Rattus norvegicus (rat): 303241
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Entry
303241 CDS
T01003
Symbol
Chd3
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 3
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
303241 (Chd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
303241 (Chd3)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
303241 (Chd3)
Chromatin remodeling factors
NuRD complex
303241 (Chd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
HDA2-3
PHD-1st_NSD
ResIII
HTH_Hrp3
PHDvar_NSD
DEAD
HMG_box
PHD_2
AAA_22
DIX
Motif
Other DBs
NCBI-GeneID:
303241
NCBI-ProteinID:
NP_001406850
RGD:
1311923
Ensembl:
ENSRNOG00000009722
LinkDB
All DBs
Position
10:complement(54562437..54588842)
Genome browser
AA seq
2058 aa
AA seq
DB search
MASPLRDEEEEEEEMVVSEEEEEEEEEGDEEEEEVEAADEDDEEEDEEGVLGRGPGHDRG
RDRHSPPSCHLFPPPPPPPPPLPPPPPPDKDDIRLLPSALGVKKRKRGPKKQKENKPGKP
RKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKREKKTKRRKRGEGDG
GHKQVEQKSSATLLLTWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKM
MTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSATPIAPSGPPPALPP
PPAPEIQPPPIRRAKTKEGKGPGHKRRGKSARAPDGRKKLRGKKMAPLKIKLGLLGGRRR
KAGSCVFQGDEGPEPEAEESDLDSGSVHSASGRPDGPVRAKKLKRGRPGRKKKKVLGCPT
VTGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCE
KEGVQWEAKEEEEDYEEEGEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNP
PLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGDPDAPPPRVLQGR
SEREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSD
KRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEE
DEMNIPEYDDHKQSYWRHRELIMGEDPAQPRKYKKKKKEIQGDGPPSSPTNDPTVKYETQ
PRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTK
GPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAF
KMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKID
HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML
RRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDL
KKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQM
TKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL
ATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLT
HLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARLLD
RNQDATDDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHH
YEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSK
RQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQWLVRDLR
GKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEF
EHINGRWSMPELMPDPSADSKRSSRASSPTKTSPTTPEASTTNSPCTSKPATPAPSEKGD
GVRTLLEKDDTENPEEKPEKSSKVGEKMETEIDSPSPAPSLGERLEHRKILLEDDAPGVP
GEIEPEPGYRGDREKSASEPTPGERGEEKPLDGQEHRERTEGETGDLGKREDVKADRELR
LGPPRDEPRPNGRREEKVEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRH
DYWLLAGIVLHGYARWQDIQNDAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNLSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAFPPGP
YATPPGYGAAFSAAPVGALAAAGANYSQMPAGSFITATTNGPPVLVKKEKEMVGALVSDG
LGLDRKEPRAGEVICIDD
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctctgagggacgaggaggaggaggaggaggagatggtggtgtcggaggag
gaagaagaggaggaagaagagggcgacgaggaggaggaggaggtggaggcggccgacgag
gacgatgaggaggaggacgaagagggagtactcgggcgcgggccgggccacgaccggggc
