggaactgcaacctcactcagatcgggggcctcatagactccaaaggctatgga
gtggggacgcctatcggctccccttaccgggataaaattacgattgccattcttcaactg
caagaagaagggaagcttcatatgatgaaagagaagtggtggagggggaatggctgccct
gaagaagacagtaaggaagccagtgctctgggagtggaaaatatcggcggcatcttcatt
gttctggctgcaggactcgtgctttctgtgtttgtagccattggagaatttttatacaaa
tcacggaagaacaatgacgttgagcagaaaggaaagtcatcaagacttagattttatttt
aggaacaaagtaaggtttcatgggagcaaaaaagagagccttggtgtagagaagtgtctc
tctttcaatgccatcatggaagagctgggaatatccctcaagaatcagaaaaaattaaag
aaaaagtcaagaactaagggcaaatcttctttcacaagtatccttacttgtcaccagaga
cgaactcagagaaaagagacagtggcgtga
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