Rattus norvegicus (rat): 29580 Help Entry 29580             CDS       T01003                                  Symbol Fdft1 Name (RefSeq) squalene synthase   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism rno  Rattus norvegicus (rat) Pathway rno00100   Steroid biosynthesis rno01100   Metabolic pathways Module rno_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:rno00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     29580 (Fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:rno01006]     29580 (Fdft1) Enzymes [BR:rno01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      29580 (Fdft1) Prenyltransferases [BR:rno01006]  Terpene biosynthesis   Squalene/phytoene synthase    29580 (Fdft1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Octopine_DH Motif Other DBs NCBI-GeneID:  29580 NCBI-ProteinID:  NP_062111 RGD:  61834 Ensembl:  ENSRNOG00000021314 UniProt:  Q02769 A6K6F7 LinkDB All DBs Position 15:complement(41588114..41616168) Genome browser AA seq 416 aa AA seqDB search MEFVKCLGHPEEFYNLLRFRMGGRRNFIPKMDRNSLSNSLKTCYKYLDQTSRSFAAVIQA LDGDIRHAVCVFYLILRAMDTVEDDMAISVEKKIPLLRNFHTFLYEPEWRFTESKEKHRV VLEDFPTISLEFRNLAEKYQTVIADICHRMGCGMAEFLNKDVTSKQDWDKYCHYVAGLVG IGLSRLFSASEFEDPIVGEDTECANSMGLFLQKTNIIRDYLEDQQEGRQFWPQEVWGKYV KKLEDFVKPENVDVAVKCLNELITNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL AACYNNHQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYIEEIYHRVPNSDPSASKAK QLISNIRTQSLPNCQLISRSHYSPIYLSFIMLLAALSWQYLSTLSQVTEDYVQREH NT seq 1251 nt NT seq  +upstreamnt  +downstreamnt atggagttcgtgaagtgtctaggccacccggaggagttctacaacctgctgcgattccgc atgggaggccggcggaatttcatacccaagatggaccggaactcgctcagcaacagcttg aagacttgctataagtatcttgatcagaccagtcgcagcttcgccgcggttatccaggcg ctggatggggacatacgtcatgcggtgtgtgtgttttacctgatcctccgagccatggac acagtggaggatgacatggccatcagtgtggagaagaagatcccactgctgcgaaacttt cacactttcctctatgagccggagtggcggttcaccgagagcaaggagaagcaccgagta gtgctggaggacttccccacgatctccctggagtttagaaatttggctgagaaatatcaa acagtgatcgctgacatctgtcacaggatgggatgtgggatggcagaatttctaaacaag gatgtaacctccaaacaggactgggacaagtactgtcactatgttgctggactggtggga atcggcctttctcgcctattctctgcctcagagtttgaagatcccatagttggtgaagac acagagtgtgccaattctatgggtctgtttctgcagaaaacaaatatcattcgtgattat ctggaagaccaacaagaaggaagacagttttggcctcaagaggtatggggcaaatatgtt aagaagctggaagactttgttaagccagagaacgtagatgtggccgtgaagtgcttgaat gaactcataaccaacgccctacaacacatccctgacgtcatcacctacctgtcaaggctc cggaaccaaagtgtgtttaacttctgtgccattccacaggtaatggccattgctacgctg gctgcctgttacaataaccatcaggtattcaagggagtagtgaagattcggaaggggcaa gcagttaccctcatgatggatgccaccaacatgccagctgtcaaagctatcatataccag tacatagaagagatttatcaccgggtccccaactcagacccgtcagctagcaaggccaag cagctcatctccaacatcaggacgcagagccttcccaattgccagctcatctcccgaagc cactactcccccatttacctgtccttcatcatgctcttggctgccctgagctggcagtac ttgagcactctgtcccaggtcacagaagactatgtccagagagaacactga

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