Rattus norvegicus (rat): 298095
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Entry
298095 CDS
T01003
Symbol
Prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
298095 (Prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
298095 (Prpf4)
Spliceosome [BR:
rno03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
298095 (Prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
298095
NCBI-ProteinID:
NP_001100129
RGD:
1311303
Ensembl:
ENSRNOG00000014777
UniProt:
D4A7J8
A6J7U4
LinkDB
All DBs
Position
5:80875511..80889501
Genome browser
AA seq
521 aa
AA seq
DB search
MASSRASSTTTKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcacgagcctcctccacgacaaccaaaactaaagcacctgacgatttagtt
gctcctgttgtgaagaaaccacacatctattatggaagcttggaagagaaagagcgggaa
cgcctggccaaaggagagtctgggattttgggaaaagaaggactcaaagccggcattgaa
gcaggaaatattaatataacgtctggagaagtctttgaaattgaggagcacatcagtgag
cggcaggctgaagtcttggcagagtttgaaagaagaaagcgagcccggcaaatcaatgtt
tccacggatgactcagaggtcaaggcttgccttagagccttgggagaaccgatcacactt
tttggagagggccctgctgaacgaagagaaaggttaagaaatattctctcagtggttggg
actgatgccttaaaaaagacaaaaaaagatgatgaaaaatctaagaagtcaaaagaagag
tatcagcaaacctggtaccatgaagggccaaatagcctgaaggtggccagattgtggatt
gccaattattcactccccagggcaatgaaacgcttggaggaggcccgtctccataaggag
attcccgagaccaccagaacctcccagatgcaggagctgcacaagtctctccggtctttg
aataatttctgcagtcagattggagatgaccggccaatctcctactgtcacttcagcccc
aattctaaaatgctagccacagcttgttggagtgggctctgcaagctctggtctgtccct
gactgcagcctccttcacactcttcgaggccataatacaaatgtcggagcaattgtattc
catcccaaatccactgtctccttggaccaaaaagatgtcaacctggcctcttgtgctgct
gatggctctgtgaagctttggagtcttgacagtgatgagccagtggcagatattgaaggc
catacagtccgtgtggctcgggtaatgtggcatccgtcagggcgtttcctgggcacaacc
tgttatgaccgttcatggcgcttatgggatttagaggctcaagaggagattctacaccag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcctttggccgagtttgggacctacgcacaggacgctgcattatg
ttcctagaaggccatctgaaggagatctacgggataagtttctcccccaatggctaccac
attgccactggcagtggtgacaacacctgcaaggtgtgggatcttcgacagcgacgctgt
gtctacaccatccccgcccatcagaacttagtgactggtgtcaagtttgagcctatccat
ggggacttcttgctcacgggtgcctatgacaacacagccaagatctggacccacccaggc
tggtccccactgaagactctggctgggcatgagggcaaagtgatgggcctagacatttct
tctgatgggcagctcatagccacttgctcatatgacagaaccttcaagctctggatggca
gagtag
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integrated database retrieval system
