Rattus norvegicus (rat): 29715
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Entry
29715 CDS
T01003
Symbol
Slc8a1
Name
(RefSeq) sodium/calcium exchanger 1 isoform 6 precursor
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04020
Calcium signaling pathway
rno04022
cGMP-PKG signaling pathway
rno04260
Cardiac muscle contraction
rno04261
Adrenergic signaling in cardiomyocytes
rno04371
Apelin signaling pathway
rno04740
Olfactory transduction
rno04961
Endocrine and other factor-regulated calcium reabsorption
rno04974
Protein digestion and absorption
rno04978
Mineral absorption
rno05410
Hypertrophic cardiomyopathy
rno05412
Arrhythmogenic right ventricular cardiomyopathy
rno05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
29715 (Slc8a1)
04020 Calcium signaling pathway
29715 (Slc8a1)
04022 cGMP-PKG signaling pathway
29715 (Slc8a1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
29715 (Slc8a1)
04261 Adrenergic signaling in cardiomyocytes
29715 (Slc8a1)
09154 Digestive system
04974 Protein digestion and absorption
29715 (Slc8a1)
04978 Mineral absorption
29715 (Slc8a1)
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
29715 (Slc8a1)
09157 Sensory system
04740 Olfactory transduction
29715 (Slc8a1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
29715 (Slc8a1)
05412 Arrhythmogenic right ventricular cardiomyopathy
29715 (Slc8a1)
05414 Dilated cardiomyopathy
29715 (Slc8a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
29715 (Slc8a1)
00536 Glycosaminoglycan binding proteins [BR:
rno00536
]
29715 (Slc8a1)
Transporters [BR:
rno02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
29715 (Slc8a1)
Glycosaminoglycan binding proteins [BR:
rno00536
]
Heparan sulfate / Heparin
Others
29715 (Slc8a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
29715
NCBI-ProteinID:
NP_001257705
RGD:
3717
Ensembl:
ENSRNOG00000008479
UniProt:
Q01728
LinkDB
All DBs
Position
6:18975498..19299704
Genome browser
AA seq
969 aa
AA seq
DB search
MLRLSLPPNVSMGFRLVTLVALLFTHVDHITADTEAETGGNETTECTGSYYCKKGVILPI
WEPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEKEITIKKPNGETT
KTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFTAGDLGPSTIVGSAAFNMFIII
ALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVSSPGVVEVWEGLLTFFFFP
ICVVFAWVADRRLLFYKYVYKRYRAGKQRGMIIEHEGDRPASKTEIEMDGKVVNSHVDNF
LDGALVLEVDERDQDDEEARREMARILKELKQKHPDKEIEQLIELANYQVLSQQQKSRAF
YRIQATRLMTGAGNILKRHAADQARKAVSMHEVNMDVVENDPVSKVFFEQGTYQCLENCG
TVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVIFKPGETQKEIRVGIIDDD
IFEEDENFLVHLSNVRVSSEVSEDGILDSNHVSAIACLGSPNTATITIFDDDHAGIFTFE
EPVTHVSESIGIMEVKVLRTSGARGNVIIPYKTIEGTARGGGEDFEDTCGELEFQNDEIV
KIITIRIFDREEYEKECSFSLVLEEPKWIRRGMKALLLNELGGFTLTGKKMYGQPVFRKV
HARDHPIPSTVISISEEYDDKQPLTSKEEEERRIAEMGRPILGEHTKLEVIIEESYEFKS
TVDKLIKKTNLALVVGTNSWREQFIEAITVSAGEDDDDDECGEEKLPSCFDYVMHFLTVF
WKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALG
TSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAANGEQFKVSP
GTLAFSVTLFTIFAFINVGVLLYRRRPEIGGELGGPRTAKLLTSSLFVLLWLLYIFFSSL
EAYCHIKGF
