Rattus norvegicus (rat): 303188
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Entry
303188 CDS
T01003
Symbol
Rai1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
303188 (Rai1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
303188 (Rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
303188
NCBI-ProteinID:
NP_001258136
RGD:
1308500
Ensembl:
ENSRNOG00000060615
UniProt:
A0A0G2K4G0
LinkDB
All DBs
Position
10:45412748..45507747
Genome browser
AA seq
1887 aa
AA seq
DB search
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYNPQPYTGYE
GGTGTPAGTVATAAADKYHRGNKSLQGRPAFPSYVQDSSPYPGRYSGEEGLQTWGSPQPP
PPQPQPLPGAVSKYEENLMKKTVVPPNRQYPEQGPQLPFRTHGLHVPPPQPQQPLAYPKL
QRQKPQNDLASPLPFPQGSHFPQHSQSFPTSSTYAPTVQGGGQGAHSYKSCTAPSAQPHD
RPMSANASLAPGQRVQNLHAYQPGRLGYEQQQQALQGRHHTQETLHYQNLAKYQHYGQQG
QGYCPADTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPLS
TGAFPTGITDHSHFMPLLNPSPTDAASSVDPQVSNCKPLQKEKLPDNLLSDLSLQSLTAL
TSQVENISNTVQQLLLSKATIPQKKGVKNLVSRTPEQHKSQHCSPEGSGYSAEPAGTPLS
EPPSSTPQSTHAEPQDTDYLSGSEDPLERSFLYCSQARGSPARVNSNSKAKPESVSTCSV
TSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEAI
VEKADKAWAEASSLPKDNGKPPFSLENHSTCLDTVAKTSWSQPGEPEALPEPLQLDKGGS
TKDFSPGLFEDPSVAFATTDPKKTTSPLSFGTKPLLGTATPDPTTAAFDCFPDTTTASSV
DGANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKASDSVGKADAHETSACLGFQEEHA
IGKPAAALSGDFKQQEADGVKEEVGGLLQCPEVGKADQWLEDSRHCCSSADFGDLPLLPP
PGRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLICTKEEAEEVLDTKAGWASPC
HLSGEPAVLLGPSVGAESKVQSWFESSLSHMKPGEGPELERAPGSASTSQGSLAPKPNTP
AVPEGPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPKDLLLPESCTGPPQGQAE
GAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKRVG
KPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPGMPGKDQRSMVLRSRTKPQQVFHAK
RRRPSESRIPDCRPTKKPPANNHLPTAFKVSSGPQKEGRMSQRGKVPKPGTGSKLSDRPL
HTLKRKSAFMAPVPAKKRSLILRSNNGSGVDGREERAESSPGLLRRMASPQRARPRGSGE
PPPPPPLEPPAACLGLATQSSLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLACRV
AGAPPGTPRSPALPEKRSGGSPAGAEEGVGGMGAGQMLPAASGADPLCRNPASSRSLKGK
LLNSKKLSSAADCPKAEAFMSPETLPSLGTARAPKKRSRKGRTGALGPSKGPLEKRPCPG
QALILAPHDRASSTQGGGEDNSSGGGKKPKTEELGLASQPPEGRPCQPQTRAQKQPGQAS
YSSYSKRKRLSRGRGKATHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADS
RTPAFSPFVRVEKRDAYTTICTVVNSPGDEPKPHWKPSSVASSSTSSSEPAGASLTTFPG
GSVLQLRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCLPK
KKPKLKEKVRLEGTLEEASLPLERTLKGLECAASTTAATPTTTTITTTTTLGRLSRPDGP
ADPAKQGSLRTSARGLSRRLQSCYCCDGQGDGGEEVAPADKSRKHECSKEAPAEPGGDTQ
EHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMPCTSCHESGATISCSYEGCTHTYHY
PCANDTGCTFIEENFTLKCPKHKRLPL
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccacagacc
tcacaggagacatcgcgtctggagaactacaggcagccgggtcaggctgggctaagctgt
gatcgacagcggctgctggccaaggactattacaaccctcagccctatacaggctatgag
ggcggcactggtacacctgcaggcacagtggccacagcagctgcagacaagtaccaccga
