KEGG   Rattus norvegicus (rat): 296787
Entry
296787            CDS       T01003                                 
Symbol
Sema3c
Name
(RefSeq) semaphorin-3C precursor
  KO
K06840  semaphorin 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    296787 (Sema3c)
SSDB
Motif
Pfam: Sema Ig_3 I-set PSI Ig_6 ig V-set Ig_2 NUP210_Ig
Other DBs
NCBI-GeneID: 296787
NCBI-ProteinID: NP_001100048
RGD: 1309343
Ensembl: ENSRNOG00000006526
UniProt: B5DFL7
LinkDB
Position
4:complement(18538452..18702453)
AA seq 751 aa
MALREICVLVGVFICSICVQGSSQPQARVYLTFDELRETKTSEYFSLSHQQLDYRILLMD
EDQDRIYVGSKDHILSLNINNISQEPLSVFWPASTIKVEECKMAGKDPTHGCGNFVRVIQ
TFNRTHLYVCGSGAFSPVCTYLNRGRRSEDQVFMIDSKCESGKGRCSFNPNVNTVSVMIN
EELFSGMYIDFMGTDAAIFRSLTKRNAVRTDQHNSKWLSEPMFVDAHVIPDGTDPNDAKV
YFFFKERLTDNNRSTKQIHSMVARICPNDTGGQRSLVNKWTTFLKARLVCSVTDEDGPET
HFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKEGPN
HQLISYQGRIPYPRPGTCPGGAFTPNMRTTKDFPDDVVTFIRNHPLMYNSIYPIHRRPLI
VRIGTDYKYTKIAVDRVNAADGRYHVLFLGTDRGTVQKVVVLPTNSSASGELILEELEVF
KNHVPITTMKISSKKQQLYVSSNEGVSQVSLHRCHIYGTACADCCLARDPYCAWDGHSCS
RFYPTGKRRSRRQDVRHGNPLTQCRGFNLKAYRNAAEIVQYGVRNNSTFLECAPKSPQAS
IKWLLQKDKDRRKEVKLNERIIATSQGLLIRSVQDSDQGLYHCIATENSFKQTIAKINFK
VLDSEMVAVVTDKWSPWTWAGSVRALPFHPKDILGAFSHSEMQLINQYCKDTRQQQQLGE
EPQKMRGDYGKLKALINSRKSRNRRNQLPES
NT seq 2256 nt   +upstreamnt  +downstreamnt
atggcattacgggagatttgtgtgttggttggagtatttatttgttccatttgcgtccaa
ggatcatcccagccccaagcaagagtgtatttaacattcgatgagcttcgagaaaccaaa
acctctgaatactttagtctgtcccaccagcagttagactacagaatattactgatggat
gaagatcaagaccggatatacgtggggagcaaagaccacatcctgtccttgaatatcaac
aatatcagtcaagaacctttgagtgttttctggccagcatcaacaatcaaagttgaagag
tgcaaaatggctggcaaagatcctacacacggctgtgggaatttcgtccgcgttattcag
accttcaaccgtactcacttgtatgtctgtgggagtggagcgttcagcccagtgtgcacc
tacctgaacaggggaaggaggtcagaggaccaagttttcatgatcgactctaaatgtgaa
tcaggaaaaggacgatgctctttcaaccccaatgtgaacaccgtgtctgttatgatcaat
gaggaactcttctcaggaatgtatatagatttcatgggtacagatgctgctatttttcga
agtttaactaagaggaatgcagtccggactgatcaacacaattcaaaatggctgagtgaa
cctatgtttgttgacgcacatgtgatcccagatggcactgatccgaatgatgctaaggtc
tatttcttcttcaaagaaagattgactgacaacaacaggagcacaaaacagatacattcc
atggtcgcaagaatatgccctaatgacactggtggacaacgtagtcttgtcaacaagtgg
accacattcttaaaggcaaggcttgtgtgctcagtcacagatgaagatggcccagagaca
cattttgatgaactagaggatgttttcctgctggaaacggacaacccaagaacaacactt
gtgtatggcatcttcacaacatcaagctctgtttttaaaggatcagctgtgtgtgtgtat
catttatctgatatacagactgtattcaatgggccttttgcccacaaggaagggcccaat
caccaactgatatcctatcaaggtagaattccatatcctcgtcctggaacttgcccagga
ggggcttttacacccaatatgagaaccaccaaggacttcccagatgatgttgtcactttc
attcggaaccaccctctcatgtacaattccatctaccccatccacagaaggcctctgatc
gtccgcataggcactgactacaagtacacaaagattgctgtggaccgtgtgaatgctgct
gatgggcgataccacgttctgttcctcgggacagatcggggcaccgtgcagaaggtcgta
gtccttcctaccaacagctctgctagtggggagctcattctggaggagctggaagtcttt
aagaatcatgttcctataacaacaatgaaaatctcatccaaaaagcaacagttgtacgtg
agctccaatgagggggtttcccaagtctctctgcatcgttgccatatctacggcacagcc
tgtgcagactgctgcctggcaagggacccatactgcgcctgggatggccactcctgctct
aggttctaccccactgggaaacgaaggagccgaagacaagacgtgagacacgggaatcca
ttgacacagtgccgagggttcaatctgaaagcatacagaaatgcggctgaaattgttcag
tacggagtaagaaataacagcactttccttgaatgtgctcccaagtctccgcaggcatct
atcaagtggttgctgcagaaagacaaagacaggaggaaggaggttaaactgaatgaacgc
attatagccacttcccaaggactactgatccgctctgttcaagattctgaccaaggactc
taccactgcattgccacagagaacagcttcaaacagaccatagccaagattaacttcaaa
gttttagattcagaaatggtggccgttgtgacagacaagtggtccccatggacatgggct
ggatctgtgagggctctacccttccatccaaaggacatcctgggggcattcagccactcg
gaaatgcagctcatcaaccagtactgcaaagacacccggcagcaacagcagctgggggag
gagccacagaagatgagaggggactatggcaaactaaaggcgctcatcaacagcaggaaa
agcagaaacaggaggaatcagcttccagagtcataa

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