Rattus norvegicus (rat): 295654
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Entry
295654 CDS
T01003
Symbol
Ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
295654 (Ttc21b)
Cilium and associated proteins [BR:
rno03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
295654 (Ttc21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_TT21_C
ARM_TT21_2nd
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_1
TPR_8
TPR_12
ANAPC3
TPR_11
TPR_6
TPR_7
TPR_CcmH_CycH
TPR_17
TPR_9
TPR_21
PknG_TPR
TPR_Slam
DUF6584
SPOB_a
Tcf25
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
295654
NCBI-ProteinID:
NP_001178666
RGD:
1565122
Ensembl:
ENSRNOG00000005868
UniProt:
A0A8I6GBB8
LinkDB
All DBs
Position
3:complement(71269425..71343936)
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AA seq
1315 aa
AA seq
DB search
MDSQGLKTLINYYCQERYYHHVLLVASEGMKKYSSDPVFRFYHAYGTLMEGKAQEALREF
EAIKNKQDVSLCSLMALMYVHKMSPNPDREAILELDTKMKEQRKEAGRKALYHAGLFLWH
IGRHDKAREYIDRMSKMPHDSNEGPILKAWLDITRGKEPYAKKALRYFEEGLQDGNDIFA
LLGKVLCLEMRQNYSGALETVSQIIVNFPSFLPAFEKKMKLQLALQDWDQTVETAQRLLL
QDGHNVEALRMLALYYLCREGDIEKAAAKLENLGNALDVMEPQNAQLFYKITIAFSRTCG
RNQLILQKVQSFLEKAFSLTPQQAEIATELGYQMILQGKVKEAWKWYRTAMTLNESNISA
VTGLIRCQLIEGQLQDADQQLEFFSEFQQSMGRSAELMYLHAVLATKKNNRQEEVINLLN
DVVNTHFSHLEDLPLGIQYFEKLNPDFLLEVVNEYLNLCPIQPAGPGQPLSPVLRRCSSV
LETIIRSVPGLPQAVFLMAKVKYLSGDTEAAYNNLQHCLEHSPSYAEAHLLMAQVYLSQD
KVQLCSQSLELCLSYNFNVRDYPLYHLIKAQSQKKMGEVAEAIKTLHMAMNLPGMRRSRA
SSKSKHRSEVDGSHRLSIFLELVEVHRLNGEQHEAAKVLQDAIHEFSGTCEELRVTIANA
DLALAQGDTERALSMLRNVTTEQPYFIEAKEKMADIYLKHRKEKMLYITCYREIAERMPS
PRSFLLLGDAYMNIQEPEEAIVAYEQALNQNPKDGTLARKIGKALVKTHNYSKAITYYEA
ALKSGQQNCLCYDLAELLLRLKLYEKAEKVLQHSLAHDPVNELSALMVDGRSQVLLAKVY
SKMERPGDAIAALQQARELQARILKRVQMEQPDAVPSQRHFAAEICAEIAKHSAAQRDYE
KAITFYREALVHCETDSKIMLELAQLYLAQEDLDASLRHCALLLQRDQDNEPATMLMADL
MFRKQDYEQAVFHLQQLLERKPDNFMTLSRLIDLLRRCGKLEEVPRFFLMAEKHNSRTKL
EPGFQYCKGLHFWYTGEPNDALRHFNKARKDSDWGQNALYNMIEICLNPDNETIGGEVFE
NLNGDLGTSPEKQESVQLAVRTAEKLLKELKPQTVQGRLQLRIMENCCLMATKQKSSVEQ
ALNTFTEIAASEKDHIPALLGMATAYMILKQTPKARNQLKRIAKMTWNPIEAEELEKSWL
LLADIYIQSAKYDMAEELLKRCLCHNRSCCKAYEYMGYIMEKEQAYTDAAFNYEMAWKHS
NQTNPAVGYKLAFNYLKAKRYVDAIDVCHQVLEAHPTYPKIRKDILDKARASLRP
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggactcccaggggctgaagacactgatcaattactattgtcaagagagatactatcac
catgtgctccttgtggccagtgaagggatgaagaagtatagcagtgacccagtcttccga
ttttaccatgcctacggcacactaatggagggtaaagctcaagaagcccttcgggagttt
gaggccattaaaaataaacaagacgtgtcactgtgttccctgatggcgctgatgtatgtc
cataaaatgagccccaatccagatagagaagctatcctggaattagataccaaaatgaag
gagcaacgtaaggaagccggacgcaaagccttgtaccatgcaggcctgtttctgtggcac
attggtcgccatgataaggcgagagaatatattgacagaatgtcaaaaatgccacatgat
agcaatgagggaccgattttgaaagcatggcttgatattacaagagggaaggaaccttat
gctaaaaaagccctacggtattttgaggagggattacaagatggaaacgatatttttgct
ctgctgggtaaggtactgtgccttgagatgcgacagaattattctggagctctggagact
gtgagtcagataattgtgaacttcccgagcttccttcctgcttttgagaagaaaatgaaa
ttacaactggctttgcaggattgggatcagacggtggagacggcgcaaaggttgctgctt
caggacggccacaatgtggaggcgctgagaatgctggctttatattatctgtgtagggaa
ggggacatagagaaggctgctgccaagctggaaaatttaggaaatgcattggatgtcatg
gaaccacagaatgctcaacttttttataagattacaatagccttcagcagaacttgtgga
