Rattus norvegicus (rat): 298884
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Entry
298884 CDS
T01003
Symbol
Gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rno03400
]
298884 (Gen1)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
298884 (Gen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
298884
NCBI-ProteinID:
NP_001100187
RGD:
1559792
Ensembl:
ENSRNOG00000004667
UniProt:
A6HAP4
A0ABK0LR08
D3ZVS5
LinkDB
All DBs
Position
6:complement(39666675..39697480)
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AA seq
908 aa
AA seq
DB search
MGVNDLWQILEPVKQHIHLQDLCGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SYLTQMNVKLVFVMEGEPPKLKADVMNKRTQTRYGPSGKSRSQKTGRSHFKSVLRECLEM
LECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTVSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLQILKGQSLLQRFNQ
WTEEPGYSVPQSAAKKVVHCSVCSHPGSPKDHERNGCTLCKSDRYCEPHDYEYLCPCEWH
QTDHNRQLNEIENNIKKKACSCEGFPFHEVIQEFLSNKNKLLKPIRYQRPDLLLFQRFTV
QKMEWPSHYACEKLLVLLTRYDMIERKLGRKTSNQLQPIRIVKPRIRNGVCCLEIEWEKP
EHYSVEDTQPGGLDLLTIEEASLFEAAYPEVVAIYQKQQSETKGKKQKNIKIKPKGSHLP
ESDDVISSQSLITLEPISKAFPKQNPKFDLEISPDPILAQESTSPSLSSFVSPENALGLN
LQEQLMPSPRTLAVKQTKDVSNFLVSECSQPSSSSHNISVITDLHLSTIDWAGTSFSNSP
AVQRNTFSQDLQSEPESSAILPAFEQLSYESEQCTLSNKVSNRGLQKSGPEEHLLSSITG
LHLHDLPLKERIHIKSSCPQYNVGADADLESLPLTMNHSCIAYSSSGGSSHFSKDLTGVY
LQKELRNSKVLDSHFLQENFRVNTSLPYSFNDEAVKTSSLQVGLPTAAVPHNPKVDVKTK
NLVKKSSVCLKRDSSDEENAAVSWKAKYTAPKLKHSSHNHSLVHDRDSTHNKHRNPKDES
NETKLCTESFKIAEDEENKFSDPARNPQSFLQCHNKDEDSADCWESPLPLRQRLKLRFQN
TQSRLYNT
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgacctgtggcaaattttggagcctgtaaagcaacatatccacttgcag
gatctttgtgggaagaccattgccgttgatttgagtctctgggtatgcgaggcacagaca
gtgaagaaaatgattggaactgtcatgaagccccacctcaggaacctattttttcgtatt
tcatatttaactcaaatgaatgtaaaactggtgtttgtgatggaaggggagccaccaaag
ctgaaagctgatgtcatgaacaagaggactcagactcgatacgggccttctggaaaatcg
aggtctcagaaaacagggagatcgcattttaagtcagtcttacgagagtgccttgaaatg
ctagagtgcctaggaatgccctgggtccaggctgcgggggaagctgaggccatgtgtgct
taccttaatgccagcggccatgtggacggctgcctcaccaacgacggcgatgctttcctt
tatggagcccagactgtgtacaggaatttcaccatgaacacaaaggatccacatgttgac
tgttacacggtatcatctatcaagagtaagctaggcttggatcgagatgctctggtggga
ctggcggtacttcttggttgtgattaccttccgaagggagtgcctggagttggaaaagaa
caagcgttaaaacttttgcagattttgaaaggtcaaagtttgcttcagaggtttaaccag
tggactgaagaacctggctactctgttccacaatcagcagcaaaaaaagtggttcactgc
tcggtgtgttcccatccaggttctcctaaggatcatgaacgcaatgggtgcacactatgt
aaaagtgatagatactgtgaaccacatgattatgaatacctctgtccttgtgaatggcac
cagacagaccataataggcaactaaatgaaatagaaaacaatattaaaaagaaagcttgc
agttgcgaaggatttccattccatgaggtcatccaagaattcctttcgaataagaataaa
ctgttaaaaccgatcaggtaccaaagacctgatttattattgtttcagagatttactgtt
caaaaaatggagtggcccagtcactatgcgtgtgaaaaattgttggtgcttttgacccgc
tatgacatgatagaaagaaaacttggtagaaagacttccaatcaactacagccaattaga
attgttaaacctcgaatcagaaatggagtctgttgtcttgaaatagaatgggaaaagcct
gaacattattcggtagaagatacacaacctggaggactggatctccttacaatcgaagaa
gcatcactgtttgaagcagcctatcctgaagttgtagctatctaccagaaacaacagtca
gaaactaaagggaagaaacagaaaaatataaaaattaagcccaaaggaagccatctacca
gaatcagatgatgtgatcagttcccagtcacttattactttagaacctatatcaaaagcc
ttccccaagcagaatcccaaatttgatttggaaatttctccagatcctattttagcacag
gagtctacttctccctcattgagtagttttgtttcccctgaaaatgctcttggtttgaat
ttgcaagaacagttaatgccttctccaagaactttggctgtaaagcaaactaaagatgtc
agtaattttctagtttcagagtgtagtcagcccagttcttcatcccataatatttctgtg
attactgatctacacttgagtaccattgactgggcaggtacttcttttagtaattctcca
gcagttcaaagaaacactttctctcaagatttacaatcagaacctgaatcatcagccatc
cttcctgcctttgaacagttgtcatatgaatcagaacaatgtaccttaagcaacaaagtg
tccaatagaggtcttcagaagagtggtcctgaagagcatctcctttccagcatcactggt
ttacatcttcacgatttgcctctaaaggaaagaatacatataaaatcttcatgccctcag
tataatgtaggagcagatgctgacctggaaagtttacccctaacaatgaatcactcttgc
attgcttacagtagctctggtggttcatcccatttttcgaaggatcttacaggggtatat
cttcagaaagagctcagaaactctaaagttctagacagccacttccttcaagaaaacttc
agggtgaatacttccttaccttattctttcaatgacgaagcagtaaagacttccagtctt
caagttgggctgccaactgctgctgtacctcataatccaaaagttgatgtgaaaactaag
aaccttgtcaagaagagtagtgtttgcctcaagagagattcctcagatgaagagaatgct
gcagtgtcctggaaagctaagtatactgctcctaaattgaaacacagctctcataatcat
agcctagtccatgacagagacagtactcacaacaaacacagaaatccgaaagatgaatct
aacgaaaccaaactgtgtactgagtcttttaaaatagctgaagatgaagaaaacaagttc
tcagatccagcaagaaatccccagagttttctacaatgtcataacaaggatgaggactct
gctgactgctgggaaagtcctctccctttacgccagaggttaaagctcaggttccagaac
actcaaagtagactttataatacttaa
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