ggcaacaagtccctgcaggggaggccagctttccccagctatgttcaagacagcagcccc
tacccagggcgctactctggtgaggaggggcttcagacctggggcagcccacagccacca
cctccgcagccacagcctctgccaggggcagtgagcaagtacgaggagaacttgatgaag
aagacagtggtgcctccaaacaggcagtaccctgagcagggcccccaacttcccttccgg
actcacggcctgcatgtcccaccaccgcagcctcagcagcccctggcttaccccaaactc
caaaggcagaaaccacagaatgaccttgcctcccctctgcccttcccccagggcagccac
tttccccagcattcccagtccttccctacctcctccacttatgccccaacagtgcagggt
ggtgggcagggggcccactcatacaagagctgcacagcaccatctgcccagcctcatgac
aggccgatgagtgccaatgcgagcctggctccagggcaacgggtccagaatcttcacgct
taccagccgggccgccttggctatgagcagcagcagcaagcacttcaaggccggcaccac
acccaggaaacactccactaccagaacctcgccaagtaccaacactatggacagcaaggc
cagggctactgtccagcggacacagctgtcaggactccggaacagtattaccagaccttc
agccctagctccagccactcccctgcacgctccgtgggtcgctccccttcctacagctcc
accccgtcaccactgatgcccaatctggagaacttcccttatagccagcagccgcttagt
actggggccttccccacaggcatcacagaccacagccactttatgcccctgctcaacccg
tccccaacagatgctgccagctctgtggacccccaggtcagcaactgcaagcccctgcaa
aaggagaagcttcctgacaacttgctgtcagatctcagcctgcagagtctcacagcgctc
acctcacaggtagaaaacatctccaatactgtgcaacagctcttgctgtccaaagctacc
ataccacagaagaaaggggtcaagaaccttgtgtctaggactccagagcagcacaaaagc
cagcattgtagcccagagggcagtggctactcagctgagccagcaggcacaccactgtct
gagccaccaagtagcacaccacagtccactcatgctgaaccacaagacactgactacctg
agtggctctgaggacccactagagcgcagcttcctctactgcagccaggcccggggcagt
cctgccagagtcaacagcaactctaaggccaagcctgagtctgtgtccacctgttctgtg
acctcacctgatgacatgtccaccaagtctgacgactctttccagagcctgcacagtact
ctgccactggatagcttctccaaatttgtggcaggcgagcgggactgtccacggctgctg
ctcagtgccctggcacaggaagatctggcctctgagatcctgggactgcaggaagccatt
gttgagaaggctgacaaggcctgggctgaggcttccagcctgcccaaggacaatggcaag
ccacccttctcactggagaaccacagcacttgcctggacactgtggctaagacatcatgg
tcacagccgggggagccagaagccctacctgagcccctgcagctggacaaggggggcagc
accaaggacttcagcccggggctatttgaagacccctctgtggcctttgccaccactgac
ccgaagaaaacaaccagtcccctgtcctttggcaccaaacctttgcttgggactgccact
cctgaccccaccacggcagcatttgactgctttccagatacaaccactgccagctcagtg
gatggtgccaacccctttgcctggccagaggagaacctgggcgatgcttgtcctcgctgg
ggcctccaccctggtgagcttaccaagggcttggagcagggtgcaaaagcctcagacagt
gtgggcaaggcagatgcacacgagacctctgcctgcttgggcttccaggaagagcatgcc
atcgggaagccagcagctgcactgtctggggacttcaagcagcaggaggcagatggggta
aaagaggaagtgggtgggttgctgcagtgccccgaggtgggcaaggccgaccagtggctg
gaggatagccggcattgctgttcctccgctgactttggggacctgccactgttgccaccc
cctggcaggaaggaggatctggaagctgaagaggaatactcttcgctatgtgaactgctg
gggagccctgagcagaggcccagcctgcaggacccactgtcccccaaggcccctctgatt
tgtaccaaggaggaagcagaggaggtactagataccaaggctggctgggcctctccgtgc
cacctctctggggagcccgcagtccttctgggcccctccgtgggtgccgaatcaaaggtc
caaagctggtttgaatcttccctgtcacatatgaagccaggagaagggccagagctggag
agagctccaggtagcgccagcacttcacagggctccttggccccaaagcctaacacgccc
gccgtacccgagggacccattgcgaagaaagagcctgtgccacggggtaaaagtttacgg
agccggcgagtacaccgggggctgcctgaggcggaagactctccatgcagggcgccagca
