Rattus norvegicus (rat): 297333
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Entry
297333 CDS
T01003
Symbol
Smyd1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00310
Lysine degradation
rno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
297333 (Smyd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
297333 (Smyd1)
Enzymes [BR:
rno01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
297333 (Smyd1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
297333 (Smyd1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
297333 (Smyd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
DUF3369
Motif
Other DBs
NCBI-GeneID:
297333
NCBI-ProteinID:
NP_001100065
RGD:
1305105
Ensembl:
ENSRNOG00000006776
UniProt:
D4A3D2
A6IA68
LinkDB
All DBs
Position
4:complement(104757281..104811307)
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AA seq
490 aa
AA seq
DB search
MTVGSMENVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQE
RLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARIMWRVEREGTG
LTEGCLVSVDDLQNHVEHFGEEEQKELRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCN
GFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALG
KISEGEELTVSYIDFLHLSEERRQQLKKQYYFDCSCEHCQKGLKDDLFLAVKEDPKPSQE
VVKEMTQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIVSEV
LSYLQAFEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY
AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQPMQVMAEPSNE
PAPALFHKKQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaggcagcatggagaatgtggaggtctttacttccgagggcaaaggcagagga
ctgaaggccacgaaggagttctgggctgcggatgtcatctttgctgagagggcttattcg
gcagtggtttttgacagcctcattaacttcgtgtgccacacctgcttcaagaggcaggag
aggctccatcgctgcgggcaatgcaagttcgcccattactgcgaccgcacatgccagaag
gatgcctggctgaaccacaagaacgagtgctctgccatcaagagatacgggaaggtgccc
aacgaaaatatcaggctggcagcccgcatcatgtggcgggtggagagagagggcactgga
ctcacagagggctgcctggtgtcagtggatgacttacagaaccatgtggagcactttggg
gaggaggagcagaaggaactacgagtagacgtggatacattcttgcagtactggccacca
cagagccagcagttcagcatgcagtacatctcacacatctttggcgtgatcaactgcaat
ggtttcacactcagtgaccagagagggctacaggcagtgggcgtgggcatcttccccaac
ctgggcctggtgaaccatgactgctggccaaactgcactgtcatattcaacaatggcaat
catgaggcggtgaaatccatgtttcacacgcagatgaggattgagctccgggccctgggc
aagatctcagaaggtgaggagctgacggtgtcctacatagacttcctccacctcagcgag
gagcgcaggcagcagctgaagaagcagtactactttgactgctcctgtgaacactgccag
aaggggctgaaggacgacctcttcctggcagtgaaggaagaccccaagccctcccaggag
gtggtgaaggagatgacacaattctcaaaggatacactggaaaaaatagacaaggctcgc
tctgagggtttgtatcacgaggttgtgaagctgtgtcgggagtgcctggagaagcaggaa
ccagtgtttgctgacaccaacctctacgtgcttcggttgctaagcattgtgtcagaagtc
ctctcctacctccaggcctttgaagaggcctcccattatgccaggaggatggtggatggc
tacatgaaactctaccaccataacaatgcccaactgggcatggctgtgatgcgggcaggg
ctgaccaactggcatgctggtcacattgaagtagggcacgggatgatctgcaaagcctat
gctattctcctggtgacccatggaccctcccaccctatcaccaaagacttagaggccatg
cggatgcagacagagatggagctgcgtatgttccgccaaaatgaattcatgtaccacaaa
atgcgagaggctgccctgaacaaccagcccatgcaggtcatggctgagcccagcaacgag
ccagccccagctctgttccataagaagcaatga
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integrated database retrieval system
