Rattus norvegicus (rat): 298652
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Entry
298652 CDS
T01003
Symbol
Ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04120
Ubiquitin mediated proteolysis
rno04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
298652 (Ube4b)
04120 Ubiquitin mediated proteolysis
298652 (Ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
298652 (Ube4b)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
298652 (Ube4b)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
U-box type E3
298652 (Ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
298652
NCBI-ProteinID:
NP_001258127
RGD:
1304738
Ensembl:
ENSRNOG00000014986
UniProt:
F1M8V2
LinkDB
All DBs
Position
5:complement(165049897..165153572)
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AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASVPGPSQSLGLNVHNT
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIATAARSPD
RNLMLNTGSSSGTSPMFCSLGSFSASSLSSLGASGGASTWDSYSDHFTIETCKETDMLNY
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV
PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLARAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVE
KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAIVNANM
KKAQMQADDRLVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRINA
TMEDVNEWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLMLRVLDPAYPDITLPLNSEVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNQEQWDQLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
FNRQMLTESMLEPVPELKEQIQAWMREKQSSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcgacggaggcgcctggcacgacttgctggtgga
cagacctcccagccgaccaccccgcttacatctccccagagggagaaccctccaggacct
ccaatagctgcatcagtcccaggcccctcccagagccttggtctcaatgtccacaacacg
accccagctacctcccccataggtgcagcaggagttgcccatcggagccagagcagtgaa
ggcgtcagttctcttagcagctcaccttccaacagccttgagacgcaatctcagtccctc
tcacgttcccagagcatggatatcgatggtgtctcctgtgagaagagcatgtcccaggtg
gatgtggattctggaatcgagaatatggaggtggacgagaacgaccgaagagaaaaacgg
agcctgagtgacaaggagccttcttcaggtcctgaagtgtctgaagagcaggccttacag
ctggtctgtaagatcttccgtgtctcctggaaggaccgcgacagagatgtcatcttcctt
tcttctctctctgcgcagtttaaacagaacccaaaagaagtgttctctgattttaaggat
ctgattggccagattttaatggaagtgctgatgatgtccactcagacacgagatgaaaat
ccgtttgccagtctgacggccacatcccagcccatcgccacggcagctcggtcaccagac
agaaacctcatgctgaacacaggctccagttcggggacaagtcccatgttctgcagcttg
ggttccttcagcgccagctcactctccagtttgggagcctctggtggagcaagtacctgg
gattcttacagtgaccatttcaccattgaaacctgcaaagagacggacatgctgaactac
ctcatcgagtgctttgaccgagttggaatagaggaaaaaaaagcaccaaagatgtgcagc
cagccagcagtcagccagcttctgagcaacatccgctcgcagtgcatctcccacaccgcg
ctagtgctacaagggtccctcacacagcccaggtccttgcaacagccatccttcctcgtg
ccgtacatgctctgcaggaatctcccgtacggcttcattcaagagctggtgaggaccact
caccaggatgaagaggtgttcaagcagatctttatccccattttacaaggcctggcgcgt
gctgccaaagagtgctccttggatagcgactactttaagtaccccctcatggcactgggt
gaactctgtgaaaccaagttcgggaagacacaccctatgtgcaatttggtcgcctcctta
cccctgtggttgccgaagtccttaagccctggttctgggcgggagctgcagagactctcc
tacttaggggccttctttagcttctctgtcttcgcagaggacgatgcaaaggtggttgag
aaatacttctcagggcctgccattaccctggagaacacccgtgtggtcagccagtcacta
cagcattacctggagctgggacggcaagagcttttcaagattctgcatagtattttgtta
aacggcgaaactcgtgaagcagcactcagttacatggcagccattgtcaatgccaatatg
aagaaagcgcagatgcaggcagatgatcggttggtgtctacagacgggttcatgctgaat
ctcctttgggtcctgcagcagctaagtacaaaaatcaagttagaaacggtcgaccccact
tacatattccacccgagatgtcggatcactctgccaaacgatgagacacggataaatgca
acgatggaggatgtgaacgagtggctgacagagctctatggagatcagcctccattttct
gagccaaaattccctacagaatgcttctttctcaccctgcacgctcaccatctctctatc
ctgcctagttgtcgtcgctacattcgccggctccgagccatccgtgagctcaatagaacc
gtggaagatttgaaaaataatgaaagccagtggaaagattccccactggccaccagacac
cgcgaaatgctgaagcgctgtaaaactcagcttaagaaactggtacggtgcaaggcctgt
gctgacgctggcttacttgacgagagcttcctaagaagatgtctgaatttttatggcctt
ctcattcagctgatgctgcgcgtcctggaccctgcatatcctgacataacactgccttta
aattcagaagtccccaaggtatttgcagcattgcctgagttttatgtagaagatgttgct
gaatttttattttttattgtacaatactctcctcaggtgctttatgagccctgcactcag
gacattgtgatgttcctcgttgtgatgctgtgcaaccagaactacatccgaaacccttac
ctagtggccaagctcgtggaggtcatgtttatgaccaacccctctgttcagccgagaact
cagaagttttttgagatgattgagaaccatcctctctctaccaaattgctggtaccgtcc
ctcatgaagttctatacagacgtcgagcatactggagccaccagcgagttctatgacaag
ttcacaattcgctatcacatcagcactatttttaaaagcctttggcaaaacatagctcac
catggcaccttcatggaggagttcaattctggaaagcagttcgttcggtatatcaacatg
ctgataaatgacacgacctttttactggacgaaagtctggagtctctgaagcggatccat
gaagtgcaagaggagatgaagaaccaagagcagtgggaccagctgccccgggatcagcag
caggcccggcagtctcagcttgctcaggacgagcgtgtttcccgttcctatctcgccctg
gcgactgaaaccgtggacatgttccatctcctcaccaagcaagtccagaagccgttcctg
aggccagaacttggtccccggttagcagccatgctgaactttaacctgcagcagctctgc
gggcccaagtgccgggacctcaaagtggaaaacccagagaagtacggttttgagccaaag
aagctgttggaccaactgacggatatctacttacagctggactgtgctcgctttgctaaa
gccatcgctgatgaccagcgatcctacagcaaggaactgttcgaagaagtcatttcaaag
atgcggaaggcaggaatcaaatccaccatcgcaatagaaaagtttaagcttcttgcagag
aaagtggaggaaatcgtggcaaagaatgctcgggcggaaatagactacagtgacgccccg
gacgagttcagagaccctctgatggacaccctgatgactgatcccgtgagactgccctct
gggaccatcatggaccgttctatcatcctgcggcatctgctcaactcccccaccgacccc
ttcaaccgccagatgctgactgagagcatgctggagccagtgccagagctaaaggagcag
attcaggcctggatgagagagaagcagagcagtgaccactaa
DBGET
integrated database retrieval system
