Rattus norvegicus (rat): 298247
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Entry
298247 CDS
T01003
Symbol
Mysm1
Name
(RefSeq) deubiquitinase MYSM1 isoform X7
KO
K11865
histone H2A deubiquitinase [EC:3.4.19.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
298247 (Mysm1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
298247 (Mysm1)
Peptidases and inhibitors [BR:
rno01002
]
Metallo peptidases
Family M67
298247 (Mysm1)
Ubiquitin system [BR:
rno04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
298247 (Mysm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
JAB
Prok-JAB
Myb_DNA-bind_7
Myb_DNA-bind_6
Myb_DNA-binding_2
UPF0172
Motif
Other DBs
NCBI-GeneID:
298247
NCBI-ProteinID:
XP_006238471
RGD:
1311787
Ensembl:
ENSRNOG00000026299
UniProt:
A0ABK0MAV2
LinkDB
All DBs
Position
5:complement(114877112..114981463)
Genome browser
AA seq
796 aa
AA seq
DB search
MSILLLNDGNTASVFQDHYLDSTWRRENGCLPWTLDSTISDENRAVIEKMLLEEEYYLSN
KSLPGKFWVNQKENDKKCTNSLQKTGKIMVRSPAKPSSYSVKWTIEEKKLFEQGLAKFGR
RWTKIAALVKSRTVLQVKSYARQYFRNKVKWGAEKETPTLKSNSDLQVKNKDERTKVWVA
SDPNLNAVKIEKLSDDEDVDITDELDELTSQTSQKNYGGHLTLDVPSSKMYKTNQGELCQ
EGSLAKSAEENLQNVKQSEAEACSSSEIMSWAEKQNNNGKNSVELNEKYSKLVEEYTMLT
EETKHSPSPEPCEGQKDPRGNELLLPPCQVEEENHEGEELKPPEQEVEIDRNVIQEEEKQ
AIPEFFEGRQTKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTY
LELIGAINFGCEQAIYNRPQPVDKVRVTDRKDAEAAYQLAWRLQSMRTRRRRVRDPWGNW
CDAKDLEGQTFEHLSVEELARREEEEKCKPIKFSKASKLPKSSLDPFQLIPCHFFSGEKQ
EPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSEADKVLEVCAAEPCNSLSTGLQCEM
DPVSQTQASETLALRGCSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIV
SPYNRSNPLPYSQITCLVISEELSPDGTYRLPYKFEVQQMLEEPQWELVFEKTRWIIEKY
RLSHSSVPMDRIFRRDSDLTCLQKLLECLRKTLSKVANCFIAEEFLTQVENLFLSNYKSK
EENGLAEENSAKELFM
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcttactgttaaatgatggaaatacagcatcagtttttcaagatcactatctt
gattcaacatggagaagggagaatggctgtcttccttggactctggatagcaccatcagt
gacgaaaacagagctgtcattgagaaaatgctgttggaagaagagtattatttatctaat
aaatcacttccaggaaaattctgggttaatcaaaaggaaaatgataaaaaatgcacgaac
agcctacagaaaacaggaaagatcatggtacgttctcctgcaaaaccatccagttattca
gtaaagtggacgatagaagagaaaaaactgtttgaacaaggactggctaaatttggccga
agatggaccaaaatcgcagcactagttaaaagtcgcacagttttacaagtgaagagttat
gccagacaatacttcagaaataaggtaaagtggggtgcggagaaagaaacaccaactttg
aagagcaacagtgatcttcaggttaaaaataaagatgaaaggacaaaggtgtgggtcgca
tcagatcccaaccttaatgctgtaaaaatagagaagttgtctgatgatgaagatgtagac
atcaccgatgagctggatgagttgacttctcaaacatcacaaaagaattatggcggccat
cttactttagatgttcctagtagtaaaatgtataagaccaaccaaggagaattatgccaa
gaaggttcattagctaaatctgcagaagaaaatcttcagaatgtgaagcaaagtgaagca
gaagcatgttcaagctcagaaattatgtcatgggctgaaaaacaaaataataatggcaaa
aactcagttgaattaaatgagaaatacagtaaactggttgaggaatacactatgctaaca
gaggaaaccaagcactcaccttctccagagccctgtgagggtcagaaggacccacgtgga
aatgaactgcttttgcctccttgccaagtggaggaggaaaaccatgaaggagaagagctt
aagccaccggaacaagaagtagaaatagatagaaatgtcattcaagaagaagaaaagcaa
gcaattcctgagttttttgaggggcgtcaaactaaaacaccagaacgctatttgaaaatt
agaaactacattttggatcagtgggaaatatgcaaaccgaaatacttaaataagacctca
gtacgtcctggcctgaagaactgtggggatgttaattgtattggacggattcatacatac
ctcgagttgataggagcaatcaattttggatgtgagcaggccatatacaacaggccacaa
ccagttgataaagtccgagtgaccgacagaaaagatgcagaagcagcataccagcttgcc
tggcgcctgcagtccatgagaacaaggagacgtagggtccgagatccatggggaaactgg
tgtgatgcaaaagacttagaagggcaaacatttgagcatctatctgtggaggagttggca
agaagagaagaggaggaaaagtgcaaacctattaaattttcaaaagcttcaaaacttccc
aaaagctcacttgatcccttccaactgataccttgtcattttttcagtggagaaaagcag
gagccatttcaggtgaaagtagcttcagaagcacttttaataatggatctgcatgcccac
gtgtctatggcagaggtgattgggcttttaggaggaagatactcagaagctgataaggtc
cttgaagtctgtgcagcagagccgtgtaacagtctgagtacaggacttcagtgtgagatg
gaccctgtctcacagacacaggcctcagaaaccttggctctcagaggctgcagtgttatt
gggtggtaccattctcatcctgcgtttgatcctaatccgtctttacgcgatattgacaca
caagccaaataccagagttatttctccagaggaggagcaaagttcattggaatgattgtt
agtccatataatcgaagtaatcctttaccatattcccagattacctgcttggttataagt
gaagaacttagccctgatggtacctatcgtttaccttacaaatttgaagtacaacagatg
ttagaagaacctcagtgggaattagtgtttgagaagacaagatggataatcgaaaaatac
aggctctctcatagcagcgtccccatggatagaatatttcgccgtgattctgacctaact
tgtctgcagaaacttttggagtgtctaaggaaaacactaagcaaagtagccaattgtttc
atcgctgaggaattcttgactcaagttgaaaatttgttcctttccaattacaaaagcaag
gaagaaaatggactggcagaagaaaacagtgcaaaggaattgttcatgtaa
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