Rattus norvegicus (rat): 300218
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Entry
300218 CDS
T01003
Symbol
Tuba1c
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04145
Phagosome
rno04210
Apoptosis
rno04530
Tight junction
rno04540
Gap junction
rno04814
Motor proteins
rno05010
Alzheimer disease
rno05012
Parkinson disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05020
Prion disease
rno05022
Pathways of neurodegeneration - multiple diseases
rno05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
300218 (Tuba1c)
09143 Cell growth and death
04210 Apoptosis
300218 (Tuba1c)
09144 Cellular community - eukaryotes
04530 Tight junction
300218 (Tuba1c)
04540 Gap junction
300218 (Tuba1c)
09142 Cell motility
04814 Motor proteins
300218 (Tuba1c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
300218 (Tuba1c)
09164 Neurodegenerative disease
05010 Alzheimer disease
300218 (Tuba1c)
05012 Parkinson disease
300218 (Tuba1c)
05014 Amyotrophic lateral sclerosis
300218 (Tuba1c)
05016 Huntington disease
300218 (Tuba1c)
05020 Prion disease
300218 (Tuba1c)
05022 Pathways of neurodegeneration - multiple diseases
300218 (Tuba1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
300218 (Tuba1c)
03036 Chromosome and associated proteins [BR:
rno03036
]
300218 (Tuba1c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
300218 (Tuba1c)
04147 Exosome [BR:
rno04147
]
300218 (Tuba1c)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
300218 (Tuba1c)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
300218 (Tuba1c)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
300218 (Tuba1c)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
300218 (Tuba1c)
Exosomal proteins of other body fluids (saliva and urine)
300218 (Tuba1c)
Exosomal proteins of colorectal cancer cells
300218 (Tuba1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
300218
NCBI-ProteinID:
NP_001011995
RGD:
1307226
Ensembl:
ENSRNOG00000021438
UniProt:
Q6AYZ1
A6KCD2
LinkDB
All DBs
Position
7:131636974..132078589
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLARVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSAEGDDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccatccacgttggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacatggcatccagcctgatggccagatgccaagtgacaag
accattgggggaggagatgactccttcaacaccttcttcagtgagacaggagctggcaag
cacgtgccccgggcggtgttcgtagacctggaacccacagttattgatgaagttcgaact
ggcacctaccgccagctcttccacccagagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgtggccactacaccattggcaaggagatcattgaccttgtcttggac
agaattcgcaagctggctgaccagtgcacgggtctccagggcttcttggttttccacagc
tttggtgggggaactggctctgggttcacctccctgctgatggagaggctctctgtcgac
tacggaaagaagtccaagctggagttctccatttacccagccccccaggtttccactgct
gtggttgagccctacaattccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgtagaaacctcgacattgag
cgcccaacctacactaaccttaaccgccttattagccagattgtgtcttccatcactgct
tccctcagatttgatggggccctgaatgttgatctgacagaattccagaccaacctggtg
ccctaccctcgaatccacttccctctggccacttatgcccctgtcatctctgctgagaaa
gcctaccatgagcaacttacagtagcagagatcaccaatgcctgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcttgctgcctgctgtaccgt
ggtgatgtggtccccaaggatgtcaatgctgccattgccaccatcaagaccaagcgtacc
atccagtttgtggactggtgccccactggcttcaaggttggcattaattaccagcctccc
actgtggtacctggtggcgacctggccagggtgcagagagctgtgtgtatgctgagcaac
accacagccattgctgaggcctgggctcgcctggatcacaagtttgatctgatgtatgcc
aagcgtgcctttgtgcactggtatgtgggtgagggcatggaggagggggagttctctgag
gcccgtgaggatatggctgccctagagaaggattatgaggaggttggggcagatagtgct
gaaggagacgatgagggtgaagaatattaa
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integrated database retrieval system