Rattus norvegicus (rat): 297899
Help
Entry
297899 CDS
T01003
Symbol
Ldc1
Name
(RefSeq) antizyme inhibitor 2
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00330
Arginine and proline metabolism
rno00480
Glutathione metabolism
rno01100
Metabolic pathways
rno04148
Efferocytosis
Module
rno_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
297899 (Ldc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
297899 (Ldc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
297899 (Ldc1)
Enzymes [BR:
rno01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
297899 (Ldc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
297899
NCBI-ProteinID:
XP_232777
RGD:
1562036
Ensembl:
ENSRNOG00000024788
UniProt:
F1LVE6
LinkDB
All DBs
Position
5:complement(147835302..147847392)
Genome browser
AA seq
457 aa
AA seq
DB search
MRGTEERGWVHKTVLSMMPELCMANISTRVSGMTTPSEGRREPLGVTESLWPSEPITLGP
ETSARQLVLKKIQDLSISGHQDPFMVADLDVLASRHQTFLQALPRVWPFYAVKCNNRPSL
LLVLAALGTGFDCASQGELEQVLGLGVAPSRIIFANPCKAVSHIQYAARCGVQLLTFDSE
EELTKLARHHPGARLILRIQTLGGRSTFPLHTKFGARLLACGRLLQVARELGLAVVGASF
HVGSDCHTPQSYRQAIADCHRVFEMGCKAGHQMSLLDLGGGFPGIEGSEAKFEEMARVVN
AALAQYFPEGTGVEVIAEPGRFYAESVCTAAVNIIAKKASLEPGGHRKLAYYLNEGHYGA
FRIFLRDPVPRIPIVVKELPSDPHLFPCTLYGPTCDAFDRLFSTEVQLPELDVGDWLVFP
DMGAYRSTMSSTFNGFPITTVYDAMSPQLRSLLETVP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggacggaagaaagaggctgggtccacaaaactgtcctttctatgatgccagaa
ctgtgcatggcaaacatctcaactagagtctcagggatgaccaccccctctgagggtagg
agggagccgctgggagtcacagaaagcctgtggccatcagagcccatcaccctggggccg
gagacatctgcccggcagctggtcctgaagaagatccaggacttgtccatctcgggccac
caagaccccttcatggtggctgacttggatgtgctggccagccgacatcagaccttcctc
caggccctgccccgagtctggcccttctacgcggtcaagtgtaacaataggcccagcctg
ctgctcgttttggctgccctgggcaccggctttgactgtgccagccagggggagctggag
caggtgctgggcttgggcgtggccccctcacgaatcatcttcgccaatccctgcaaggcc
gtctcccacatccagtacgcagcccgctgtggggtgcagcttctgacctttgacagtgag
gaggagctgactaagctggcccggcaccaccctggggctaggttgatcctccggatacag
accctgggtggtcgaagcaccttcccactgcacaccaagttcggagcccgtttgttggca
tgtggacgcctgctccaagttgccagagagctggggttggctgtggtgggggcctccttc
cacgtgggttccgactgccacacaccccagagctacaggcaggccatcgctgactgccat
cgtgtgtttgagatgggctgcaaggctggccaccaaatgagcctcctggatcttggtggg
ggcttcccaggaattgagggctctgaagccaaattcgaggagatggcgagagtggtcaac
gctgccctggcacagtacttccctgaggggaccggtgtcgaggtcattgcggagcctggc
cgcttctatgcagagtccgtgtgtacagctgccgtgaacatcatagccaagaaggcctcc
ctggagccaggaggccacaggaagctggcatactacctcaatgagggccattatggtgcc
ttccgaatctttctcagggatcctgtccccaggatacccatagtggtaaaggagttaccc
tcggatccccatctcttcccctgtactctttatggccccacctgcgatgcctttgaccgg
ctcttttcaacagaggttcagttgccagagctggatgtgggtgactggctggttttccct
gacatgggtgcctaccgtagcaccatgagttccaccttcaatggcttcccaatcacaact
gtctatgatgccatgagccctcaactcaggagcctactggagacagtaccttaa
DBGET
integrated database retrieval system