Rattus norvegicus (rat): 296532
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Entry
296532 CDS
T01003
Symbol
Spopl
Name
(RefSeq) speckle-type POZ protein-like
KO
K10523
speckle-type POZ protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
296532 (Spopl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
296532 (Spopl)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
296532 (Spopl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
296532
NCBI-ProteinID:
NP_001127919
RGD:
1305847
Ensembl:
ENSRNOG00000005070
UniProt:
F7FKB4
B2RZC7
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All DBs
Position
3:complement(26478535..26552344)
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AA seq
392 aa
AA seq
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MSREPTPPLPGDMSTSPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDEESRDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNVSGHTNTNTLK
VPECRLAEDLGNLWENTRFTDCCFFVRGKEFKAHKSVLAARSPVFNAMFEHEMEECTKNR
VEINDLDPEVFKEMMRFVYTGKAPNLDKMADNLLAAADKYALERLKVMCEEALCSNLSVE
NVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNNNQATDIMETSGWKSMI
QSRPHLVAEAFRALASSQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaacctacccctcctctgcctggagatatgtctactagtcctgttgcggaa
agctggtgctacacacaggttaaagtagtgaaattttcctacatgtggactattaataac
ttcagtttttgtcgagaagaaatgggtgaagtgttaaagagttcaacattttcttctggc
ccaaatgataaaatgaaatggtgcctgagggtaaacccaaaaggcctagatgaggaaagt
agagactacttgtccttgtatttgcttctggtcagctgcccgaagagtgaggttcgagct
aaattcaaattttctcttctgaatgctaaaagggaagaaacaaaagcaatggaaagccaa
agagcatatcgatttgtacaggggaaggattggggatttaaaaaattcattagaagggat
tttttgcttgacgaagctaatggtctccttccagatgacaagcttacgttattctgtgag
gtgagtgtggtccaagattcagtaaatgtatcaggacatactaatacaaacactttgaag
gtgccagaatgtcggctagcagaagacttagggaatctttgggaaaacacaagatttaca
gattgctgcttttttgtgagaggaaaagaattcaaagctcataagtcagtgcttgcagct
cgatccccagtttttaatgcaatgtttgaacatgaaatggaagaatgcacaaagaatcga
gtggaaataaatgatttagaccctgaggtttttaaagaaatgatgagattcgtttacaca
ggaaaggcaccaaatcttgataaaatggctgacaacttgttggcagctgcagataaatat
gcactggaacggctgaaggtcatgtgtgaagaagctttgtgtagtaacctctcagtagaa
aatgttgctgatacccttgtccttgcagatttgcacagtgcagaacagttgaaagcccag
gcaatagactttattaataggtgcagtgttcttcgacaacttgggtgtaaggatgggaaa
aactggaacaacaaccaagcaactgacataatggaaacatcagggtggaagtccatgatt
cagtctcgtcctcatttagtggcagaagccttccgagcacttgcttcttcacagtgtcca
cagtttggtattccacgcaaaaggttaaagcagtcttga
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