Rattus norvegicus (rat): 299607
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Entry
299607 CDS
T01003
Symbol
Med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
299607 (Med16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
299607 (Med16)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
299607 (Med16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
299607
NCBI-ProteinID:
NP_001100238
RGD:
1308001
Ensembl:
ENSRNOG00000011315
UniProt:
A6K8V2
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Position
7:10449273..10461797
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AA seq
865 aa
AA seq
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MAAPDPGRWGECGPRPPGRLGARGGQEPGTVLGAVGMMDLAYVCEWEKWAKSTYCPSLPL
ACAWSCRNLIAFTTDLRNDDQDLTHMIHILDTEHPWEVHSVSSGHSEAITCLEWDQSGSR
LLSADADGQIKCWSMADHLANSWESSVGSQVEGDPIVALSWLHNGVKLALHVEKSGASSF
GEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVAL
ADIAFTGGGNIVVAAADGSSASPVKFYKVCVSVVSEKCRIDTEILPSLFMRCTTDPNRKD
RFPAITHLKFLARDMSEQVLLCASSQTSSLVECWSLRKEGLPVNNIFQQISPVVGDKQPM
ILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFQDGSVHMVH
RLSLQTMAVFYSSAPRSLDEPALKRPRTTGPAVHFKAMQLSWTSLALVGIDNHGKLSMLR
ISPSLGHALEPKLALQHLLFLLEYCMVTGYDWWDILLHVQPGMVQSLVERLHEEYTRQKP
ALQQVLSTRILAMKASLCKLSPCTVARVCDYHTKLFLMAITSTLKSLLRPHFLNTPDKSP
GDRLAEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLVSLPNQG
SALRPGHSFLRDGASLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKL
WICCRDEGPASEPDEGLVDECCLLPSQLLVPSLDWLPASDGLVSRLQPKQPLRLRFGRAP
TLPSSTSILQLDGLTRAPGQPKIDHLRRLHLGAYPTEECKACTRCGCVTMLKSPNKTTAV
KQWEQRWIKNCLCGGLWRRVPLSCS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggatcccgggcgttggggcgagtgtggaccgcggccgcccggtcggctg
ggcgcccggggcggacaggagccagggacggtgctgggtgcggtgggtatgatggaccta
gcctatgtgtgcgaatgggagaagtgggccaagagcacgtactgcccgtcgctgcccctg
gcctgcgcctggtcctgcaggaacctcattgccttcaccacagacctacgcaatgatgac
caggacctcacacacatgattcatatccttgacacagaacatccctgggaagtgcactct
gtcagctctggccacagtgaggccatcacctgcctggaatgggaccagtcagggtcccgg
ctcctgtctgccgatgctgacgggcagatcaaatgttggagcatggctgaccacctggcc
aacagctgggagagctccgtgggcagccaggtggaaggggaccccatcgtggctctgtcc
tggctgcataacggggtgaaactggcactgcacgtagagaagtctggtgcctccagcttc
ggagaaaagttctcccgggtgaaattctccccgtctctcacgctgtttggtggcaagcca
atggagggttggattgcggtgacagtcagcggcctggtcactgtgtccctcctgaagccc
agtgggcaggtgctgacgtccacggagagcctgtgccggctgcgtggccgagtggcactg
gccgacatcgccttcacaggcggtgggaacatcgttgtggccgctgcggacggcagcagt
gcatcgcccgtgaagttctacaaggtgtgcgtgagcgtggtgagcgagaagtgccgcatc
gacacggagatcctgccctcgctgtttatgcgctgcaccaccgaccccaaccgcaaggac
cggttccccgccatcacacacctcaagttcctggcgagagacatgtctgagcaggtgctc
ctgtgtgcatccagccagaccagcagcctagtggagtgctggtcccttcggaaagagggc
cttcctgtgaacaacatcttccagcagatctcgcctgtggttggtgacaaacagcccatg
atcctcaagtggcggatcctgtcagccaccaatgacctggaccgtgtatcagctgtggca
ctgccgaaactgcccatctcactcaccaacactgacctcaaggtggccagtgacacccag
ttctatccaggccttggcttggcgctggccttccaggacggcagcgtgcacatggtgcat
cggctatcccttcagaccatggctgtattctacagctcggccccacgctctctggatgag
cctgccctgaagcgcccacgcaccacaggccccgctgtacacttcaaggccatgcagctg
tcctggacttcgctggccctggtgggcatcgataaccacgggaagctcagcatgctgcgc
atctctccgtccctgggccacgcgctggagcccaagctggccctgcagcatctgctgttc
ctgctggagtactgcatggtgactggctacgactggtgggacatcctgctccacgtgcag
ccaggcatggtgcagagcctggtggagcggctgcacgaggagtacacacgccagaagcct
gccctgcaacaggtcctctccacccggatcttagccatgaaggcctcgctgtgcaagctg
tcaccctgcaccgtggctcgtgtgtgtgactaccacaccaagctgttcctcatggctatc
acgtccaccctcaagtcgctgctgcgcccacacttcctcaacacccctgacaagagccct
ggagaccgcctggccgagatctgtgccaagatcaccgatgttgacatcgacaaagtcatg
atcaacctgaagacagaagagtttgttctagacatgaacactttgcaggcgctgcagcag
ttgctacaatgggtgggagacttcgtgctctacctcctggtcagcctgcccaaccagggc
tccgcactgaggccgggccacagcttcctccgggatggtgcctcactgggtatgctgcgg
gaattgatggttgtcatccgaatatggggcctactgaagcccagttgcctgcccgtctat
acagccacctcagacacccaggacagcatgtccctgctcttccggctgctcaccaagctg
tggatttgctgccgtgacgaaggcccagccagtgagcccgatgagggcttggtggacgaa
tgctgcctgctgcccagccagctgctggtccccagcctggactggcttcctgccagtgac
ggcctggtcagtcgcctgcagcccaaacagcccttgcgcctgcgcttcggcagggcaccc
accctgcccagcagcacctccatcctgcagctggacggcctcaccagggcccctgggcag
cccaagatcgaccaccttcggaggctacacctgggtgcctaccccacggaggagtgcaaa
gcctgcaccaggtgtggctgtgtcaccatgctgaagtcacccaacaagacaactgctgtg
aaacagtgggaacagcggtggatcaagaattgcctgtgtggtgggctgtggcggagagtg
cctctcagctgttcctga
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