cttcccaaagacctcttgctcccagagtcctgcacggggcccccacagggtcaggcagag
ggggccggggccccaggccggggactgtcagaagggctccccagaatgtgtacccgttct
ctcacagctctgagtgagccccaaactcctggacctccaggcctgactaccacccccaca
cctcctgacaaactgggaggaaaacagcgagctgccttcaagtctggtaagcgggtagga
aaaccgtcacccaaggctgcatccagccccagcaaccctgctgccctgcctgttgcctca
gacagcagccccatgggctccaaaaccaaggagccagactctcccggcatgcctggcaag
gaccagcggtccatggtcctccggtctcgcaccaaaccccagcaggtcttccatgccaaa
cggcggcggccctcagagagcaggatcccagactgccgtcccaccaagaagccccctgct
aacaaccatttacccactgcattcaaggtctccagtgggccccagaaggaaggtcggatg
agccagcggggcaaagtacccaagcccggtacagggagcaagctttcagataggcctctc
cacacactcaaaaggaagtcagctttcatggcacctgtccctgccaaaaagcggagcctc
atcctgcgaagcaacaatggaagtggggtagatgggagggaggaaagggctgagagctcc
cctggcctcttaaggaggatggcctcaccccagagggccagacccaggggcagtggggag
ccacccccacccccacccctagagccacctgctgcatgcctggggttggctacacaatca
tccctgcccagtgctgtgaggaccaaggtgctgccaccccgaaagggccgtggcctcaag
ctggaggccatagtacagaagatcacctcacctggtctcaagaaacttgcatgcagagtg
gcaggggcccctcctgggacaccccggagccctgccctacctgagaaacgttcagggggc
agtccagctggggcagaagagggtgtaggaggaatgggtgcagggcaaatgctaccagca
gcttcgggagctgacccattgtgcagaaacccagccagcagcaggtccctaaaaggtaaa
ctcttgaatagtaagaagctgtcctctgctgctgactgccccaaagctgaggccttcatg
tccccggagaccctcccatccctagggactgcccgggcaccgaagaaaaggagccggaaa
ggcaggactggggccttgggaccctccaaaggtccattggagaagcggccctgtcctggc
caagctctgatcctcgctccccacgacagggccagcagcactcagggcggaggtgaggac
aactccagtggaggaggcaagaagccaaagacagaggagctgggactggcctcccagccc
ccagaaggccggccctgccagccccagacaagggcacagaagcagccaggccaagccagc
tatagcagctattcaaagcggaagcgcctcagccgtggccgaggaaaggccacccatgct
tcaccctgtaaaggccgtgccactcggagaaggcagcagcaggtactgcccctggatcct
gcagagcctgaaatccgactcaaatacatttcttcttgcaagaggctgagggcagacagc
cgcaccccagccttctcgccctttgtgcgggtggagaagcgagatgcatacaccaccata
tgcactgttgtcaactccccaggggatgagccgaagcctcactggaagccatcctctgtt
gcctcctcttccacctcctcctcagaaccagctggggcttctctgaccacattccctgga
ggctctgtgctacagctgaggccctccctgcccctctcctccaccatgcatctggggccg
gtggtgtccaaggccctaagtacctcttgccttgtctgctgcctctgccaaaacccggcc
aatttcaaggaccttggggacctctgtggtccctactaccctgaacactgcctcccaaaa
aagaagccaaaactcaaggagaaggtacggctggagggcaccttggaggaggcctctctg
cctctggagagaacactcaaaggcctggaatgtgcagccagcaccacggctgccacccct
accacaaccaccatcactaccaccacaaccctggggaggctgtccaggcctgatggccca
gccgaccctgccaagcagggttccctgcgcaccagtgcccggggcctgtcaaggcggctg
cagagttgctattgctgtgatggtcagggggacgggggtgaggaggtggccccagctgac
aagagccgcaaacatgaatgcagcaaagaggcccctgcagaacctggtggggacacccaa
gagcactgggtacatgaggcctgtgctgtgtggaccagcggggtgtacctggtggccggg
aagctctttgggctgcaggaggccatgaaagtagctgtggacatgccatgtaccagctgt
catgagtccggagcaaccatctcgtgctcctatgaaggctgcacccacacctaccactac
ccatgtgccaatgacacaggttgcacgttcattgaggagaattttactttgaagtgcccc
aaacataagaggctgccgttgtaa
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