Rattus norvegicus (rat): 298521
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Entry
298521 CDS
T01003
Symbol
Grik3
Name
(RefSeq) glutamate receptor ionotropic, kainate 3 isoform 1 precursor
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04080
Neuroactive ligand-receptor interaction
rno04082
Neuroactive ligand signaling
rno04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
298521 (Grik3)
04082 Neuroactive ligand signaling
298521 (Grik3)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
298521 (Grik3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
298521 (Grik3)
Ion channels [BR:
rno04040
]
Ligand-gated channels
Glutamate (ionotropic)
298521 (Grik3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
298521
NCBI-ProteinID:
NP_001106187
RGD:
71027
Ensembl:
ENSRNOG00000008992
UniProt:
P42264
A6IS78
Structure
PDB
PDBj
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All DBs
Position
5:143052442..143268873
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AA seq
919 aa
AA seq
DB search
MTAPWRRLRSLVWEYWAGFLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAF
RFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNA
VQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQSLKWRSATVVYD
DSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQ
ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWS
MERLQAAPRAESGLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGG
RFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVA
KGRGPNVTDSLTNRSLIVTTLLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFS
YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV
SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG
SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF
LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVK
NNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKIT
IAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAV
GEFIYKLRKTAEREQRSFCSTVADEIRFSLTCQRRLKHKPQPPMMVKTDAVINMHTFNDR
RLPGKDSMSCSTSLAPVFP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctccctggcggcgcctccggagtctggtttgggaatactgggccgggttcctc
gtgtgcgccttctggatcccagactcgcgcgggatgccccacgtcatccggatcggcgga
atctttgagtacgcggacggccccaacgcccaggtcatgaacgctgaggagcacgccttt
cggttttctgccaatatcatcaacaggaacagaactctgctgcccaacacgaccctgact
tacgacattcagaggattcacttccatgacagttttgaggccaccaagaaggcctgtgac
cagttggcgctcggtgtggtagccatctttgggccatcccagggctcctgcaccaatgcc
gtccagtccatctgcaatgccttggaggttcctcacatccaactgcgctggaagcaccac
cccctggacaacaaggacaccttctacgtgaacctctaccccgactacgcctctctcagc
cacgccatcctcgacttggtccagtccctcaagtggcggtcagccaccgtagtctatgat
gacagtacaggtctcatccggctgcaggagctcatcatggctccatctaggtacaacatc
cgcctgaagattcgccagctccccatcgactccgatgactcacgccccttgctcaaagag
atgaagcggggccgggagttccgtatcatctttgactgcagtcacaccatggcagcccag
atcctcaagcaggccatggccatgggcatgatgacggaatactaccacttcatcttcacc
actctggatctctatgcgctagacctggaaccctaccgctactcgggagtgaacctgact
gggttccgcatactcaacgtggacaacccccatgtctcagccattgtggagaagtggtcc
atggagcggctacaggcagctccccgggcagagtcaggcctgctggatggagtgatgatg
accgatgcagccctgctctacgatgcggtccacattgtgtctgtgtgctaccagcgagcg
ccgcagatgactgtgaactccctacagtgccatcggcacaaggcctggcgcttcggtggc
cgcttcatgaacttcatcaaggaggctcaatgggaaggattaactggacggattgttttc
aacaaaactagtggcttgcggactgattttgatctggacatcatcagcctcaaggaagat
ggcctcgagaaggtcggggtgtggagtccagctgacggtctcaatatcactgaggttgcc
aaaggccgaggtcctaatgtcaccgactctctgaccaacaggtcactcatcgtcaccact
ctgctggaggagccttttgtcatgttccgcaagtctgataggaccctttacggcaatgac
cggttcgagggctactgcatcgacttgctcaaggagctggcgcacatcctgggcttctcc
tacgagatccggctggtggaagacggcaagtacggggcacaggacgacaagggccagtgg
aacggcatggtcaaggaactcattgaccacaaagcagatctggctgtggctcccctgacc
atcacccatgtccgagagaaggccattgacttctctaagccttttatgaccctcggagtg
agcatcttatatcgaaaacccaatggcaccaaccccagtgtcttctccttcctcaacccc
ctgtccccagacatctggatgtacgtgctactcgcctacctgggtgtcagctgtgtcctc
ttcgtcattgccagattcagcccttatgaatggtatgatgcccacccctgcaaccccggc
tctgaggtggtggagaataacttcacgctgctcaacagcttctggtttggaatgggctcc
ctgatgcaacaaggatctgaactgatgcccaaagctctgtctacccgcatcattggcggc
atctggtggttcttcacccttattatcatctcctcctacacggccaacctggctgccttc
ctgaccgtggagcgcatggagtcacccatcgactctgccgatgacctggccaagcagacc
aaaatagagtacggtgctgtcaaggatggggccaccatgaccttcttcaagaaatccaag
atctccacctttgagaagatgtgggccttcatgagcagcaagccctcggctctggtgaag
aacaatgaggagggcatccagcggacactcacagctgactacgctctgctcatggagtcc
acgaccatagagtacatcacacaaaggaactgcaatctcacccagatcggcggcctcatc
gattccaagggctacggcatcggcacgcccatgggctccccctacagggacaaaatcacc
atcgccattctgcagctgcaggaggaggacaagctgcacatcatgaaggagaagtggtgg
cgaggcagcgggtgccccgaggaggagaacaaggaggccagcgcactgggcatccagaag
attggcggcatcttcatcgtcctggctgccggcttagtcctgtccgtgttggtggcagtg
ggcgagtttatatacaaactccgcaagacagcggaacgggagcagcgctctttctgcagc
acagtggccgacgagatccgcttctccctcacctgccagcggcgtctcaagcacaagcca
cagcctcctatgatggtcaagacagatgcggttatcaacatgcacacctttaatgaccga
aggcttccaggcaaggacagcatgagctgcagcacctcgctagcccctgtcttcccttag
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