cgtaatcaactcattcttcaaaaagttcaaagtttcctagaaaaagcatttagtttaacc
ccccagcaagcagaaattgctacagagcttggctaccaaatgattctccaaggcaaagtc
aaggaggcctggaagtggtacaggaccgccatgacactgaacgaaagcaacatctctgcc
gtcaccggacttatccgatgtcagttaatagaaggacaattgcaagatgcagaccagcag
ttggagttcttcagtgaattccagcagtcaatgggaagatctgcggaattaatgtatttg
catgcggttcttgctaccaaaaaaaataatcgtcaggaggaagttataaatttgttgaat
gatgttgtgaacactcacttttcacacttggaagacctccctctcggcatacagtatttt
gagaagctcaaccctgacttcttactagaagttgttaacgagtatctgaatctctgtcca
attcagcctgcaggtcctgggcagcctctctccccagtcctcagacgttgttcttcagtt
ctggagacgattataagaagtgtaccaggtcttccgcaagctgtcttcctaatggccaaa
gtgaagtatctgtcaggtgacaccgaggcagcctacaacaacctgcagcactgcctggag
cacagcccctcttacgcagaggctcacctcctgatggcgcaggtgtacctatcccaagac
aaagtccagctgtgttctcagtcgcttgaactttgtctgagctacaatttcaatgtgaga
gactacccactgtaccacctaatcaaagcacagtcacagaagaaaatgggcgaggtagca
gaagcaattaaaactctgcacatggcaatgaatctaccaggaatgaggagaagtagagct
tcctcgaaatccaagcacagaagtgaagtggatgggagccatcgcttatccatctttctt
gagttggtggaggttcaccgcttaaatggagaacagcacgaggcagcaaaggttttacaa
gatgccatccatgagttttctggaacttgcgaagaattacgtgtcactattgctaatgca
gacctggctctggcccaaggagatacagaacgtgcattaagcatgctccgaaatgtcacg
accgaacagccttatttcatagaagccaaggaaaaaatggcagacatttacctgaagcat
aggaaagagaaaatgttgtacatcacttgttacagagaaattgctgaaaggatgcccagc
ccccggtctttcctgctccttggtgatgcatacatgaacattcaagagcccgaggaagcc
atagtggcctatgagcaagcattaaatcagaacccaaaagatggaacactggcgagaaaa
attgggaaagcacttgtcaaaactcacaactactcaaaggcaatcacctattatgaggct
gcgctgaaaagtggacagcagaattgcctgtgctatgacctggctgagctcctcctgaga
ctaaagttgtatgagaaagcagagaaagttcttcagcattctctagctcatgatcctgta
aatgaattgtcggctctcatggtggatgggcgttcccaagtccttctagcaaaagtttac
tctaaaatggagagacctggcgacgcgattgcagcattgcagcaggctcgagagctgcag
gctcggatactgaagcgagttcagatggagcagccagatgcggttccctcacagagacac
ttcgcagctgaaatttgtgcagagatcgcaaaacactccgctgctcagcgagactacgaa
aaggcaattacattttatagagaggccctggttcattgtgaaacggatagtaagataatg
ttggaactggcccagttatacctggcccaagaagaccttgatgcctccctccggcactgt
gcactgcttctccagagggaccaggacaacgaaccggccaccatgctgatggccgacctc
atgttcagaaaacaggactatgagcaagcagtgttccacttgcagcagcttttagaacga
aaaccagataattttatgactttgtcccgtttgattgatctcctgagaagatgtgggaaa
cttgaggaggttccgagatttttcttgatggctgagaaacacaactccagaacaaaattg
gagccaggatttcagtactgtaaaggattacatttttggtatactggagaaccaaatgat
gcccttcgacattttaataaagctcggaaagatagtgactggggtcaaaatgcactttat
aatatgatagaaatctgcttgaatccagacaatgaaactattggaggtgaagtgtttgaa
aacctgaatggagacctgggcacttccccagagaagcaggaatctgtgcagttagcagtg
aggacggcagaaaagctccttaaagaactaaaacctcagactgtccagggccgcctgcaa
ctccgcatcatggaaaactgctgcttaatggccaccaagcagaagtccagtgtggagcag
gcgctgaacaccttcaccgaaatagcagcctctgagaaggatcatatccctgctctcctg
ggaatggccaccgcttatatgatcttgaaacagaccccgaaagccagaaaccagctgaag
cggattgcaaaaatgacctggaatcctattgaagccgaggagctggagaagagctggctg
ctgcttgcggatatttatatccagtcagcaaaatatgacatggcggaagagctgctgaaa
cggtgtctgtgccataaccggtcctgctgcaaagcttatgaatatatggggtacattatg
gagaaggagcaagcatacacagatgcagccttcaactatgagatggcctggaaacatagc
aaccagacaaatcctgctgtgggatataaattggcatttaattacttaaaagcaaaacga
tatgtggatgcaattgacgtatgtcaccaggttcttgaagcacatccaacttaccccaaa
atccgaaaggatatactggataaggcccgtgcatcgttaagaccttga
DBGET
integrated database retrieval system
