Rattus norvegicus (rat): 29678
Help
Entry
29678 CDS
T01003
Symbol
Sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
29678 (Sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
29678 (Sart1)
04121 Ubiquitin system [BR:
rno04121
]
29678 (Sart1)
Spliceosome [BR:
rno03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
29678 (Sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
29678 (Sart1)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
29678 (Sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
29678
NCBI-ProteinID:
NP_113784
RGD:
61930
Ensembl:
ENSRNOG00000020475
UniProt:
Q5XIW8
LinkDB
All DBs
Position
1:complement(212119824..212128517)
Genome browser
AA seq
806 aa
AA seq
DB search
MGSSKKHRGEKEAAGTTAAAGTGGTTEQPPRHREHKKHKHRSSGGGSSGGERRKRSRERG
AERGSGRRGAEAEARSGAHGRERSQAEPSERRVKREKRDEGYEAAASSKASSGDASSLSI
EETNKLRAKLGLKPLEVNAVKKEAGTKEEPVAADVINPMALRQREELREKLAAAKEKRLL
NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEE
FEQRRQDLYSARDLQGLTVEHAIDSFREGETVVLTLKDKGVLQEGEDVLVNVNMVDKERA
DKNVELRKKKPDYLPYVEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGMADGL
RERELEEIRTKLRLQAQSLNTVGPRLASEYLSPEEMVTFKKTKRRVKKIRKKEKEVIMRA
DDLLPLGEDQTQDGDFGSRLRGRGRRRVPEVEEEALEDEEKDPVAQPPPSDDTRVENMDI
SDEEDGGALPSGPPELEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVLEIVKKLES
RQRGWEEEEDPERKGTIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANG
GSESDGEENIGWSTVNLDEEKQHQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETT
VQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVD
ETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQE
KQKAQKTPYIVLSGSGKSMNANTITK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcaaagaagcaccgtggagagaaggaggcagccgggactacggctgcggcc
ggtaccgggggcactaccgagcagccgccacggcatcgagagcacaagaaacacaagcat
cggagcagcggcggcggcagcagcggcggcgaacgacggaagcggagccgcgagcgtggg
gccgagcgcgggagcgggaggcgcggggccgaagccgaggcccgcagcggcgcgcatggt
cgtgaacgaagccaagcggaaccctcggagcggcgcgtgaagcgggagaaacgcgatgaa
ggctatgaggccgctgccagctccaaagccagctctggagatgcctcatcactcagcatc
gaggagaccaataaactccgagcaaagttggggttgaagcccttggaagtcaatgctgtt
aagaaagaggcgggcaccaaggaggagcccgtggcagccgatgttatcaaccccatggcc
ttgcgacagcgtgaagaactacgggagaagctggcagctgccaaggaaaagcgcttgctg
aaccaaaaattggggaaaataaagacactgggggaggatgacccctggcttgatgacact
gcagcctggatagagaggagccggcagctacagaaagagaaggacttggcggagaagcgg
gccaagctgctagaagagatggaccaagagtttggtgtgagcactttagtggaggaggag
tttgagcagaggcgacaggacctgtacagcgcccgggacttgcaaggcctcaccgtggaa
catgcaatcgattcctttcgagaaggggagactgtggtcctcactctcaaggacaaaggg
gttctgcaggagggggaggatgtgctggtgaatgtgaacatggtggacaaggagcgagca
gacaagaacgtggaacttcggaagaagaagcctgactacctgccctatgtggaggacgag
agtgtggatgacttggcacagcaaaaacctcgctctatcctggccaaatatgatgaggaa
ctggagggcgagcggccacattccttccgtttagagcagggtggcatggccgatggcctg
agagaacgagagctcgaagaaatccggaccaagctacggctgcaggctcagtctctgaac
actgtagggccccggcttgcctctgagtacctcagtccggaggagatggtgactttcaaa
aagaccaaacggagagtgaagaaaatccgaaagaaggagaaggaggtaataatgcgggca
gatgacttgctgccccttggcgaagaccagactcaggacggggactttggatccaggctt
cggggccggggtcggcgccgagttcctgaagtggaggaggaggcccttgaggatgaagag
aaggaccctgtggcccagccgccaccatcagatgacactcgcgtagagaacatggacatc
agtgatgaggaggatgggggggctcttccctcggggcccccagagctggaggaggacgaa
gcggagctggagctgcagaagcagctggagaaggggcgccggctgcggcagctgcagcaa
ctgcagcagctgcgggacagcggtgagaaggtgctggagattgtgaagaaactggagtct
cgccaacgtggctgggaagaggaagaggatcctgagcggaaggggaccatcgtgttcaat
gccacttctgagttctgtcgcactctgggggaaatccccacttacggattagctggcaac
cgagaggagcaggaggagctcatggactttgaaagggatgaagagcgctcggccaatggt
ggctctgaatcagatggcgaagagaacattggctggagcaccgtcaacctggatgaggag
aagcaacatcaggatttctccgcttcctctaccaccatcctggatgaagagcccattgtg
aacagagggctggcggctgccctgctcctgtgtcagaacaaaggactgttggagaccacg
gtacaaaaggtggcccgagtaaaggctcccaataagtcactgccttcagcagtgtactgc
atcgaggataagatggccattgatgacaagtacagccgacgtgaggagtacaggggcttc
acccaggacttcaaggagaaggatggctacaagcccgatgttaagattgaatatgtggat
gagacgggcaggaaactgactcccaaggaggcattccggcagctgtcccaccgcttccat
gggaagggctcagggaagatgaagactgagcggcggatgaagaagctggatgaggaggcg
ctcctaaagaaaatgagttccagtgacacgcccctgggaaccgtggcactgctccaggag
aagcagaaggctcaaaagacaccgtacatcgtgctcagtggcagtggcaagagcatgaat
gcgaacaccatcaccaaatga
DBGET
integrated database retrieval system
