Rattus norvegicus (rat): 296732
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Entry
296732 CDS
T01003
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
rno04714
Thermogenesis
rno05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
296732 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
296732 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
296732 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
296732 (Smarcd3)
03036 Chromosome and associated proteins [BR:
rno03036
]
296732 (Smarcd3)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
296732 (Smarcd3)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
296732 (Smarcd3)
PBAF complex
296732 (Smarcd3)
GBAF(ncBAF) complex
296732 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
296732
NCBI-ProteinID:
NP_001011966
RGD:
1311869
Ensembl:
ENSRNOG00000010077
UniProt:
F7FMF4
Q5U3Y2
LinkDB
All DBs
Position
4:11441142..11472781
Genome browser
AA seq
470 aa
AA seq
DB search
MSPGVQHPPTVVQRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAA
PPPGQSQAQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLD
QTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDD
PSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLL
LMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQ
IFDCPRLKFSEIPQRLTGLLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMS
SFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKV
MTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVRNT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaggtgttcagcacccacccaccgtggtacagcgccccgggatgccgtctgga
gcccgaatgccccaccagggggcgcccatgggccccccgggctccccgtacatgggcagc
cccgcggtacgacccggcctggcccccgcgggcatggagcccgcccgcaagcgagcagcg
cccccgcccgggcagagccaggcacaaggccagggccagccggtgcccaccgccccagcg
cggagccgcagtgccaagaggaggaagatggctgacaaaatcctccctcaaaggattcgg
gagctggtccctgagtcccaggcttacatggacctcctagcatttgagaggaaactggat
caaaccattatgcggaagcgggtggacatccaggaggccctgaagaggcccatgaagcaa
aagcgaaagctgcgcctttatatctccaatacttttaaccccgcgaagcccgatgccgaa
gattctgatggcagcattgcctcctgggagctgcgggtggaggggaagctcttggatgat
cccagtaagcagaagaggaagttttcttccttcttcaagagtttggtcattgagttggac
aaagacctttatggcccagacaaccaccttgttgagtggcaccggacacccacaacccag
gagacagatgggttccaagtgaagagaccaggggacttgagtgtgcgctgtaccctgctc
ctgatgctggactatcagcctccccagttcaaactggacccccgcttggcccggctgctg
gggttgcatacgcagagccgctcagccattgtccaggcactgtggcagtacgtgaagacc
aacaggctacaggactcccatgacaaggaatacatcaatggagacaagtatttccagcag
atttttgactgtccccgcctgaagttttctgagattccccagcgtctcacaggcctgctg
cttcctcctgaccccattgtgatcaaccatgtcatcagcgtggacccatcagaccagaag
aagaccgcgtgctatgacattgatgtggaggtggaggaaccactgaaggggcagatgagc
agctttctcctgtccaccgccaaccagcaggagatcagtgctctggacagtaagatccat
gagaccattgagtccataaatcagctcaagatccagagggacttcatgctaagtttctcc
agagaccccaaaggctacgtccaagacctgctccgctcccagagccgtgatctcaaggtg
atgacagatgtggccggtaaccccgaggaagagcgccgggctgagttctaccaccagccc
tggtcccaggaagctgtcagccgctacttctactgtaagatccagcagcgcaggcaggag
ctggagcagtcactagttgtgcgcaacacctag
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