Rattus norvegicus (rat): 300807
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Entry
300807 CDS
T01003
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04659
Th17 cell differentiation
rno04710
Circadian rhythm
rno05017
Spinocerebellar ataxia
rno05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
300807 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
300807 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
300807 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
300807 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
300807 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rno03310
]
300807 (Rora)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
300807 (Rora)
Nuclear receptors [BR:
rno03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
300807 (Rora)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
300807
NCBI-ProteinID:
XP_038938752
RGD:
1308419
Ensembl:
ENSRNOG00000027145
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All DBs
Position
8:78182710..78915730
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AA seq
522 aa
AA seq
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MESAPAAPDPAASEPGSSGSEAAAGSRETPLTQDAGRKSEAPGAGRRQSYASSSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIENYQNKREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSL
EVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIA
LFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALC
GRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggctcg
gaggcggccgccggctccagggagaccccgttgacccaggacgcgggccgcaagagcgag
gcaccgggcgcggggcgcaggcagagctatgcgagctccagccgaggtatctcagtcacg
aagaagacacacacatctcaaattgaaattattccatgcaagatctgtggagacaaatcg
tcaggaatccattatggtgtcattacgtgtgaaggctgcaagggctttttcaggagaagt
cagcagagcaatgccacctactcctgtcctcggcagaagaactgtttgatcgataggacc
agcagaaaccgctgccagcactgccggctgcagaagtgcctggctgtggggatgtctcga
gatgctgtcaagtttggccggatgtccaagaagcaaagagacagcctgtacgccgaggtg
cagaagcaccggatgcagcagcagcagcgagaccaccagcagcaacctggggaggctgag
ccgctgacgcccacctacaacatctcagccaatgggctgacggaactgcatgatgacctc
agcacctacatggacggccacacccccgagggcagcaaggccgactcagctgtcagcagc
ttctacctggacatccagccctccccagaccagtcgggactggacatcaatgggatcaaa
cccgaacccatatgtgactacacaccagcatctggcttcttcccctactgttccttcacc
aacggagagacttccccaaccgtgtccatggcggaactagaacaccttgcacagaacata
tccaaatcgcacctggaaacctgccaatacttgcgggaagagctccagcagataacgtgg
cagaccttcctgcaggaggagattgagaactaccagaacaagagagaggtgatgtggcag
ttgtgtgctatcaagattacagaagctatccagtatgtggtggagttcgccaaacgcatc
gacgggtttatggagctgtgtcaaaatgatcaaattgtgcttctaaaagcaggctctcta
gaggtggtgtttattaggatgtgccgtgcctttgactctcagaacaacaccgtgtacttt
gatgggaagtatgctagccccgatgtcttcaaatccttaggttgtgaagacttcattagc
tttgtgtttgaatttgggaagagtttgtgttctatgcatctgactgaagacgaaatcgca
ttgttttctgcatttgtactgatgtcagcagatcgctcctggcttcaggaaaaggtaaaa
atagaaaaactgcaacagaaaattcagctagcccttcaacatgtccttcagaagaaccac
cgagaagatggaattctaacaaagctaatatgcaaggtgtctacgttaagagccctatgc
ggacgacatacagaaaagctaatggcatttaaagcaatatacccagacattgtgcgactc
cattttcctccgttatacaaggaattgttcacttcagaatttgagccagcaatgcaaatc
gatgggtaa
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