Rattus norvegicus (rat): 298185
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Entry
298185 CDS
T01003
Symbol
Frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 precursor
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
298185 (Frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rno04091
]
298185 (Frem1)
Lectins [BR:
rno04091
]
C-Type lectins
Lecticans
298185 (Frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
298185
NCBI-ProteinID:
NP_001398464
RGD:
1306981
Ensembl:
ENSRNOG00000022309
LinkDB
All DBs
Position
5:complement(102367201..102515464)
Genome browser
AA seq
2167 aa
AA seq
DB search
MHSPGCTGPKALLFLLLQLLMLHLDPANATFISINRGLRVMKGSSAFLSGDHLRFAIPKE
KDACRVEVVMNEPITQRVGKLIPQVFDCHFLPNEVQYVHNGCPILDEDSVKLRLYRFTET
ETFMETFLLRVSLVEPDCNIIRLSSNVLEVTEFYGLSQAIDKNLLQFDYDRTASLDCTIR
VDPVKTQLPAHGKLVVVNRKSEGPRGDQPHSFFSESQLGAERKCPDGSCTLEPKQVTSLK
VSCEDFLLTGFHYQHMQPPSPNIDYIPIQLDLTDRRSKTIYKSESAWLPVFIRVGIPNQA
PRAAFMAMFVLEVDQFILTPLTTSVLDCEEDETPKPLLVFNITEAPLQGYVTHLLDHTRP
ISSFTWKDLSDMQVAYQPPNNSHPERRHYKMELEVYDLFFERSAPITVHISIRTADTNAP
RVSWNTGLNLLEGQSRAITWEQFQIVDNDDIGAVQLVTIGGLQHGRLTVREGKGFLFTVA
DLQAGVVRYHHDDSDTTKDFVAFRIFDGQHSSHHKFPINILPKDDSPPFLITNVVIELEE
GKTILIQGSMLRASDMDSSDDYIFFNITKFPQAGEIMKKPGPRLIGYPVSGFLQRDLFSG
IIYYRHFGGEIFEDSFEFVLWDSHEPPNLSVPQVVMVHITPVDDQLPKEAPGISRHLIVK
ETEVAYITKKHLHFLDTESHGGELVYTITRPPCFSSSHRHLDAGKLFMVDSIPKPTKNPT
APGLNSFTQHAVNHMKVAYMPPMQDIGPTPRHVQFTVSVSNQHGGTLHGICFNITVLPVD
NQVPEVFTNTLRVAEGGQCTISTEHILVSDVDTPLDSICLSLQEMPLHGGVELDGFPLNP
RGTFSWRDLHTLKVRYQHDGSEVLQDEIFLEVTDGTNSAGFVLYIEVFPVNDEPPVLKAD
LIPMMHCSEGGEVTITPEYIFATDADSNDSELLFLITREPRHGVVRKAGLRVDRFSQGDV
ISGAVAYKHTGGEIGLESCFDTVVLVVSDGEADPLVNGCCYNGPDSSVPLHKSFPTYQLN
ITVHPVDNQPPSIIIGRTLTVDEGFSAALTTHHLTATDWDTAPDDLEFILVSHPQFGYLE
NTLPSAGFEKRNTGISIASFQWRDMKASHINYVQSRHLREEPTADEFLVYATDGKQRSLE
TTFHVIINPTNDEAPDFVVQNITVYEGHMVELDSAIISATDRDVPKDPLLFNITHKPKHG
LLLISATSKDAHNEIHNFSMELLQNGMKLAYAHDDSESSADNFVIQLSDGKHKILKTVSV
SITPVNDETPTLSKKAEVSVTVGDTRVLSSAVLSAIDKDSPREKIHYLFERLPQNGQLQL
KIGRDWVPLSAGMQCTQEDVDLNLLRYAHAGKMHSQDGDRFTFYLWDGDNRSPAFDCHII
IEDTGRGDIVIHAKPLVVANGDRGLLTPATLLAEDGADKAEELLYLITSPPQYGQVEYVY
SPGVPITSFSQMDIAGQAVCYIHKSRTAVLSDSFRFTISNGLQTQQGVFEITLQGVDSAL
PVLTRNRRLRLVEGAMGLLSTDHLQLTDPDTPPENLTFFLVQLPRHGYLYLRGKVLQHNF
TQQDVDSRVVAYQHAGGGAQEDCFTFLATDRKNQGFVVDGKVQKEPVLFIIQVDQLDKKA
PRITRLHSPSQVGLLKNGCYGIYITSHVLKASDPDTEDDQIIFKILRGPLHGRLENTTTG
EFIHEQFSQKDLSRKTILYIINPSLQVNSDILEFQAMDPTGNTAPPQRLELKWSYIEWSQ
