Rattus norvegicus (rat): 296199
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Entry
296199 CDS
T01003
Symbol
Snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
296199 (Snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
296199 (Snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
296199 (Snx5)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Macropinocytosis
Sorting nexins
296199 (Snx5)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
296199 (Snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Motif
Other DBs
NCBI-GeneID:
296199
NCBI-ProteinID:
NP_001386227
RGD:
1310190
Ensembl:
ENSRNOG00000006077
UniProt:
B1H267
Structure
PDB
PDBj
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All DBs
Position
3:complement(152075258..152094508)
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AA seq
404 aa
AA seq
DB search
MAAVPELLEQQEEDRSKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQS
PEFSVTRQHEDFVWLHDTLTETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEE
FAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVFLEYDQDLSVRRKNTK
EMFGGFFKSVVKSADEVLFSGVKEVDDFFEQEKNFLINYYNRIKDSCAKADKMTRSHKNV
ADDYIHTAACLHSLALEEPTVIKKYLLKVAELFEKLRKVEGRVSSDEDLKLTELLRYYML
NIEAAKDLLYRRTKALIDYENSNKALDKARLKSKDVKLAETHQQECCQKFEQLSESAKEE
LINFKRKRVAAFRKNLIEMSELEIKHARNNVSLLQSCIDLFKNN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggttcccgagttactggagcagcaggaggaggatcgcagcaagttgaggtct
gtgtctgtggacctgaatgttgacccatcgcttcagattgacatacctgatgcactcagt
gagagagataaggtcaagtttacagttcacaccaagaccacactgcccacatttcagagc
ccagagttttctgttacaaggcaacatgaagactttgtgtggctgcatgacactcttact
gaaacaacagattatgccgggcttatcatccctcctgctcctacaaagccagactttgat
ggccctcgagagaagatgcagaaactgggagaaggtgaaggatctatgacaaaagaagaa
tttgccaagatgaagcaagaactggaagctgagtatctcgctgtctttaagaagactgtg
tcctcacatgaagtctttcttcagcggctttcttctcaccctgttctcagtaaagaccga
aacttccatgttttcttggaatatgatcaggatctaagtgttaggcggaaaaataccaag
gagatgtttggaggcttttttaaaagtgttgtgaagagcgctgatgaggtccttttttct
ggagttaaggaggtggatgacttctttgagcaagagaagaacttccttattaactattac
aacaggatcaaggactcctgtgctaaagcggacaagatgaccagatctcacaaaaatgtt
gctgatgattacatccacactgcagcctgcttgcatagcctggccttagaagagcccaca
gtcatcaaaaagtacctgttgaaagttgcagagctatttgaaaaacttaggaaagtggaa
ggtcgagtctcatcagatgaagatttaaaactgacagagctcctccgatactacatgctc
aacatagaggctgcaaaggatctcctatacagacgcacaaaggccctaattgactatgag
aattcaaacaaagctttggacaaggcccggttaaaaagcaaagatgtcaagttggcagag
actcatcagcaggaatgctgccagaagtttgaacagctttctgaatctgcaaaagaagag
ctgataaacttcaaacggaagagagtggcagcatttcgaaagaacctaattgaaatgtct
gaactggaaataaagcatgccagaaacaatgtctccctgttgcagagctgcattgattta
ttcaagaacaactga
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