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgactaagtctcccacccaatgtttcaatgggatttcgtctggtaactctggtg
gctctcttgtttacccatgttgaccatataactgcagatacagaggcagaaacaggagga
aatgaaaccactgaatgtactggctcatattactgtaagaaaggggtgattctgcccatt
tgggaaccccaagacccatcttttggggataaaattgctagagcaactgtgtattttgtg
gccatggtctacatgttcctcggagtttctattattgccgaccggtttatgtcctctata
gaagtcatcacctctcaagaaaaggagattaccataaagaaaccaaatggagagaccacc
aagactacagtgcgtatctggaatgagactgtgtccaacctgaccttgatggccctggga
tcttccgctcctgagattctcctgtctgtcattgaagtgtgtggccataacttcaccgca
ggggaccttggtcccagcaccattgtgggaagcgccgccttcaacatgttcatcatcatc
gcgctttgtgtttatgtggtcccagatggagagacgaggaagattaaacatctgcgtgtg
ttctttgtgacagcagcctggagcatctttgcctatacctggctttacataattttgtct
gtcagctctcctggtgtcgtggaggtctgggaaggattactcactttcttcttctttccc
atctgtgttgtgttcgcttgggttgcagacaggcggcttctcttttacaagtatgtctac
aagcggtacagggctggcaagcagagggggatgatcattgaacatgaaggagacagacca
gcttccaaaactgaaattgaaatggatgggaaagtagtcaactcccacgttgacaatttc
ttagatggcgctctggttttggaagtcgatgagagggaccaagatgacgaggaagccagg
cgtgagatggcaaggattctgaaggaacttaagcagaagcatcccgacaaagagatcgaa
caattaatagaattagccaactatcaagtcctaagtcagcagcaaaagagccgagcattt
taccgaattcaagctactcgcctgatgactggagctggtaacattttgaagaggcatgca
gctgaccaagcgaggaaggctgtcagcatgcatgaagtcaacatggatgtggttgaaaat
gacccagtcagtaaggtcttctttgagcaagggacataccagtgtctagaaaactgtggt
actgtggccctcaccattattcgaagagggggtgacttgaccaacactgtgtttgttgac
ttcaggacggaagatggcacagccaatgctgggtctgattatgagttcacggaagggact
gtgatcttcaaacctggggagacccagaaggaaatcagagttggcatcattgatgatgat
atctttgaagaagatgaaaactttcttgtgcatcttagcaacgtcagggtctcttcagaa
gtctcggaagatggcatactagactccaatcacgtgtctgcgattgcttgtctcgggtca
cccaacactgccaccataaccatttttgatgatgaccacgcgggcatctttactttcgag
gaacccgtgactcacgtgagcgagagcattggcatcatggaggtgaaggtgctgagaacc
tctggagcgcgaggaaatgttatcattccctataaaaccattgaaggcacagcccgaggt
ggaggggaggactttgaggacacctgtggagagctggaattccagaatgatgaaatagtg
aagatcattaccattagaatatttgaccgtgaggaatatgagaaagagtgcagtttctcc
cttgtgcttgaggaaccaaaatggataagaagaggaatgaaagccctgttgttaaatgag
cttggtggcttcacattaacaggaaaaaagatgtatggccaacctgtcttcaggaaggtc
catgctagagatcatccgattccctctaccgtaatcagcatttcagaggagtacgatgac
aagcagccactgaccagcaaagaggaggaggagaggcgcattgcagaaatggggcgcccc
attctaggcgaacacaccaagctggaagtgatcattgaagagtcttacgaattcaagagc
actgtggacaaactcattaagaagacgaacctggccctcgtggtggggaccaacagctgg
agagagcagttcattgaagcgatcaccgtcagcgctggggaagatgacgatgatgatgaa
tgtggggaggagaagctgccctcctgttttgattacgtgatgcactttctcacagtgttc
tggaaggttctgtttgccttcgtcccacctacagaatattggaatggctgggcctgcttc
attgtctccatcctcatgatcggcctactgacagccttcattggagatctggcttcccac
tttggctgcaccattggtctgaaagattccgtgactgcagttgtgtttgtcgctcttgga
acctcagtgccagacacatttgccagcaaagtagcagctacccaggaccagtatgcagat
gcgtccataggcaatgtcaccggaagcaacgctgtgaatgtcttcctgggaatcggcgtg
gcctggtccattgctgccatctaccatgcggccaacggggaacagttcaaagtgtcccct
ggcacgctagctttctctgtcactctcttcaccatttttgctttcatcaacgtgggggtg
ctgctgtatcggcggaggccagaaataggaggtgagctgggtgggccccggactgccaag
ctcctcacatcttccctgtttgtgctcctgtggctcttgtacattttcttctcctccctg
gaggcctactgccacataaaaggcttctaa
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