Rattus norvegicus (rat): 303088
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Entry
303088 CDS
T01003
Symbol
Trim41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
303088 (Trim41)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
303088 (Trim41)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
303088 (Trim41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Apolipoprotein
DUF1664
Motif
Other DBs
NCBI-GeneID:
303088
NCBI-ProteinID:
NP_001128209
RGD:
1308885
Ensembl:
ENSRNOG00000002388
UniProt:
B4F7B4
LinkDB
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Position
10:complement(33676348..33687432)
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AA seq
628 aa
AA seq
DB search
MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD
REEEEEVGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEAEEEEEGVFWSSGIGGSNWDNM
DYVWEEEEEEEELDYYLGDVEDLRVEDEDEEEEVLEEDEEEELDPITQLPPPPAPRRCFT
CPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPRHQEALKLFCEVDE
EAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTEL
KSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAANRLEEQAVQLSR
LLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFLTDAIVRKMS
RMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADCCVLGAQGFR
SGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHRRRRLHLPQQ
LLLQREVWCVGTHGKRYQAQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFYNADTLAHVH
TFSAAFLGERVFPFFRVLSKGTRIKLCP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgttgccatgacacccaaccctgtgcagacccttcaggaggaggcggtgtgc
gccatctgcctcgattacttcacggaccccgtgtccatcggctgcgggcacaacttctgc
cgagtgtgtgtaacccagttgtggggcggggaggatgaagaagacagagatgagttggat
cgggaggaggaggaggaggtcggagaggaggaagaagtggaggctgtcggggcaggcggg
ggttgggacacccctatgcgcgatgaagattatgagggtgacatggaggaggaggccgag
gaggaagaggaaggtgtgttctggagtagtggtataggcgggtctaactgggacaacatg
gactatgtgtgggaggaggaggaggaggaggaagaactggactattacttgggggatgtg
gaggacctgagggtggaagatgaggatgaggaggaggaagtcctggaggaagacgaggaa
gaggagctggacccgatcacccaactgccaccacctccagcccctcggaggtgcttcact
tgtccccagtgtcgaaaaagttttcctcggcggagcttccgccccaacctgcagttggcc
aacatggtccaggtgattcggcagatgcatccaacccctggtcgagggagtcgtgtgaat
gaacaaggcatctgtcccagacaccaagaagccctgaagctgttctgtgaggtggatgaa
gaagccatctgtgtggtgtgccgcgaatccaggagccacaaacagcatagtgtggtgcca
ttggaggaggtagtgcaggagtacaaggccaagctacaagggcatgtggaaccacttagg
aagcatctagaggctgtgcagaagatgaaggccaaggaggagaggcgggtgacagagctg
aagagccagatgaagtcagagctggcagctgtggcctcagagtttggacggttaacacgg
tttctggctgaagagcaggcaggactagaacggcgcctccgggagatgcatgaagctcag
ttaggacgtgcaggagcagcagccaaccgccttgaagagcaggctgtccagctaagccgc
ctgcttgctgaagcccaagagcggagccaacaggggggcctgcggctattgcaagacatc
aaggagactttcaataggtgtgaagagatacagttgcagcccccagagatttggtcccct
gacccatgccaaccccatagccacgactttctgacagacgccatcgtgaggaaaatgagc
cggatgttctgtcaggctgcaagagtggacctgacactggacccagacacagctcacccg
gctctgctgctgtcccctgatcgccgtggagtccgcttggcagaacgtcggcaggaggtt
cctgaacattccaagcgcttttcagcagactgctgtgtactaggggcccagggcttccgc
tcgggccggcactactgggaggtagaggtgggtgggcggcggggctgggcagtgggtgct
gcccgtgaatcaacccatcataaagaaaaagtgggctctggggggtcctctgttagcagt
ggggatgccagctcctcacgccatcaccatcgccgccgccggctccatctgcctcagcag
ctcctgcttcagcgggaagtgtggtgcgtgggcacccacggcaaacgataccaggcgcag
agctcaacagagcagacactgctgagcccatgtgagaaaccacggcgtttcggcgtgtac
ctggactatgaggctgggcgcctgggcttctacaacgcagataccttagctcatgtacac
accttctcagctgcctttcttggcgagcgtgtttttcctttcttccgggtactttccaag
ggtacccgcatcaagctctgcccttga
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