Rattus norvegicus (rat): 296634
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Entry
296634 CDS
T01003
Symbol
Nup214
Name
(RefSeq) nuclear pore complex protein Nup214
KO
K14317
nuclear pore complex protein Nup214
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
296634 (Nup214)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
296634 (Nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
296634 (Nup214)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
296634 (Nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup214_FG
WD40
ANAPC4_WD40
dCache_2
Motif
Other DBs
NCBI-GeneID:
296634
NCBI-ProteinID:
NP_001162031
RGD:
1304977
Ensembl:
ENSRNOG00000023393
LinkDB
All DBs
Position
3:35652841..35738323
Genome browser
AA seq
2067 aa
AA seq
DB search
MGDEMDAMIPEREMKDFQFRALKKVRIFDSPEELPKERSSVLTVSNKYGMLFAGGTNGLN
VFPTKSLLIQNKPGDDPNKIVDTIQGLNVPMKFPVHHLALSCDNLTLSACMMSSEYGSII
AFFDVRTFSNQAKPLKRPFTYHKLSNGASGMVNDMKWNPTVPSMAAVCLADGSISVLQVT
DVVKVCATLPPSSGVTCVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYEADHP
VRVLDVLWIGTYVFTIVYAGADGALETCPDVVMALLPKKEEKHPEIFVNFMEPCYSSCTE
RQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQTNWESWVLEDSSRAELPVTDKSDDS
LPVGVAIDYTNEVEVAINEEKTLPPAPVLLLLSTDGVLCPFYMINQNPGVRSLIKTLELI
SAEGERQPKSSGSFPSTPPSPQAPQNLDAPATASSPLPPVSAAPTATFPLPSAGGGPSVF
SFGPSPFKSSSIPGEPPPYPTGSDSSRAAPASGTPTFSFAPPSKGTLAPTPAVAPVPTSA
APFTFGSSGFKPPLESTPMSSAPNTGMKPSFPPSTSSVKVNLNEKFTAVASSAPVHSSTS
IPSVLPFSSSPKPPASGPLSHPTPLPASPSSMPLKPSVSPSPSVGRSAQTAPSSAPSTGQ
KSPRVNPPVPKSGSSQARALQPPVTEKQRHQWKESDPVMAGIGEEIAHFQKELEELKART
SKACFQVGTPEEMKMLRTESDDLHTFLFEIREATESLHGDISTLKTTLLEGFAGVEEARE
QHGRNHDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRHLEQKK
RQRRLIVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYNQTSPWNRPSTLSTQS
DTPSFDSDLEHLLKTTIESHTKPSPRVPGKLSPAKQAQLRNFLAKRKTPPVRSTAPASLS
RSAFLSQRYYEDLDEGSSASSVAHPLEGEDARPTPTCREEEAVVPVPRHAPVVRTPSVQP
SLLPQAMPFAKPHLIHSSSPAAMSSSISTSATKVIPQGADTTMLATKTVKHGAPGPSHTV
AAPQAAAAAALRRQMASQAPAVSTLTESTLKNVPQVVNVQELKSNPSPPSAAMGSSGPHS
AAKAPHAVLTPVAASQAKQGSLINSFKPSGPTPVSCQLSSGDKAVGPGTAKTESPVTSTP
STGQLNKPFSFASPGTFTFGTITPAPSSSFTATPGAAPPTKESNQLEAFSFGGGGKPFCE
TIPGNPPATGPPSAPSTSVTTTSLEDSAPTSSKPATPETPVSTASSKLETPPSKLGELLF
PSSLAGETLGSFSGLRVGQAEESTKPVSKASSTNLAGAQPAKPSGFSFPAASVLGKPVEP
SVTSSAPAAPVSALSASTSSSSATVFGSVPLTSAAPSGLMSFSGASLASSKASFSFGNQQ
TSSAAAAAATPASTSVAPSLPASFPTLSFGGLLSSPSASSLPVSSGKITEEATPPAVPDK
SDHSEVSASTPSLPLQPPSAQLPQASLQTSDPVKKEPVPAQTTDSRPSSSASLVASTEST
PVAPGGPDSKTEAVSPASTFAGPGPAVVAAVLLGAGSAASEASGTPSTSSTVSSSTPTPA
TETAVFGTATSGSSVFTQPPAASSSSAFNQLSSNTATAPSATPVFGQVAASIASTAAATP
QASSSGFGSPAFGASAPGVFGQTAFGQSPAFGQATSSPASGFSFSQPGFSSVPAFGQSVS
STPTSTSANVFGATSSTSSPGSFSFGQASTNTGGTLFGQNNPPAFGQSPGFGQGGSVFGS
TSATTSTAAPSGFSFCQASGFGSSNTGSVFGQAASSGGSVFGQSSTSSGSVFGSGNATRG
GGFFSGLGGKPSQDAANKNPFSSASGGFGSTPTPNTSNLFGNSGAKTFGGFGSSFGEQKP
AGTFSSGGGSVASQGFGFSTPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSP
LGSTGGKVFGEGTAAASAGGFGFGSSSNTASFGTLASQNAPTFGSLSQQTSGFGTPSSGF
SGFGSGTGAFTFGSSNSSVQGFGGWRS
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgagatggatgccatgatccctgagcgggagatgaaggactttcagtttaga
gctctgaagaaagtgagaatctttgactctcctgaggagttgcccaaggagcgctcgagt
