Rattus norvegicus (rat): 300050
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Entry
300050 CDS
T01003
Symbol
Bop1
Name
(RefSeq) ribosome biogenesis protein BOP1
KO
K14824
ribosome biogenesis protein ERB1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
300050 (Bop1)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
300050 (Bop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
300050
NCBI-ProteinID:
NP_001019421
RGD:
1310589
Ensembl:
ENSRNOG00000021773
UniProt:
Q562C2
LinkDB
All DBs
Position
7:complement(110052716..110076529)
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AA seq
731 aa
AA seq
DB search
MAGACGKHHMSPGSLPGKRRLEPDQEPQIQEPLLLSDPDSSLSDSEESVFSGLEDSGSDT
SDEDTEEVARAGCDKDNRTEKTSEEQEQAVPPCPRAEEAGALTRDEYEEDSSDEEDIRNT
VGNVPLAWYDDFPHVGYDLDGKRIYKPLRTRDELDQFLDKMDDPDFWRTVQDKMTGSDLR
LTDEQVALVHRLQRGQFGDSGFDPYEPAVDFFSGDIMIHPVTNRPADKRSFIPSLVEKEK
VSRLVHAIKMGWIKPRRPPDSTPSFYDLWAQEDPNAVLGRHKMHVPAPKLALPGHAESYN
PPPEYLPTEEERLAWMQQEPIERKLNFLPQKFPSLRTVPAYGRFIQERFERCLDLYLCPR
QRKMRVNVDPEDLIPKLPRPRDLQPFPVCQALVYRGHSDLVRCLSVSPGGQWLASGSDDG
TLRLWEVATARCMKTVRVGGVIRSIAWNPNPTICLVAAAMDDAVVLLNPALGDRLLVGST
DQLLETFTPPEEPTLQPAHWLEVSEEERQRGLRLRICHSKPVTQVTWHGRGDYLAVVLSS
QGHTQVLIHQLSRRRSQSPFRRSHGQVQCVAFHPTRPFLLVASQRSIRIYHLLRQELTKK
LMPNCKWVSSMAVHPAGDNIICGSYDSKLVWFDLDLSTKPYKVLRHHKKALRAVAFHPRY
PLFASGSDDGSVIVCHGMVYNDLLQNPLLVPVKVLKGHSLTRDLGVLDVAFHPTQPWVFS
SGADGTIRLFS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggcgtgtggtaagcaccacatgtcaccgggatcgctgccagggaaacggcgt
ttggaacctgatcaggagccacagatacaagagcctcttctcctcagcgaccctgactcc
agtctctctgacagcgaggagagtgtgttttcaggccttgaagattctggcagtgacacg
agtgacgaggacactgaagaagtggccagagctggttgtgacaaagacaatagaacagag
aagacctctgaggagcaggaacaggctgtgcccccttgcccaagggcagaggaagcaggt
gctctgaccagagatgagtatgaagaggacagctctgatgaggaggacattcggaacacc
gtgggcaatgtgcccctggcgtggtatgacgatttcccacatgtgggctatgacctggac
ggcaaacgtatctataagcccctgcggacacgagatgagctggaccagtttctggacaaa
atggatgacccagatttctggcgcactgtgcaagacaagatgacagggagtgatcttcgg
ctgactgatgagcaggttgccctggtacatcggcttcagagaggccagtttggagattca
ggctttgacccctatgagccagctgtggatttcttcagtggtgacatcatgatccacccc
gtgaccaaccgcccagctgacaaacgtagtttcatcccgtccctagttgagaaggagaag
gtgtctcgattggtgcatgccatcaagatgggttggatcaagcctcgacggccccccgac
tccactcctagcttctatgacctgtgggcccaggaggatccaaatgctgtgttggggcgc
cacaagatgcacgtgcctgcacccaagctggccctgcccggccatgcggagtcttacaac
ccacctcccgagtacctgcccactgaggaggagcgcttggcatggatgcagcaggagccc
attgagaggaagcttaacttcttaccacagaagttccccagcctgaggacagtgcctgct
tatggccgcttcatccaggagcgttttgaacgctgtcttgatttgtatctgtgcccacgg
cagcgcaagatgagggtgaatgtggatcccgaagacctcatccccaagctccctcggcca
agagaccttcagcctttccctgtgtgccaggcccttgtctacaggggccacagcgacctt
gtccgttgcctcagtgtctccccagggggccagtggctagcttcaggttcagacgacggc
acattgaggctttgggaggtggccactgcccgctgcatgaagacggtgcgtgttggaggt
gtgatacggagcattgcttggaaccccaatcccaccatatgcttagtagccgctgccatg
gatgatgccgtggtgctgctgaacccagccctgggggaccggctgctggtgggcagcaca
gaccagctgctggaaaccttcactccccctgaagagccaactttgcagcctgcccactgg
ctggaggtctcagaggaagaacgccagaggggccttcgactacgtatctgccacagtaaa
ccagtgacacaggtgacctggcatgggcgaggggactacctggctgtggtgctgtccagc
caagggcacactcaagtgctgatccaccagctgagcagaaggcgcagccagagcccattc
cgccgcagccacggacaggtgcagtgtgtggctttccatcccacgcggcccttcctgctt
gtggcctcccagcgcagcatccgcatttaccacctgctacgccaggagcttacgaagaag
ctgatgcctaactgcaagtgggtgtctagcatggctgtgcatccagcaggtgacaacatc
atctgtggcagctatgacagcaaactggtgtggtttgacctggatctttccaccaagcca
tacaaagtgctgaggcaccacaagaaggccttgcgggctgtggccttccacccccgatac
ccactctttgcatccggctcagacgacggcagcgttatcgtttgccatggcatggtgtac
aatgacctgctgcagaacccattgctggtgcccgtcaaggtgcttaagggacacagcctg
acccgagatctgggtgtactggatgtggccttccaccccacacagccatgggtcttctcc
tccggggcagatggcaccattcgactcttcagctaa
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