Rattus norvegicus (rat): 29716
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Entry
29716 CDS
T01003
Symbol
Cacna1d
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04010
MAPK signaling pathway
rno04020
Calcium signaling pathway
rno04022
cGMP-PKG signaling pathway
rno04024
cAMP signaling pathway
rno04218
Cellular senescence
rno04260
Cardiac muscle contraction
rno04261
Adrenergic signaling in cardiomyocytes
rno04270
Vascular smooth muscle contraction
rno04530
Tight junction
rno04713
Circadian entrainment
rno04723
Retrograde endocannabinoid signaling
rno04724
Glutamatergic synapse
rno04725
Cholinergic synapse
rno04726
Serotonergic synapse
rno04727
GABAergic synapse
rno04728
Dopaminergic synapse
rno04911
Insulin secretion
rno04912
GnRH signaling pathway
rno04921
Oxytocin signaling pathway
rno04924
Renin secretion
rno04925
Aldosterone synthesis and secretion
rno04927
Cortisol synthesis and secretion
rno04929
GnRH secretion
rno04930
Type II diabetes mellitus
rno04934
Cushing syndrome
rno04935
Growth hormone synthesis, secretion and action
rno04973
Carbohydrate digestion and absorption
rno05010
Alzheimer disease
rno05020
Prion disease
rno05022
Pathways of neurodegeneration - multiple diseases
rno05031
Amphetamine addiction
rno05207
Chemical carcinogenesis - receptor activation
rno05410
Hypertrophic cardiomyopathy
rno05412
Arrhythmogenic right ventricular cardiomyopathy
rno05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
29716 (Cacna1d)
04020 Calcium signaling pathway
29716 (Cacna1d)
04024 cAMP signaling pathway
29716 (Cacna1d)
04022 cGMP-PKG signaling pathway
29716 (Cacna1d)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
29716 (Cacna1d)
09144 Cellular community - eukaryotes
04530 Tight junction
29716 (Cacna1d)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
29716 (Cacna1d)
04929 GnRH secretion
29716 (Cacna1d)
04912 GnRH signaling pathway
29716 (Cacna1d)
04921 Oxytocin signaling pathway
29716 (Cacna1d)
04935 Growth hormone synthesis, secretion and action
29716 (Cacna1d)
04924 Renin secretion
29716 (Cacna1d)
04925 Aldosterone synthesis and secretion
29716 (Cacna1d)
04927 Cortisol synthesis and secretion
29716 (Cacna1d)
09153 Circulatory system
04260 Cardiac muscle contraction
29716 (Cacna1d)
04261 Adrenergic signaling in cardiomyocytes
29716 (Cacna1d)
04270 Vascular smooth muscle contraction
29716 (Cacna1d)
09154 Digestive system
04973 Carbohydrate digestion and absorption
29716 (Cacna1d)
09156 Nervous system
04724 Glutamatergic synapse
29716 (Cacna1d)
04727 GABAergic synapse
29716 (Cacna1d)
04725 Cholinergic synapse
29716 (Cacna1d)
04728 Dopaminergic synapse
29716 (Cacna1d)
04726 Serotonergic synapse
29716 (Cacna1d)
04723 Retrograde endocannabinoid signaling
29716 (Cacna1d)
09159 Environmental adaptation
04713 Circadian entrainment
29716 (Cacna1d)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
29716 (Cacna1d)
09164 Neurodegenerative disease
05010 Alzheimer disease
29716 (Cacna1d)
05020 Prion disease
29716 (Cacna1d)
05022 Pathways of neurodegeneration - multiple diseases
29716 (Cacna1d)
09165 Substance dependence
05031 Amphetamine addiction
