Rattus norvegicus (rat): 300710
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Entry
300710 CDS
T01003
Symbol
Ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
300710 (Ddx10)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
300710 (Ddx10)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
90S particles
Helicases
300710 (Ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
300710
NCBI-ProteinID:
NP_001100290
RGD:
1308990
Ensembl:
ENSRNOG00000012500
UniProt:
D3ZBY5
A6J4I8
LinkDB
All DBs
Position
8:complement(62384876..62539585)
Genome browser
AA seq
874 aa
AA seq
DB search
MGKTVGSLGQGTRPDPVRSFNRWKKKHSHRQHQKKERRKQLKKPEWQVEREGISRLMQNY
EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT
LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
LKHEAERINNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQK
ISVLFSFLRSHLTKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNE
FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL
PSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKRLESFLAQDQDLKERAQRCFVSYIRSV
YLMKDKEVFDVNKLPITEYALSLGLAVAPRIRFLQKMEKQPNKELGKNQVTEAIQPRAPS
LTSDEVEEFRAYFSEKMSILHKSGKRLEETEHSLASGESEEQDEETEDEEMEDHVGQTRE
PPTDSVPRSEEAQKVKEVPVQFLDRDDDEEDGPDADFLTVKRRDVFGLDLKENEALSKKE
PSKSSVKKKLTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQIQKCATNDVEEEDDTG
GINLDKAKERLQEEDKFDKEEYRKKIKAKHRERRLKEREARREANKRQAKARDEEEAFLD
WSDEDDGGFDPSTLPDPDKHRSSEESESEDTKHKMSDTKKKQEMRKRNNTEVDDVRPRSR
HGKKAKWETLEPLDTGLSLAEDEELVLHLLKSQN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaacggttggttctctgggtcagggaacccgaccggacccggtgaggagcttc
aaccgctggaagaaaaaacacagccacaggcagcaccaaaagaaggaacggaggaagcag
cttaagaagccggaatggcaggtcgaacgtgagggtatcagccgcctcatgcaaaattac
gagaagataaatgtaaatgaaattacaagattttcagatttccctttatccaaaaaaacg
ttgaaaggtttgcaagaagcgcaataccgcttggtaacagagatacagaagcagaccata
gggttggctttgcaaggtaaagatgtgcttggagctgccaaaactgggtctggcaagact
ttggcttttctcgttccagtattggaagccttataccgcctgcagtggacttcaacagac
ggcctgggagttctgataatatcacctactcgagaactggcctatcagacatttgaggtt
ctacgcaaagtaggaaagaaccatgatttttcagctggtctcatcattggtgggaaggat
ctaaaacatgaagctgagaggatcaacaacataaatatactcgtttgcacaccaggtcga
cttcttcaacacatggatgaaacaatctgttttcatgccaccaatcttcagatgttagtt
cttgatgaggcagacagaatcttagatatgggctttgctgataccatgaatgctatcatt
gaaaatcttcccaagaaacgccagactttgctgttctcagctacacagaccaaatctgtg
aaggaccttgcgcgcttgagtttgaaagaccctgagtatgtctgggttcatgagaaagca
aaatatagcacccctgctacattggaacagaactatataatttgtgagctgcaccaaaaa
ataagtgtgctgttttcatttttgagaagccacctaacgaagaagagtattgtgtttttc
tccagttgcaaagaggtgcagtatctgtacagggtgttctgccggctgcgcccagggatc
tctatccttgctctccatggccggcagcagcagatgcgaagaatggaagtctacaatgaa
tttgtccgaaagagggctgcagtcctttttgctactgatattgcagccaggggattggat
tttccagctgtgaattgggtccttcagtttgattgtccagaggatgccaacacgtatatt
cacagagctggtagaactgccaggtacaaggaggacggagaagcgttattaattttactg
ccctccgaagaacaaggcatggtgcagcagcttctccagaagaaagttcctgtgaaggag
atcaaaatcaatccagaaaaacttatcgatgttcagaaaagattagaatcatttttagct
caagatcaagatttaaaagaaagagctcaaaggtgttttgtctcctacatacgttcagta
tatcttatgaaggataaagaagtatttgatgtgaacaagttacctattactgaatatgca
ctgtctcttggtcttgctgtggcaccacggataagatttcttcagaaaatggagaaacag
cccaacaaagaattgggaaagaatcaagtcactgaagcaattcagcccagggctccctcc
ctcaccagtgatgaagtagaagaatttcgagcttatttcagtgagaaaatgtccatcctt
cacaaaagtgggaaaagactagaagagacagaacacagcttggctagtggtgagagtgaa
gaacaggatgaagagacggaagatgaagaaatggaagatcatgtgggacaaacaagagag
cctcccactgactctgttcccaggagtgaggaggcacagaaggtcaaggaagttcctgtg
cagttcttagacagggatgatgatgaggaagatgggcctgatgctgacttcctcacagtg
aagcggcgtgatgtgtttgggttggatcttaaagagaatgaagcactgtcgaaaaaggaa
ccttctaaatccagtgtcaagaaaaaattaaccaaagttgcagaagcaaaaaaagtaatg
aagagaaattttaaagtgaacaagaaaataacatttacggatgaaggagagttggttcag
cagtggccacagattcagaaatgtgctacaaatgatgtggaggaagaagatgacactggt
ggcatcaacctagacaaagccaaagaaaggcttcaggaagaggacaaatttgacaaagaa
gaatataggaagaaaattaaggcaaagcatcgggaaagacgcttaaaagagagagaggcc
agaagagaagccaacaaaagacaagcaaaggccagagatgaagaggaagcctttctggac
tggagtgatgaagatgatggtggatttgatccaagcacacttccagatccagataagcac
agaagttctgaagaatcagagagtgaagatacaaaacacaagatgagtgacaccaagaag
aagcaggaaatgaggaagagaaacaacactgaagtcgatgatgtaagaccaagaagtcgt
catggaaagaaggccaagtgggaaacgttagaacctttggatacaggcctgtctttagca
gaggacgaagagctggtgttacatctcctcaaaagtcaaaactaa
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