TEYEVCENVGLLTLEVTRRGYSMDSAYVDIEVNQVSAVVGKDFTVTPSKLLQFDPGMSTK
MWNIAITYDGLEEDDEVFEVILNSPVNAVLGTQTKAAVKILDSKGGRCHPSNSFNQSKHS
TWGKGRWHPLPSGSSSLTTSGSPHLERRPPPSITKGDALRGFDLTDLSQRKMTTQGNGKS
VLPSSVCRNGTDTIYNYHGIVSLKLEGDRFSAHKRKAKISVIRQPQRTVKVAELPLADKV
EPTTDSNFLSQGLRPLFPKNCSVELKGLFHLEEHTHRLYQCDGIAWNVWSSQTKGLEDRS
CPVGWLLHSDYCHVLVTRQKGTWATATRACREQHQGTLVTVFSRRHMQWLWAISGRKPFW
IGLKNQVRTGHWEWIGGEPVAFTNWRRGPPLHPKPGKNCVLVQRRGQWQTKNCSKGKAHN
FVCSRKL
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgcactctccaggctgcactgggcccaaggctctgttgttcttgctgctccagctgctt
atgctacacctggacccagccaatgccaccttcatcagcattaaccggggcctgagggtg
atgaagggtagttctgccttcctgtctggagatcacctgaggtttgccatccctaaagag
aaggacgcttgcagagtggaggtggtgatgaatgaacccataacccagagggttgggaaa
ctcattccacaggtctttgattgccattttcttcccaacgaagtacaatatgttcacaat
ggatgcccaattctggacgaagactctgtgaagcttagactttacaggtttactgaaaca
gagactttcatggaaaccttcctcttgcgggtctctcttgtggaaccagactgtaacatc
atccgcctgagcagcaacgtgttggaagtgactgaattctatggcttatcccaagccatt
gataagaacctgctccagtttgattatgataggacagccagtctggactgcaccatcaga
gtagaccccgtgaagactcagctgccagcccatggcaagctggttgtggtgaatcggaag
tcagagggaccgcgtggagaccagccacacagctttttctctgagtcacagctaggggca
gaacggaagtgtccggatggaagctgtactctggaaccgaagcaagtgacaagtctgaaa
gtgagctgtgaggacttcctgctgacagggtttcactaccaacacatgcagcccccttca
cccaacattgactacatccccattcagttggatctcacagacagaaggagtaaaaccatt
tacaagtcagagagcgcgtggttgcctgtcttcatcagagttggcattcctaaccaggcc
ccaagggctgctttcatggccatgtttgttctggaggtggaccagttcatattgacccct
ctgacaacctccgtgctggactgtgaggaggatgagactccgaaacccttgctggtgttt
aacatcactgaagccccactccagggctatgtgacccacctgctggatcataccagaccc
atctcttcatttacctggaaggatctcagtgacatgcaagttgcctaccagccaccgaac
aacagccaccctgagaggagacattacaagatggagctggaggtgtacgacctcttcttt
gagaggagcgcccccatcacagttcacatctccatcagaacagcagacacgaatgcacct
cgggtgtcctggaatacaggtttgaatctcctagaggggcagtctcgggccatcacttgg
gaacagtttcagatcgtggacaatgatgacattggtgctgtgcagttggtcaccattggt
ggtctgcagcatggacggcttacagtaagagaggggaaaggatttctcttcaccgtggct
gatcttcaggctggagttgttcgctatcatcatgatgacagtgataccaccaaagacttt
gtggctttcaggatattcgatggccaacacagcagccatcacaagtttcctatcaacatc
ttgcctaaagatgacagtcccccattcctcataaccaatgtcgtgattgaactagaagag
gggaagaccatcttgatccaagggtccatgctgagagcttcagacatggactccagtgat
gactacatcttcttcaatatcacaaagttcccacaggctggggagatcatgaagaagcca
gggccaagattgataggatatcctgtctctggcttccttcagagagacctgttcagtgga
atcatttactatcgtcactttggtggagaaatctttgaagattcttttgaatttgtcctg