29716 (Cacna1d)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
29716 (Cacna1d)
05412 Arrhythmogenic right ventricular cardiomyopathy
29716 (Cacna1d)
05414 Dilated cardiomyopathy
29716 (Cacna1d)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
29716 (Cacna1d)
04934 Cushing syndrome
29716 (Cacna1d)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
29716 (Cacna1d)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
29716 (Cacna1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
29716
NCBI-ProteinID:
NP_001376154
RGD:
70973
Ensembl:
ENSRNOG00000013147
LinkDB
All DBs
Position
16:complement(5233682..5527549)
Genome browser
AA seq
2164 aa
AA seq
DB search
MMMMMMMKKMQHQRQQQEDHANEANYARGTRLPISGEGPTSQPNSSKQTVLSWQAAIDAA
RQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACI
SIVDWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKI
IAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALR
AFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKT
CFFADSDIVAEEDPAPCAFSGNGRQCAANGTECRSGWVGPNGGITNFDNFAFAMLTVFQC
ITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS
GEGETQGCCGSLWCWWKRRGAAKTGPSGCRRWGQAISKSKLSRRWRRWNRFNRRRCRAAV
KSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQ
AYFVSLFNRFDCFVVCGGITETILVELELMSPLGVSVFRCVRLLRIFKVTRHWTSLSNLV
ASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQ
ILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAES
LNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSDNKVTIDDYQEEAEDKDPYPP
CDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCH
KLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTT
FGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFI
LYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGP
VYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYAL
KARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDIL
NMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADNSEESNRISI
TFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKV
AMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPDSDYNPGEEYTC
GSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPE
AKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVR
TALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDY
FRKFKKRKEQGLVGKYPAKNTTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEDSKPEEE
DVFKRNGALLGNYVNHVNSDRRESLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSV
CHNHHNHNSIGKQVPTSTNANLNNANMSKAAHGKRPSIGDLEHVSENGHYSYKHDRELQR
RSSIKRTRYYETYIRSESGDEQLPTICREDPEIHGYFRDPRCFGEQEYFSSEECCEDDSS
PTWSRQNYSYYNRYPGSSMDFERPRGYHHPQGFLEDDDSPIGYDSRRSPRRRLLPPTPPS
HRRSSFNFECLRRQNSQDDVLPSPALPHRAALPLHLMQQQIMAVAGLDSSKAQKYSPSHS
TRSWATPPATPPYRDWTPCYTPLIQVDRSESMDQVNGSLPSLHRSSWYTDEPDISYRTFT
PASLTVPSSFRNKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTID
EMESAASTLLNGSVCPRANGDMGPISHRQDYELQDFGPGYSDEEPDPGREEEDLADEMIC
ITTL
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatgatgaaaaaaatgcagcatcaacggcagcagcaagaggaccac
gcgaacgaggcaaactatgcaagaggcaccagactccctatttctggtgaaggaccaact
tctcagccgaacagctccaagcaaaccgtcctgtcttggcaagctgcaattgatgctgct
agacaggccaaggccgcccagaccatgagcacgtctgcacccccacctgtaggatctctc
tcccaaagaaaacgtcagcaatacgccaagagcaaaaaacagggtaactcgtctaacagc
cgacctgcccgtgccctcttctgtttatccctcaataaccccatccgaagagcctgcatt