cgcgaccgccacagcccccccagctgccacctcttcccgccgccgccgccgccgccgccg
ccgctgccgccgcccccgccgccagataaggatgatatccggctgctgccttcagcattg
ggtgtgaagaagcgaaaacggggtcccaagaagcagaaggaaaacaagccaggcaaaccc
cggaaacgaaagaagcttgacagtgaagaggagtttggctcagagcgagatgagtaccgg
gagaagtcagagagtggaggcagcgagtatggaactggaccaggtcggaagcgaaggagg
aagcaccgggaaaagagagagaagaaaacaaaacggaggaaaaggggagaaggggatggg
ggacacaagcaggtggagcagaagtcatccgccaccttgcttctgacctggggcttggag
gatgtggaacacgtgttctctgaggaggactatcacacacttactaattacaaagccttc
agtcagttcatgaggcccttaattgctaagaagaatcctaagatcccgatgtcgaagatg
atgaccatcctgggggccaagtggagagagttcagcgccaataaccccttcaaagggtca
gcagctgctgtggcggcagcggcagcggcagcagcagcagctgtagctgagcaggtgtca
gctgctgtctcctcagccacccccatagcaccatctggacccccccctgcccttccacca
ccccctgctcctgaaatccagcccccacccatcagaagagccaaaaccaaagagggcaaa
ggtccaggccacaagaggcggggtaagagcgcccgagcccccgatgggcgcaagaagctt
cgaggaaagaagatggcaccactcaaaatcaagctagggctgctggggggcaggaggagg
aaggcgggctcgtgtgtttttcagggtgatgagggccctgaaccagaggctgaggagtca
gacctggacagtggtagtgttcatagtgcctcaggccggcctgatggtcctgtccgtgcc
aagaaactgaagcgaggccggccaggaaggaagaagaagaaggtcctgggctgtcctaca
gtgaccggggaggaggaagttgatggctatgagacggatcaccaggattactgtgaggtg
tgccagcagggcggggaaattattctgtgtgacacctgcccccgtgcctaccacctcgtc
tgccttgaccctgagcttgatcgagctcctgagggcaaatggagctgcccccactgtgag
aaggaaggggtacagtgggaggccaaggaagaagaggaagactatgaggaggaaggggag
gaaggagagaaggaggaagaggatgaccacatggagtactgccgagtgtgcaaggacggc
ggggagctcctgtgctgtgacgcctgcatctcttcctaccacatccactgtctgaacccc
ccactgcccgacatccccaatggtgaatggctgtgccctcgatgcacgtgtcctgtgcta
aagggccgtgttcagaagatcttgcactggcgatggggggagccacctgtggcagtgccg
gccccgcagcaggcagacggggatccagacgccccaccccctcgtgttcttcaaggcaga
tcagagagggagttctttgtcaagtgggtgggactgtcctactggcattgctcctgggcc
aaggagcttcagctggaaatcttccacttggtaatgtaccgaaactatcaacggaaaaat
gacatggacgagcccccaccgctggactatggatctggtgaggacgatgggaagagtgat
aagcggaaggtgaaggacccgcactacgcagagatggaggagaagtactaccgtttcggc
atcaagccagagtggatgactgtgcaccgcattattaaccatagtatggataaaaagggg
aattaccactatcttgtgaaatggaaggacctgccttacgaccagtctacatgggaggag
gatgagatgaacatccctgagtatgacgaccataagcagagctactggaggcaccgtgag
ctaattatgggcgaggaccctgcacagcctcgaaagtacaagaagaagaagaaggagata
cagggcgatgggcctcccagttcccctactaatgatcctacagtgaaatatgagactcag
ccacggtttatcacagccacaggaggcacgctgcacatgtatcagctggaagggctgaac
tggctgcgcttctcatgggcccaaggcactgacacaattctggctgatgagatggggctg
ggcaagaccatccaaaccattgtctttctctactcactctataaggagggccacacaaaa
ggtcccttcctggtaagtgctccactctctaccatcatcaactgggaacgggagttccag
atgtgggcacccaagttctatgtggtcacatacacgggtgacaaggatagccgggccatt
attcgagaaaacgagttctcctttgaggataatgccataaaaggcgggaagaaagctttt
aagatgaagagagaggcacaggtgaagttccatgttctcctgacatcatacgagctgatc
accattgatcaggcagctctaggctccattcgctgggcctgtcttgtggtggatgaagct
catcgactcaagaacaatcagtccaagtttttcagggtcctcaatggctacaagatagat
cataagttgttgttgacggggactccactgcagaataacttggaggagctcttccacctt
ctcaacttcctcactccagagaggtttaacaacctggagggctttctggaggagtttgct
gacatatccaaagaggaccagattaagaaactgcatgatttactgggaccacacatgctt
cggagactcaaggcagatgtctttaagaacatgccagccaagacagagctcattgttcga
gtggagctaagccccatgcagaagaaatactacaagtacatcctaactcgaaattttgag
