Rattus norvegicus (rat): 297893
Help
Entry
297893 CDS
T01003
Symbol
Hdac1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
rno03083
Polycomb repressive complex
rno04110
Cell cycle
rno04213
Longevity regulating pathway - multiple species
rno04330
Notch signaling pathway
rno04350
TGF-beta signaling pathway
rno04613
Neutrophil extracellular trap formation
rno04919
Thyroid hormone signaling pathway
rno05016
Huntington disease
rno05031
Amphetamine addiction
rno05034
Alcoholism
rno05165
Human papillomavirus infection
rno05169
Epstein-Barr virus infection
rno05200
Pathways in cancer
rno05202
Transcriptional misregulation in cancer
rno05203
Viral carcinogenesis
rno05206
MicroRNAs in cancer
rno05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
297893 (Hdac1)
03083 Polycomb repressive complex
297893 (Hdac1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
297893 (Hdac1)
04350 TGF-beta signaling pathway
297893 (Hdac1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
297893 (Hdac1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
297893 (Hdac1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
297893 (Hdac1)
09149 Aging
04213 Longevity regulating pathway - multiple species
297893 (Hdac1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
297893 (Hdac1)
05202 Transcriptional misregulation in cancer
297893 (Hdac1)
05206 MicroRNAs in cancer
297893 (Hdac1)
05203 Viral carcinogenesis
297893 (Hdac1)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
297893 (Hdac1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
297893 (Hdac1)
05165 Human papillomavirus infection
297893 (Hdac1)
09164 Neurodegenerative disease
05016 Huntington disease
297893 (Hdac1)
09165 Substance dependence
05031 Amphetamine addiction
297893 (Hdac1)
05034 Alcoholism
297893 (Hdac1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
297893 (Hdac1)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
297893 (Hdac1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
297893 (Hdac1)
HDAC complexes
Sin3A-HDAC complex
297893 (Hdac1)
BRAF-HDAC complex
297893 (Hdac1)
REST complex
297893 (Hdac1)
SHIP complex
297893 (Hdac1)
MiDAC complex
297893 (Hdac1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
297893 (Hdac1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
297893 (Hdac1)
Chromatin remodeling factors
NuRD complex
297893 (Hdac1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
297893
NCBI-ProteinID:
NP_001020580
RGD:
1309799
Ensembl:
ENSRNOG00000009568
UniProt:
Q4QQW4
A6ISJ4
LinkDB
All DBs
Position
5:complement(147138328..147165387)
Genome browser
AA seq
482 aa
AA seq
DB search
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
MA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagactcagggcaccaagaggaaagtctgttactactacgacggggatgttgga
aactactattatggacaagggcacccaatgaagcctcaccgaatccgaatgactcataat
ttgctgctcaactatggtctctaccgaaaaatggaaatctatcgtcctcacaaagccaac
gctgaggagatgaccaagtaccacagcgacgactacatcaagttcttgcgttctattcgc
ccagacaatatgtctgaatacagcaagcagatgcagagattcaacgtgggtgaggactgt
ccggtatttgatggcttgtttgagttctgtcagttgtccacgggtggctctgtcgcgagt
gctgtgaaactcaataagcagcagacggacatcgctgtgaactgggctgggggcctgcac
catgcgaagaagtctgaagcatccggcttctgttacgtcaatgatattgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgacattcaccatggc
gatggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaa
tacggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tactacgccgttaactacccactgcgagatggcattgatgatgagtcctatgaagccatc
tttaagccagtcatgtccaaagtaatggagatgttccagcctagtgcagtggtcctacag
tgcggctcagactccctgtctggggatcggctaggttgcttcaatctgaccatcaaagga
catgccaagtgtgtggagttcgtgaagagtttcaacttgccgatgctaatgttgggagga
ggtggctataccatccgtaatgtcgctcggtgctggacttacgagacagctgtggccctg
gacacagagatccctaatgagctaccatacaatgactactttgaatactttggaccagat
ttcaagcttcacatcagcccttccaatatgactaaccagaacactaatgaatacctggag
aagatcaagcagcggctctttgagaacttgagaatgctgccccatgcccctggggtccaa
atgcaggccatcccagaggatgccatcccagaagagagcggtgatgaggatgaggaagac
cctgacaaacgaatttccatctgctcctctgacaaacgcattgcctgtgaggaggaattc
tctgattctgatgaggagggagaaggaggtcgcaagaactcttctaacttcaaaaaagcc
aaaagagtcaaaacagaagatgaaaaagaaaaagatcccgaggagaaaaaagaagtcaca
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaagaagaggtcaag
atggcctga
DBGET
integrated database retrieval system