agtatagtggattggaaaccatttgacatatttatattattggctatttttgccaattgt
gtggccttagctatttacatcccgttccctgaagatgattctaattcaacaaatcataac
ttggaaaaagtagaatatgccttcctgattatttttacagtggagacatttctgaagatt
atagcgtacggactgctgctgcatcctaatgcttacgttaggaacggatggaacttactg
gattttgttatagtaatagtaggattgtttagtgtaattttggaacaattaaccaaagaa
acagaaggcgggaaccactctagtggcaaatcaggaggctttgatgtcaaagccctccgt
gccttccgagtgttaagaccgcttcgacttgtatcaggagtgcccagtttacaagttgtt
ctgaactccattataaaagccatggtccccctcctccacatagcccttttggtgttattc
gtaattatcatctatgcgattatagggttggaactttttattggaaaaatgcacaaaacc
tgtttttttgctgactcagatatagtagctgaagaggacccagctccatgcgcgttctca
gggaatggacgccagtgtgccgccaatggcacggaatgtaggagcggctgggtcggcccc
aatggaggcatcactaattttgacaactttgcctttgccatgctcactgtgttccagtgc
atcaccatggagggctggacagatgtgctctactgggttaatgatgcgataggatgggag
tggccatgggtgtattttgttagtctgatcatccttggctcatttttcgtccttaacctg
gttcttggtgtccttagtggagaattctcaaaggaaagagagaaggctaaagcacgtgga
gatttccagaagcttcgggagaagcagcagctggaagaggatctcaagggctacttggac
tggatcacccaggcagaagacatagatcctgagaatgaagaggagggtggagaggagggc
aaacgaaacactagcatgcccaccagtgagaccgaatctgtgaacacagagaacgtaagt
ggtgaaggcgagacccagggatgctgtggaagtctctggtgctggtggaaaagaagaggc
gcggccaagactgggccctctgggtgtcggcggtggggccaagccatctcaaaatccaag
ctcagccgtcggtggcgtcgctggaaccggttcaatcgcaggagatgcagggcagctgtg
aagtctgtcacgttttactggctggtgatcgttctggtgtttctcaacactctgacgatt
tcctctgagcattacaatcagccagactggctgacgcagattcaagatatagcgaacaaa
gtgctcttggctttgttcacctgtgagatgctggtgaagatgtacagcctgggcctccag
gcctacttcgtctctctcttcaaccgcttcgattgctttgtggtgtgtgggggaatcacc
gaaaccatcctggtggaactggagctcatgtctcccctgggcgtctctgtgttccggtgt
gtacgtctcctgaggatcttcaaagtgaccaggcactggacttccctgagcaacttggtg
gcgtccctgttaaactccatgaagtccatcgcctctctgctgttgctgctcttcctcttc
atcatcatcttctccctgctgggaatgcagctgttcggagggaagttcaatttcgatgag
acacagaccaagcgaagcaccttcgacaacttcccacaggcgctcctgactgtgttccag
atcctgacgggcgaagactggaatgcggtgatgtatgacggcatcatggcctacggaggc
ccgtcctcctctggaatgattgtctgtatttacttcatcatccttttcatctgtggtaac
tatatcctgctgaacgtcttcttggccattgctgtagacaatttggctgatgctgaaagt
ctgaacactgctcagaaagaggaagccgaagaaaaagaaaggaaaaaaattgccagaaaa
gaaagcctagaaaacaaaaaaaacaacaaaccagaggtcaaccagatagccaacagtgac
aacaaggttactattgatgactatcaagaggaggctgaagataaggacccttatccaccc
tgcgatgtgccagtaggtgaagaggaagaggaggaggaagaggacgagcctgaggttcct
gctggtccccgtcctcgaagaatctcagagttgaacatgaaggagaaaattgcacccatc
cccgaaggaagcgcattcttcattcttagcaagaccaacccgatccgtgtgggttgccac
aaactcatcaaccaccacatcttcaccaacctcatcctggtcttcatcatgctgagcagc
gctgccctggccgcagaggatcccatccgcagccactccttccgcaacactatactgggc
tactttgactatgctttcacagccatctttacggttgaaatcctgttaaagatgacaact
tttggagcgttcttgcacaaaggggctttctgtaggaactacttcaatttgctggacatg
ctggtcgttggggtgtctctggtgtcatttgggattcaatccagtgccatctcggttgtg
aagattctgagggtcttaagggtcttgaggcctctcagagcaatcaacagagcaaaagga
cttaagcacgtggtccagtgtgtctttgtggccatccgaaccatcggcaacatcatgatc
gtcacgaccctgctccagttcatgtttgcttgcattggggtccagctgttcaaggggaag
ttctaccgttgcacagatgaggccaaaagtaaccccgaggagtgcagggggcttttcatc
ctttataaggacggcgatgtcgacagtcccgtggtccgtgagaggatctggcaaaacagt
gatttcaatttcgacaatgtcctttcggctatgatggcgctcttcacggtctcgactttt
gagggctggcccgcgttgctgtacaaagctatcgactcaaacggagagaacgttggtcct