tgggacagccatgaacctccaaatctctcagtgccacaggtggtgatggtccatataact
ccagtagacgaccagcttcccaaggaagctcccggcatatcccggcatttgattgtcaag
gaaacggaagtggcctacatcactaaaaagcacctacatttcctagacacggaatcgcat
ggtggggagcttgtctacacaataacacgccctccatgcttctcctccagccacaggcac
ttggatgctgggaagctgttcatggtggacagcataccaaagccaaccaagaatcccaca
gccccagggctgaactcatttactcagcatgctgtgaaccacatgaaagtggcctacatg
ccacccatgcaggatataggtcccacacctcgacatgtgcagttcacagtgtccgtcagt
aaccagcatggaggtactttgcatggaatctgcttcaacatcacagtgctcccagtggac
aatcaggttcctgaggtattcaccaacaccctgagagtggctgagggtggccaatgcacc
atcagcacagagcacattttggtttctgatgtggacaccccactggacagcatctgcctc
tctcttcaggagatgcccctgcatggcggggtagagctggatggatttcctctaaaccca
agaggcacattttcttggcgagacctccataccttaaaagttaggtatcaacatgatgga
tctgaggttcttcaggatgagatattcttggaggtcacagacggcacaaattctgcagga
tttgttctctacattgaggtattccctgtgaatgatgagccacctgttctaaaggctgac
ctcattcccatgatgcactgctcagagggtggagaggtgaccatcacccctgaatacatt
ttcgctactgatgcagacagcaatgactcagaactgctatttctgattacccgagaacct
cggcatggagtagtgagaaaagctggactccgtgtggacaggttctctcagggagatgtc
atctcaggagctgtggcatacaaacatacaggtggcgagattggcctcgaatcttgtttt
gacactgttgtattggtggtttcggatggtgaagctgaccctttggtgaatggctgttgc
tacaatggacccgattcatctgttcctcttcataagtccttccccacataccagctcaac
atcacggtgcatccagtcgacaatcagccaccttcaattataataggtaggacgctcacg
gtggacgaaggcttctcggcagcccttacgactcatcacttgactgccactgactgggac
actgctccggatgacttggaattcattttggtttctcatccccagtttggctacctagaa
aacacactgccctctgcaggctttgagaaaaggaatacgggcataagcatagcttcattc
cagtggagagacatgaaagcttcgcatattaactatgtgcagtccaggcacctgagggag
gagccaactgctgatgagttcctggtgtacgccacagatgggaagcaacgctccttggag
accacatttcacgttatcatcaaccccacaaatgatgaagctcctgattttgtggtacag
aatatcactgtgtacgagggccacatggtagagctggattctgccatcatcagtgctact
gacagggatgttcccaaggaccccttgctcttcaacatcacgcacaagcccaagcatggc
ctcctcctcatctcggccaccagcaaggatgctcataatgaaattcacaacttctccatg
gaactgctccagaatggaatgaagctggcgtatgcccacgatgactcggagagctctgct
gacaacttcgtgatccagttatcagacgggaaacataaaatccttaaaaccgtttcagta
agcatcaccccagtgaacgacgagacaccaacactaagcaagaaggctgaagtctcagtg
actgtgggcgacactcgtgttctgtctagtgctgttctttcagccatagataaagactca
cccagggagaagattcactacttatttgaaagacttccccaaaatgggcaacttcaactt
aagatagggagggactgggtccctctctccgctggcatgcagtgcacccaggaggatgtg
gacttgaacttgctaagatacgcgcatgctggtaaaatgcattcccaggatggagaccgc
tttaccttctacctctgggacggggacaacaggtcacctgcatttgactgtcacatcatc
attgaagacacaggaagaggtgatattgtcattcatgcgaaaccactcgtggtagccaac
ggtgacagaggtctcttgacgcctgccactcttctggctgaggatggagcagacaaggct
