Rattus norvegicus (rat): 301271
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Entry
301271 CDS
T01003
Symbol
Ptchd4
Name
(RefSeq) patched domain-containing protein 4 isoform X2
KO
K24682
patched domain-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
301271 (Ptchd4)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Other domain-containing proteins
Patched domain-containing proteins
301271 (Ptchd4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
301271
NCBI-ProteinID:
XP_008765136
RGD:
1563020
Ensembl:
ENSRNOG00000012708
UniProt:
A0A8I6AYQ0
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All DBs
Position
9:complement(25951395..26163296)
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AA seq
901 aa
AA seq
DB search
MRRPGAPASWIWWRMLRQVLRRGLQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNR
FQTESDLERLVAPSHSLAKIERSLASSLFPLDQSKSQLYSDLHTPGRYGRVILLSPPGDN
ILLQAEGILQTHRAVMEMKVNHKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQAAVS
NKTTARVQVRYPNTKLKDGRNSFIGHQLGGVVEVPNSKDQRVKSARAIQITYYLQTYGSA
TQDLIGEKWENEFCQLMRKLQDEHQDLQLYSLASFSLWRDFHKTSILTRSKVLVSLVLIL
TTATLSSSMKDCLRSKPFLGLLGVLTVCISIATAAGIFFITDGKYNSTLLGIPFFAMGHG
TKGVFELLSGWRRTKENLPFKDRVADAYSDVMVTYTMTSSLYFITFGMGASPFTNIEAVK
IFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDGKPVWFQTV
MSDGHQQTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGCLQI
SDGASIINLLASDSPSVSYAMVQQKYFSNYSPVIGFYVYEPLEYWNSSVQEDLQRLCSGF
TAVSWVEQYYQFLKASNISANNKTDFISVLQSSFLKKPEFQHFRNDIIFSRAGDENNIIA
SRLYLVARTSRDKQKEVIEVLDKLRPLSLSKSIRFIVFNPSFVFTDHNSLSVTVPVLIAG
FGVLLVLVLTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFA
IDHCAPLLYTFVLATEHTRTQCIKSSLQEHGTAILQNITSFLIGLVPLLFVPSNLTFTLF
KCLLLTGGCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDHVTT
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggccgggagcgcctgcgagctggatctggtggaggatgctgcggcaggtgctt
cgcagagggctccagtcattctgccacaggctgggcttatgcgtgagccggcacccggtc
tttttcctcaccgtgccggcagtcctgaccatcaccttcggcctcagcgcgctcaaccgc
ttccagaccgagagcgacctggagcgcctggttgctcccagccacagcctggccaagatc
gagcgcagcctagccagcagccttttccccctggaccagtccaaaagccagctctattcg
gacttacacacccctgggaggtatggcagggtgatcctcctctccccacccggggacaat
attttgctccaggctgaggggatcctgcagacccaccgagccgtgatggaaatgaaggtg
aaccacaagggctataattatactttttcccatctgtgtgtgttgagaaatcaggataag
aaatgcgtgctggatgatattatttcagtgctagaggatctcaggcaggctgccgtctcc
aataagacaacagccagggtgcaagtaaggtatcccaacactaaattaaaggatgggagg
aacagttttattggacaccagctgggcggggtagtggaagtgccaaacagcaaagaccag
cgggtcaagtcagccagagccattcaaatcacctactacctccagacctatggttctgcc
actcaagacctcataggggagaagtgggagaatgagttctgtcagcttatgaggaagctc
caggatgagcaccaagacctccaactgtactctctggcatcttttagcctgtggagagac
tttcataagaccagcatcctgaccagaagcaaggtcctggtgagcctcgtgctgatcctg
accacagccaccctgtccagctccatgaaggactgcttgcgcagtaagcccttcctgggc
ctcctgggggtgctcacggtatgcatttccatcgccactgcagccgggatcttcttcatc
actgatgggaagtacaactccaccctgctgggaatccctttcttcgccatgggtcatgga
actaaaggagtatttgagcttctgtctggatggcggagaaccaaagagaatttacccttc
aaagacagggtagcagacgcctattctgatgtgatggtcacctacaccatgaccagttcc
ctgtacttcatcacgtttggtatgggtgccagccccttcacaaacatagaggcagtgaag
atcttctgtcagaatatgtgtgtctctattctattgaactacttctacattttctctttc
tttggctcttgcctggtctttgctggacaacttgagcaaaatcgataccacagcatcttt
tgctgtaagatcccttctgcagaatacctggacggcaagcctgtgtggttccagacagta
atgagtgatgggcaccaacagacatcccatcatgagacaaacccctaccagcaccatttc
atccagcacttcctccgagaacattacaatgagtggattaccaatatctatgtgaagcca
tttgtggtcatcctgtatctcatttatgcctctttctccttcatggggtgcttgcagatc
agtgatggagccagcattatcaacctactagccagtgactcaccgagtgtgtcctatgcc
atggttcagcaaaaatatttcagcaactatagccctgtaataggattctacgtctatgaa
cccctggagtactggaacagcagcgtccaggaggatctgcagaggctctgtagtgggttc
actgcagtgtcctgggtggaacagtactaccagtttctaaaagcgagcaacatcagtgcc
aataacaagaccgacttcatcagtgtcctacaaagctcgtttttaaaaaagccagagttt
caacactttcggaatgatatcattttctccagggctggggatgaaaacaacatcatcgct
tctcgcttatatctggtggccaggactagcagggacaagcagaaggaagtcatcgaagtt
ctggacaagttgaggcccctgtctctctcaaagagtatccggttcatcgtgtttaaccct
tcctttgttttcacagaccataatagtctgtcagtcactgtgcctgttctgatcgcaggc
tttggggttctcctggtgttagtcctgactttcttcctagtgatccatcctctgggaaat
ttctggctaattcttagtgtcacctcaattgagctgggcgttctgggcttaatgacattg
tggaatgtcgacatggattgcatttctatcttgtgccttatctacactttaaattttgcc
attgaccactgtgcaccactgctttacacatttgtactagcgactgagcacaccagaaca
caatgtataaaaagctccctgcaagagcatgggacagccattttgcaaaacattacttct
tttcttattgggttggtccccctcctctttgtgccttcaaacctgaccttcacactgttc
aaatgcttgctgctgaccgggggttgcacgcttctgcactgttttgttatcttacctgtg
ttcctaaccttttttcctccttccaaaaagcaccacaagaaaaagaaacgtgccaaacga
aaggagagagaggaaattgaatgcatagaaatccaagagaacccagaccatgtcaccaca
gtctga
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