Rattus norvegicus (rat): 299016
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Entry
299016 CDS
T01003
Symbol
Npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
299016 (Npas3)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
299016 (Npas3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
299016
NCBI-ProteinID:
NP_001414225
RGD:
1307181
Ensembl:
ENSRNOG00000068162
LinkDB
All DBs
Position
6:76438064..77263185
Genome browser
AA seq
951 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAAGVPAGAGMGRAGAAANGTPQNVQGITSYQQRITAQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGAQRRRSPSALAIEVF
EAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEM
AEQLGMKLPPGRGLLSQGTTEDAASSASSSSQSETPEPVETTSPGLLTTDNTLERSFFIR
MKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEV
RIDCHMFVTRVNMDLNIIYCENRITDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLL
NKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIA
QLPHLPEKASESSETSDSESDSKDTSEDNENSKSDEKGNQSENSEDPEPDRKKSGSACDN
DMNCNDDGHSSSNPDSRDSDDSFEHSDFEHPKAAEDGFGALGSMQIKVERYVESEADLRL
QPCESLTSDSAKDSDSATEAGAQASSKHQKRKRRRKRQKGGSTSRRRLSSASSPGLDAGL
VEPPRLLSSPHSASVLKIKTEIAEPINFDNDSSIWNYPPNREISRNESPYSMTKPPTSEH
FPSPQGQGGSSGGGGALHVTIPDSVLTPPGADGTAGRKTQFSGTAPVASDPLSPPLSASP
RDKHPGGGAGSGGSGPGTSNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQR
VYTTGTIRYAPAEVTLAMQGNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMS
GPFGSAVSAASLTQMPGGNVFTTAEGLFSTLPFPVYSNGIHAAQTLERKED
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatctttccggatttcagcgtgcaggtgacggccgcggcggccggcggggca
gccgctggggtaccggccggtgcgggcatggggagggccggcgccgcggccaacggcacc
ccgcagaacgtccagggcatcacctcctaccagcagcgaataactgcccagcatcctctg
cccaaccaatcagaatgtaggaaaatctacagatatgacggaatctactgtgaatctacc
taccagaatttacaagcactgagaaaggagaaatccagagatgctgctcgctcccgccgg
ggaaaagaaaactttgagttctatgaattggccaagctgttgcctcttcctgccgccatc
accagccagctcgacaaggcgtccatcattcgacttacaattagttatctcaagatgagg
gactttgccaaccaaggggaccctccatggaatctgaggatggaaggccctccaccaaac
acctctgtaaaaggtgcacaacgaaggcggagcccgagtgcactggccattgaagtattt
gaagcacatttgggaagccacattttgcagtccctggatggcttcgtatttgcactaaat
caagaaggaaaatttttgtacatttctgaaaccgtctctatctacctaggcctctcacaa
gtggagctgacaggcagcagcgtctttgactatgtccaccctggggaccacgtggagatg
gcagagcagctgggcatgaagctcccgcctgggcggggcctcctctcgcagggcaccaca
gaggacgcggccagttcggcatcttcctcctctcagtcagagacccctgagccagtggag
acaaccagccccggtctgctaactactgacaacacccttgaacggtcctttttcatccga
atgaaatctactctgaccaaacgcggagtgcacatcaagtcgtcgggatataaggtgatc
cacataacaggccggcttcgcctcagagtgtcgctgtcccacgggaggaccgtccccagc
caaatcatgggtctcgtggttgtggctcatgccttgcctccccctacgatcaatgaagtc
agaattgactgccatatgttcgtcactcgagtaaacatggacctcaatatcatttactgt
gaaaataggattactgactacatggatctgactcctgtagacatcgtagggaaaagatgc
taccacttcatccatgccgaagacgtggaaggcatcaggcacagtcacctggacttgctg
aataagggtcagtgtgtgaccaagtactatcgctggatgcagaagaatggaggttacatc
tggatacagtctagcgccaccatagccattaatgcgaagaacgcgaatgagaagaacatc
atctgggtgaattatcttctcagcaatccagagtacaaggacacacccatggacattgcg
caactcccacatttgccagagaaagcttcagaatcctcagagacatccgactcagagtca
gactctaaagacacctcagaggacaacgagaactccaagtccgacgagaagggcaatcag
tccgaaaacagcgaagatccagagcctgaccgcaagaagtcaggcagcgcgtgcgacaac
gacatgaactgcaacgacgacggtcacagctccagcaacccggacagccgtgacagcgac
gacagcttcgagcactcggactttgaacaccccaaggcggccgaggacggcttcggcgcg
ctgggctccatgcagatcaaagtggagcgctacgtggagagcgaggcagatctgcggctg
cagccctgcgagtccctcacgtcggacagcgccaaggactcagacagcgcgacagaggcg
ggcgcgcaggcgtccagcaagcaccagaagcgcaagcggcggcggaaacggcagaagggc
ggcagcaccagtcgccggcgcctgtccagcgcgtccagcccaggcctggacgccggtctt
gtggagcctccgcggctgctgtcttcgccgcacagcgcttcggtgctcaagatcaagaca
gagatcgccgaacccatcaacttcgacaacgacagcagcatctggaactacccacccaac
cgggagatctccaggaacgagtccccatacagcatgaccaagccccccacctccgagcac
ttcccatccccccagggccagggaggcagcagcggaggcgggggagcgctacacgtgacc
atccccgactcggtcctcaccccaccgggcgctgatggcactgctggccgcaagactcag
ttcagcggaacagccccggtggcctctgatccactgtcgcccccgctctcggcgtccccg
cgggacaagcaccctggaggcggggcggggagtggtgggagtggccctggtacgtccaac
tccttgctgtacactggggacctggaggctctgcagaggttgcaagcgggcaatgtcgtg
cttccgctggtacaccgggtgaccgggaccctggcggccaccagcacagccgcacagagg
gtctacaccacaggcaccatccgctacgcaccggctgaggtgaccctggccatgcagggc
aacctgctacccaatgcgcatgctgttaacttcgtggacgttaacagcccaggcttcggc
ctcgaccccaagacgcccatggagatgctctaccaccacgtgcaccgactcaacatgtca
ggaccatttggcagcgccgtgagcgcggccagcctcacacagatgccaggtggcaacgtg
ttcaccacggctgagggactcttctccacgctgcccttcccggtctacagcaacggaatc
cacgcggcacagactctggagcgcaaggaggactga
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