gaggaattactctaccttatcacttccccaccacagtatggccaagtggagtatgtctac
tctcctggagtccccattaccagctttagccaaatggacatagcaggacaggcagtctgc
tacatacacaagagcaggaccgctgtcctcagtgacagtttcagatttaccatcagcaat
ggactgcagacccagcagggggtgtttgagatcacactgcagggtgtggacagtgccttg
cctgtgctgaccaggaaccgaaggctgaggcttgtggaaggggccatgggcctgctgtcc
acggatcaccttcagctgactgaccctgacacacctccagagaacctaaccttctttctg
gtccagctcccgcgccacgggtacctctacctgagagggaaagtacttcagcacaacttc
acccagcaagatgtagacagcagggttgtggcctaccagcatgcaggaggcggtgcccag
gaggactgctttactttcctggccacagacaggaagaaccaaggcttcgttgtggatggg
aaagttcagaaagagcccgttctcttcattatccaggtggaccagctggataagaaggcg
cctcggatcacacgcttgcactccccttctcaagtggggctcttgaaaaatggctgctat
gggatttacatcacttcccatgtgctaaaggcgtctgaccctgacacagaggatgaccag
atcatctttaagattttacgaggcccgttgcatggacgtctggagaacacgacaacaggt
gaattcatccacgagcaatttagccagaaggacttgagccgcaagaccatcctttatatc
ataaacccttctttgcaagtgaattcagatatcctggaatttcaggccatggaccccaca
gggaacactgcccctccccagagattggaactgaaatggtcatatattgaatggtcccag
actgaatatgaggtctgtgagaatgtgggcttactgaccttggaagtcaccagaagggga
tattccatggactcagcctatgtggacatagaggttaaccaagtgtcagctgtagttgga
aaagattttactgtcactccatccaaactgcttcaatttgacccaggaatgtcaactaag
atgtggaatatagcaattacctatgacggattagaggaagacgatgaggtctttgaagta
attctgaactcccctgtgaatgcggttcttggcacacagacaaaagcagcagtgaaaatt
ttggactcaaaaggaggacggtgccatccttcaaattccttcaaccaaagcaagcacagc
acgtgggggaagggacgttggcatccactgccctcagggtcatcctcactcaccacttcc
ggttctcctcatctggaaagaaggccccctccatccatcaccaaaggagatgctcttcgg
ggttttgatctcacagacctctctcaaaggaagatgacgacacaggggaatggcaaatca
gtcctcccatcctctgtttgtagaaatggaacagacaccatctacaattatcatggtata
gtttccttgaaactggagggggacagattctcagctcacaaacggaaggccaaaatatcc
gtcattcgtcagccacagaggacagtcaaggtggcagagctgcctctagccgataaggta
gaacccacaaccgactcgaactttctcagtcagggtctacggcccttgtttccaaagaac
tgttctgtggaattaaagggactctttcatttggaagaacacacccacagattgtatcaa
tgtgatgggatcgcctggaacgtctggagctcccaaaccaaggggctggaggacagatcc
tgcccagttggatggcttcttcattccgactactgtcacgtcttggtcacaaggcagaaa
ggcacctgggccacagctacccgagcttgcagagaacagcaccagggcacccttgtgacc
gtattctccaggaggcacatgcagtggctgtgggctatcagcggaagaaagcccttctgg
ataggcttgaagaaccaagtgcgaactggccactgggagtggattggaggtgaacctgtt
gctttcaccaactggaggagagggccccctctgcacccgaagcctggaaagaactgtgtt
ttggttcaaagaagaggacaatggcaaacaaagaactgtagcaaaggcaaggctcacaat
tttgtgtgctcaaggaaactctga
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integrated database retrieval system