gccttgaactctcgaggtggtgggaaccaagtgtccctgcttaacatcatgatggacctt
aagaagtgctgtaaccacccgtacctcttccccgtggctgctatggagtctcccaaactc
cccagtggggcttatgagggtggggcacttattaagtcgtcagggaagctgctgctgcta
cagaagatgctgcggaagctgaaggagcaaggacacagagtgctcatcttctcccagatg
accaaaatgttagaccttctggaagacttcctagactacgaagggtacaagtatgagcgc
attgatggtggcatcacgggcgcccttaggcaggaggccatcgatcgctttaatgctcct
ggagcccaacaattctgcttcctcctgtccacccgggctggtggactgggcatcaacctg
gccactgctgacactgtcatcattttcgattctgattggaacccccataatgacatccag
gccttcagcagagcccatcggattggccaggccaacaaagtgatgatttaccggtttgtg
acccgagcctcggtagaagagcgaatcacacaggtggctaagagaaagatgatgctgaca
cacctggtcgtgcggccaggcctgggctccaaggctggttccatgtccaagcaggagttg
gatgacatcctcaaatttggcaccgaggagctattcaaagatgaaaatgagggagagaat
aaggaggaggatagcagtgtgatccactatgacaatgaagccattgctcgactgctagac
cgaaaccaggatgcgaccgatgacacagacgtgcagaacatgaacgaatacctcagctcc
ttcaaggtggcacaatatgttgtgcgggaggaagacaagattgaggagatcgagcgagag
atcatcaagcaggaggagaatgtggaccctgactactgggagaagctactgcgacaccac
tatgagcagcagcaggaagacctcgcccggaacctaggcaaggggaagcgagtccgaaag
caggtcaactacaatgacgctgcccaggaggaccaagataaccagtcagaatactcagtg
gggtccgaggaggaggatgaagacttcgatgagcgtcctgaagggcgtcgacagtcaaag
aggcagcttcgaaatgagaaggacaagccgctgcctccattgctggctcgagtcgggggc
aacattgaagtattgggattcaatacccggcagcggaaggctttccttaatgctgtgatg
cgctgggggatgccgccacaagatgctttcaccacacagtggctagtgagagacctgagg
ggcaaaacggagaaggagttcaaggcctatgtgtctttgttcatgcgccatctgtgcgag
cctggggcagatggctctgaaacctttgcggatggggtccctcgggaggggctgagtcgc
cagcaggtgttgacccgcattggagtcatgtctctcgtcaagaagaaggtgcaagagttt
gagcatatcaatggacgctggtcaatgccagagctgatgcctgaccccagtgctgactcc
aaacgctcttccagagcctcctctccaaccaaaacgtctcccaccactcctgaggcttct
acaaccaacagtccttgcacctctaaacctgctactccggctccaagtgagaagggagat
ggtgtaaggacactgctggagaaggatgacactgagaacccggaagagaagccagagaag
agcagcaaagtgggagaaaagatggagacagagattgattctcccagccctgccccatca
cttggagaacggctagaacataggaagattctgttagaggatgatgcaccaggggtacct
ggagagatagagcctgaacctgggtaccgaggagacagggaaaagtctgcctcagagcca
acgccaggagaaaggggggaggagaagccattggatggacaggaacacagggagaggaca
gagggggagacaggggatttgggcaagagagaagatgtaaaagcagatcgggagcttcga
cttgggcctcctcgggatgagccacggcccaatgggcgccgtgaggagaaggtggagaag
ccaagattcatgttcaacattgctgatggtggtttcacagagctgcacacactgtggcag
aatgaggaaagagcagctatttcctcggggaaactcaatgagatctggcaccggagacat
gactactggcttctagctggcattgtcctccatggctatgcccggtggcaagacatccag
aacgatgctcagtttgccattattaatgaaccatttaaaacggaagccaataaggggaac
ttcctggagatgaaaaataaattcctggcccggaggttcaagctcctggagcaggcgctg
gtgatcgaggagcagctgcggcgggcggcctacctgaacctgtcacaggagccggcgcac
cccgccatggccctccacgcccgctttgccgaggccgagtgcctagccgagagccaccag
cacctctccaaggagtcgctggcagggaacaagccagccaacgctgtcctgcacaaggtt
ctgaaccagctggaggagttgctgagcgacatgaaggcagatgtgacccgcctgccagcc
acgctgtcccgaataccccccatcgcagcccgccttcagatgtccgagcgcagcatcctc
agccgactggccagcaagggcacggagcctcaccccacaccggcctttcccccgggtcct
tacgccacacctccggggtacggggcagccttcagcgccgcacccgtaggggccctggcc
gccgcaggcgccaattacagccagatgccagcagggtccttcatcacagccaccaccaac
ggccctccagtgctggtgaagaaagagaaggaaatggtgggggcgttggtgtcagacggg
ctggggctggatcggaaggagccccgagcaggggaggtgatttgtatagacgactga
DBGET
integrated database retrieval system