gtctacaactaccgtgtggagatctccatcttcttcattatctacatcatcatcgtggcc
ttcttcatgatgaatatcttcgtgggcttcgtcatcgtcaccttccaggagcagggagaa
aaggagtataagaactgtgagctggacaaaaatcagcgtcagtgtgtggaatatgccttg
aaggcccgccccttaaggagatacatccccaaaaacccataccagtacaagttctggtac
gtggtgaactcctcgcctttcgaatatatgatgtttgtcctcatcatgctcaacacgctc
tgcctggccatgcagcactatgagcaatccaagatgttcaatgacgccatggacattctg
aacatggtcttcacgggggtcttcaccgttgagatggttttgaaagtcatcgcatttaag
cccaaggggtattttagtgacgcctggaacacgtttgactccctcatcgtaatcggcagc
attatagacgtggcactcagcgaagctgacaactctgaagagagcaatagaatctccatc
acctttttccgtcttttccgagtgatgcggttggtgaagcttctcagcagaggggaaggc
atccggactctgctatggaccttcattaagtccttccaggcactcccatatgtcgccctc
ctcattgccatgctcttcttcatctacgccgtcattggcatgcagatgtttgggaaggtt
gccatgagagataacaaccagatcaataggaacaacaacttccagacgtttccccaggca
gtgctgctgctcttcaggtgtgcaacaggggaggcctggcaggagatcatgctcgcctgc
ctccctgggaagctgtgtgacccggactcagattacaacccaggagaggaatatacttgt
gggagcaactttgccattgtctacttcatcagcttttacatgctctgtgcgttcctgatc
atcaacctcttcgtggctgtcatcatggacaattttgactatctgacgagggactggtct
attctggggcctcaccacttggacgaattcaaaagaatatggtctgaatatgaccccgag
gcaaagggaaggataaaacaccttgatgtggtcactttgctccgacgtatccagcctccc
ctgggatttggaaagttgtgtccacaccgagtggcgtgtaagagattggtcgccatgaac
atgcctctcaacagtgatgggacagtcatgttcaatgcaactctgtttgctttggtacgg
acggctctcaagatcaagactgaaggcaacctggagcaagctaatgaagagctccgcgct
gtgataaagaaaatctggaagaagacaagcatgaagctacttgaccaagttgtccctcca
gctggtgatgatgaggtaaccgtggggaagttctatgccactttcctgatacaggactac
tttaggaaattcaagaagcggaaagagcaaggcctggtggggaaataccctgcgaagaac
accacgatcgccctacaggcgggattaaggaccctgcatgacattgggccagaaatccga
cgggctatatcctgtgacttgcaagatgacgaaccagaagactccaaaccagaagaggaa
gatgtattcaaaagaaatggtgccctgcttggaaactatgtcaatcatgttaatagtgat
aggagagagtcccttcagcagaccaataccacccaccgtcccctgcatgtccaaaggcct
tcaattccacctgcaagtgatactgagaaaccgctgtttcctccagcaggaaattcggtg
tgtcataaccatcataaccataattccatagggaagcaagttcccacctccacaaatgcc
aatctcaataacgccaatatgtccaaagctgcccacggaaagcggcccagcattggggac
cttgagcatgtgtctgaaaacggccattactcctacaagcacgaccgagagcttcaaaga
aggtccagtattaaaagaacccgctattatgaaacttacattaggtctgagtcaggagac
gagcagcttccaaccatttgccgtgaagaccctgagatacacggctacttccgagacccc
cgctgcttcggggagcaggaatatttcagtagcgaggagtgctgtgaggatgacagttct
cccacctggagcaggcaaaactacagctattacaacaggtacccaggcagctccatggac
tttgagaggccccgaggctaccatcacccccaaggtttcttagaagatgacgactctccc
attggctatgactcacggagatctccaagaagacgccttctacctcctaccccaccatcc
catcggaggtcctccttcaactttgagtgtctgcgcaggcaaaacagccaagatgacgtc
cttccgtcgcctgccctgcctcaccgcgctgccctgcccctgcaccttatgcagcagcag
atcatggccgttgcaggcctagattccagtaaagcccagaagtactcgccgagccactct
acccggtcatgggccacccctccagcaacccctccgtaccgagactggaccccatgctac
acccctttgatccaggtggatcgctcagagtctatggaccaggtcaatggcagcctgccg
tcgctacaccgcagttcctggtatacagatgaacccgacatctcctataggactttcaca
ccggccagcctgaccgtccccagcagcttccggaacaaaaacagcgacaagcagaggagt
gcagacagcctggtggaagcagtcctgatatccgaaggcttgggacgctacgcaagggac
ccaaaatttgtctcagcaacaaaacatgagatcgccgatgcctgtgacctaaccatagac
gagatggagagcgcggccagcaccctgctcaatggaagcgtgtgtcctcgagccaacggg
gacatgggccccatctcacaccgccaggactatgagctccaggactttggtcctggctac
agtgacgaggaaccagaccctgggcgagaggaagaggacctggcagatgaaatgatttgc
atcaccaccttgtag
DBGET
integrated database retrieval system