gtgctcaccgtatccaataagtatggcatgctctttgctggtggcaccaatggcttgaat
gtctttcctactaaaagccttcttatccaaaacaaacctggagatgatcccaataaaatt
gttgacacaatccaaggcttgaatgtccctatgaaattcccagttcatcacctggcactg
agctgtgataaccttacactctctgcgtgcatgatgtccagtgaatatggctccattata
gccttttttgatgttcgcacattttcaaatcaggctaaaccactgaaacgcccatttacc
tatcacaagctttcaaacggtgccagcgggatggtgaatgatatgaagtggaaccccact
gtcccttccatggcagcagtttgtctggctgatggcagcatttctgtcttgcaagttacg
gatgtggtgaaagtgtgcgccacacttcctccttcatcgggagtcacgtgtgtatgctgg
agccccaaaggaaagcagctggccgtgggaaagcagaatggaactgtggtccagtatctt
cctacattgcaggaaaaaaaggtcattccatgtcctccgttttatgaggcagaccaccct
gtcagagttctggatgtgctgtggattggtacatacgtcttcacgatagtctatgctggt
gcggatggcgcactggagacctgtccagatgtggtgatggctctgcttccgaaaaaagaa
gaaaagcacccagaaatatttgtgaacttcatggagccctgctacagcagctgcacagag
agacaacatcattactacctcagctacatcgaggagtgggatttagtgctggcagcatct
gcagcgtcaacagaagttagcatccttgctcgacaaagtgatcagactaattgggaatct
tgggtactggaagactctagtcgagctgaactgcctgtgacagacaagagcgatgactcc
ttgcccgtgggtgttgccatagattacaccaatgaagtagaagttgccatcaatgaagaa
aagactcttcctcctgctccggttctcctgttactttcaacagatggtgtactttgtcca
ttttatatgatcaatcaaaatcccggggttaggtccctaatcaagaccttagagctgatc
tcagcagagggagagcgccagcctaagtcctcaggaagttttcctagtacaccaccttcc
cctcaagctccacagaaccttgacgctccagcaacagcctcttcgcctcttccaccggtg
tctgctgctcccaccgccaccttccctttgccgtctgctggaggaggcccttctgtgttc
tcctttggcccttcacccttcaagtcctcctccatccccggggagcccccgccatacccc
actggctctgacagttccagagcagcaccagcctctggcacccccaccttctcttttgcg
cctccttccaaaggcaccttggccccgacccctgcagtggctcctgtgcccacatctgct
gctcccttcactttcggatcatcaggttttaagccccccttggaaagcacacctatgtcc
agtgccccaaacacagggatgaagccttcattcccaccctcaacttcttcggtgaaagtc
aacctgaacgagaagttcaccgctgtggcctcctctgcacccgttcatagctccacaagc
ataccctccgtgttgccgttctcttcctcccccaagccaccagcttctggaccactcagc
catcccacgcctctcccagcatcacccagctccatgcctttgaaaccttcagtctctccc
tctccgtcagttggccgctccgcccagactgccccgagttcagcaccctccacagggcag
aaatctcctagggtaaatcctccagtgccaaagtcagggtcctctcaggccagagcactt
cagcctcctgttacagagaagcagaggcatcagtggaaagagtcagaccctgtgatggct
ggaattggagaggagattgcacacttccagaaagagctggaggagttaaaggcgcgaacc
tccaaagcctgtttccaggtcggcacccctgaggagatgaagatgctgcgcacagagtca
gacgacctgcacaccttcctctttgagatcagagaggccacagagtctcttcatggagac
ataagtacactgaaaacaactctgctggagggctttgctggtgttgaagaagccagagaa
cagcatggaagaaatcatgactctgggtatctccatctgctttataaaagaccactggat
cccaagagcgaggcccagctccaggaaattcgccgccttcaccagtatgtgaaatttgct
gtccaggatgtgaatgatgtcctagacttagagtgggatcggcatctggagcagaagaaa
agacagaggcgcctaattgtgccagagagagagacacttttcaacacactagccaacaac
cgggaaatcatcaaccagcagaggaagaggttgaatcacctggtggacagtctgcagcag
ctccgtctctataaccagacgtccccatggaaccggccctcaacgctttcaacgcaaagt
gacactcctagttttgacagtgaccttgaacacctgctaaagactaccattgaatctcac
accaagccttctcctagagtgccaggtaaactgtcccctgcgaaacaggcccaactgagg
aacttcttggccaaaaggaagaccccaccagtgaggtctactgctccagccagcctgtct
cggtcagccttcctgtctcagaggtactatgaagacttagatgaaggcagctccgcgtcg
tccgtagctcaccctctggagggagaagatgcccggccgacgccgacctgcagagaggag
gaggctgtggtcccagtccctcggcatgcccccgtggtccgcacaccttctgtccaaccc
agtctcctgcctcaggcgatgccttttgcaaagcctcacctgattcatagttcttcacct
gctgcgatgagctcttcaatctctacgtcagctaccaaagttattcctcaaggagccgac
accacaatgctggcaactaaaacggtaaagcatggtgcaccaggtccttcccacactgtc
