Rattus norvegicus (rat): 303008
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Entry
303008 CDS
T01003
Symbol
Rhbdf1
Name
(RefSeq) inactive rhomboid protein 1
KO
K27588
inactive rhomboid protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
303008 (Rhbdf1)
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Gene cluster
GFIT
Motif
Pfam:
iRhom1-2_N
Rhomboid
Motif
Other DBs
NCBI-GeneID:
303008
NCBI-ProteinID:
NP_001025205
RGD:
1305075
Ensembl:
ENSRNOG00000020594
UniProt:
Q499S9
A6HDB3
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All DBs
Position
10:15911282..15924214
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AA seq
856 aa
AA seq
DB search
MSEARRDSTSSLQRKKPPWLKLDIPAVVPPAAEEPSFLQPLRRQAFLRSVSMPAETARVP
SPHHEPRRLALQRQTSITQTIRRGTADWFGVSKDSDSTQKWQRKSIRHCSQRYGKLKPQV
IRELDLPSQDNVSLTSTETPPPLYVGPCQLGMQKIIDPLARGRAFRMADDTADGLSAPHT
PVTPGAASLCSFSSSRSGFNRLPRRRKRESVAKMSFRAAAALVKGRSIRDGTLRRGQRRS
FTPASFLEEDMVDFPDELDTSFFAREGVLHEELSTYPDEVFESPSEAALKDWEKAPDQAD
LTGGALDRSELERSHLMLPLERGWRKQKEGGTLAPQPKVRLRQEVVSAAGPRRGQRIAVP
VRKLFAREKRPYGLGMVGRLTNRTYRKRIDSYVKRQIEDMDDHRPFFTYWLTFVHSLVTI
LAVCIYGIAPVGFSQHETVDSVLRKRGVYENVKYVQQENFWIGPSSEALIHLGAKFSPCM
RQDPQVHNFILAAREREKHSACCVRNDRSGCVQTSKEECSSTLAVWVKWPVHPSAPDLAG
NKRQFGSVCHQDPRVCDEPSSEDPHEWPEDITKWPICTKNSAGNHTNHPHMDCVITGRPC
CIGTKGRCEITSREYCDFMKGYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLS
LFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGP
AGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISGFVSG
LFLSFAFLPYISFGKFDLYRKRCQIIIFQAVFLGLLAGLVVLFYFYPVRCEWCEFLTCIP
FTDKFCEKYELDAQLH
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcccggagagacagtactagcagtctgcaacgcaagaaacccccgtggctc
aagttggacatcccagctgtggtgcccccagcagcagaagagcccagcttcctgcagccc
ctgcggcgacaggctttcctgcggagtgtgagtatgccggctgagacagcccgtgtcccg
tcaccccaccatgagcctcggcggctggcgctgcagcgtcagacatccatcacgcagacc
atccgcagggggacagctgactggtttggagtgagcaaggacagtgacagcacccagaag
tggcagcgtaagagcatccgtcactgcagccagcgatatgggaagctaaagccacaggtc
atccgggagctggacctgcccagccaggacaatgtgtcgctgaccagcactgagacaccg
cctccactctatgtggggccatgccagctgggaatgcagaagatcatagaccctctggcc
cgaggccgggccttccgcatggccgatgacaccgccgatggcctgagtgccccccacact
cccgtcacaccaggtgctgcctccctctgttccttctccagctcccgctcaggtttcaac
cggctccctcggcgtcgcaaacgtgaatccgtggccaagatgagcttccgggccgctgca
gcgctggtgaagggtcggtctattagggatggcactttacgaaggggacagcgtcggagc
tttactcctgccagcttcctggaggaagacatggtggacttccctgatgagctggataca
tctttctttgcccgggaaggtgtcctccatgaggagctgtccacgtacccagatgaggtg
tttgagtccccatcagaagcagcgctcaaggactgggagaaagccccggatcaggcagac
cttacgggtggggccctggaccgcagcgagctcgagcgaagccacttgatgttacccctg
gaacgaggctggaggaagcagaaggaaggcggcacgctagccccgcagcccaaggtgcgg
cttcgccaggaggtggtcagtgcggctggccccaggaggggtcagcgtatcgctgtgcca
gtgcgcaagctcttcgcccgggaaaaacggccgtatggtctggggatggtgggacggctc
accaaccgcacgtaccggaaacggattgacagctacgtcaagcggcagatagaagacatg
gatgatcacaggcccttcttcacttactggctcaccttcgtgcactccctggtcaccatt
ctggctgtgtgtatctacggcatcgcgcctgtgggcttctcgcagcacgagacggtggac
tcggtacttcggaagcggggtgtctatgagaatgtcaaatacgtccagcaggagaacttc
tggattggccccagctcggaggccctcattcacctgggtgccaagttctccccctgcatg
cgccaggacccacaggtgcacaactttatccttgctgcccgggagcgtgaaaagcactca
gcctgctgtgtgcgcaatgaccggtctggctgtgtgcagacgtcgaaggaggagtgctcg
tctacgttggcagtgtgggtgaagtggccggttcatcctagtgctcccgacctggcaggc
aacaagaggcagtttggttctgtctgccaccaggaccccagggtgtgtgatgagccttcc
tctgaggatccccacgagtggccagaagatatcaccaagtggccgatctgcaccaaaaac
agcgcggggaaccacactaaccaccctcacatggactgtgtcataacgggcaggccctgc
tgcatcggcaccaagggcaggtgtgagatcacctcccgggagtactgtgacttcatgaag
ggctacttccatgaggaggccacactctgctctcaggtgcactgcatggacgatgtctgt
ggcctcctgcctttcctcaatcccgaggtgcctgaccagttctaccgcctgtggctgtcc
ctcttcctgcacgctgggatcctgcactgtttggtgtccgtctgcttccagatgacggtc
ctgcgggacctggagaagctggcaggctggcaccgcatagccatcatctacctgctgagc
ggtgtcacgggcaatctagccagcgccatctttctgccgtaccgggcagaggtaggtccg
gccggctcccagtttggtatcctggcctgtctctttgtggagctattccagagctggcag
atcctggcccgaccctggcgtgccttcttcaagctcctggccgtggtgctcttcctcttt
gcctttgggctgctgccctggatcgacaacttcgcccacatctcaggtttcgtcagcggc
ctcttcctttcctttgccttcctgccttacatcagctttggcaagttcgacctgtaccgc
aagcgttgccagatcatcatcttccaggccgtcttcctgggcctgctggccggcctggtg
gtcctcttctatttctacccagtgcgctgtgaatggtgtgagttcctcacctgcatcccc
ttcacagacaagttctgtgagaagtacgagctggatgctcagctccattga
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