gcagctccccaggcagcggctgctgcagccctgagacggcagatggccagtcaggcgcca
gctgtgagcactctgaccgaatccactttgaagaatgtccctcaagtggtgaatgtacag
gaactgaagagtaacccctcacccccttctgcggccatgggttcttctgggccgcactca
gcagccaaagccccccatgcagtgttaaccccagtggctgccagccaagccaagcagggg
tctctgataaattccttcaagccgtcaggacccacaccagtgtcctgtcagctgtcctct
ggggataaagctgtaggtccagggacggccaagacagagtcacctgtgacctccacccca
tctacggggcagctcaacaagcctttctcattcgcctccccagggacctttacttttggg
acaatcacaccagccccatcttctagtttcactgccacaccaggggcagcaccccccact
aaagagtcaaaccagcttgaggcgttctcatttggcgggggaggcaaacctttttgtgag
accattcctggaaacccccctgccacgggacccccatcagcacccagcacttctgtaaca
actacgtctctggaagactctgctccaaccagcagcaaacctgcaactcctgaaactcct
gtgtccactgcctctagcaaattggaaactccaccatccaagttaggagagcttctcttc
ccaagttctctagctggagagacgctagggagcttctcaggactgcgtgttggccaggct
gaggagtctacaaagcccgttagtaaggcctcctccacaaacctggccggagcccagcca
gccaagccctcagggtttagctttcctgctgcttccgtgttagggaagccagtggagccc
agtgtgacgtcctctgccccagcggcaccagtctcagctctgagtgcgagcactagcagt
tcctcggcaactgtctttggcagtgtgccccttaccagtgctgcaccttccgggctcatg
agttttagtggggcctctttggctagtagcaaagctagtttctcatttggaaaccaacag
actagtagtgcagcagcagcagcagctaccccagcatccacctcagttgccccttccctt
ccagcatctttccctactttgtcatttggtggcctcctgagttcaccatcagcttcttcc
ctgcctgtgtcttctggtaagatcacagaggaggccacaccaccagctgtgcctgacaag
tcagaccacagtgaagtgtcagcatcaacaccctcacttccactacagccaccgtcagcc
cagcttccccaggcatctctgcaaacttctgaccctgtcaaaaaagaacctgttcctgcg
cagaccacagacagcagaccatcatcttctgccagccttgtggcatccacagaatccact
ccagtcgccccagggggccctgatagcaagacagaagcagtgtcccctgcttccaccttt
gcagggcctgggccggccgtggttgcagctgttctcctaggagcaggctcggcagccagt
gaagcttccggtacccctagtacctccagcactgtctccagcagtaccccaactcctgcc
acagagacagctgtatttgggactgccacttctggctcctcagtctttacacagccgcct
gctgccagttcgagctcagcattcaaccagctctccagtaacacggccactgcaccctcc
gccacccccgtgtttgggcaagtggcagccagcatagccagcacagccgctgccacgcca
caggccagcagttcaggatttggcagccctgcgtttggtgcttcggctcctggagtgttc
ggacagacagcatttgggcagtccccagcctttgggcaagcaacaagcagccctgcgagt
ggcttctccttcagccaacctgggttcagctctgtccctgcttttggccagtctgtctcc
tccacccccacatccaccagtgccaatgtcttcggagccacctcaagtaccagcagccct
ggttccttctcatttggacaggcttctaccaatacaggagggacgctatttggccaaaac
aaccctcctgcttttggtcagagcccgggctttgggcagggaggctctgtgtttggtagc
acctcggccactacctctacagcagcaccttcagggtttagcttttgtcaagcctccggt
tttgggtctagtaatactggttctgtgtttggtcaggcagccagtagcggtgggtcagtc
tttggccagtcatccacttccagtggcagcgtgtttgggtctggaaatgctacaagaggg
ggcggtttcttcagtggccttggaggaaaacccagccaggatgctgccaacaaaaaccca
ttcagctcggccagtgggggctttgggtctacgcctacacccaatacctctaacctgttc
gggaacagcggagctaagaccttcggagggttcggctcctccttcggggagcagaagcct
gctggcacattcagctctggtggtgggagcgtggcatcccaaggttttggattttccact
ccaaataaaacaggtggcttcggtgctgctccagtgtttggcagccctcctacttttggg
ggatcccctgggtttggaggggtgccagcattcggttcagccccagcctttacaagccct
ctgggctcgacgggaggcaaagtgttcggagagggtactgcggccgccagcgcaggagga
ttcgggttcgggagtagcagcaacactgcatccttcggtaccctcgccagtcagaacgca
cccactttcggatccttgtcccagcagacctctggcttcgggaccccgagcagtggattc
tctgggtttggatcaggcacaggagcattcaccttcggatcatctaactcgtctgtccag
ggcttcggtggctggagaagctga
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integrated database retrieval system
