Rattus norvegicus (rat): 303281
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Entry
303281 CDS
T01003
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
303281 (Supt6h)
03036 Chromosome and associated proteins [BR:
rno03036
]
303281 (Supt6h)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
303281 (Supt6h)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
303281 (Supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
303281
NCBI-ProteinID:
NP_001178749
RGD:
1309290
Ensembl:
ENSRNOG00000012240
LinkDB
All DBs
Position
10:complement(63601990..63638851)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNHEGEVVPRVTKKFVEEEDDGEEEEEENLDDQDERGNLKDFIND
DDDEEEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDDEDDEEEYGKEEHEKEAIAGEIFQDEEGEEGQEAVEAPMAPPDEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKAAEDDELEEEADWIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
VNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSTQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagtgaggctgaagagtcagaagaagaatacaatcatgaaggc
gaggtggtacctagagtcaccaagaagtttgtggaagaggaggatgatggtgaggaggag
gaagaggagaatctagatgatcaagacgagcgaggcaacctgaaagactttattaatgat
gatgatgatgaagaggaaggagaggaggatgaaggcagtgactctggtgactcagaagat
gatgttggccacaagaagagaaaacgcacatcctttgatgaccgcctggaagatgatgat
tttgacctcattgaggagaatttgggtgttaaagtcaaacgaggacaaaaataccgacgt
gtcaaaaaaatgtctgatgatgatgaagatgatgaagaggaatatggcaaagaggaacac
gagaaggaggccattgcaggggaaatcttccaagatgaagaaggggaagaagggcaggag
gctgtagaggcccctatggctcctccagacgaggaggaggaagatgatgaagagtcagat
attgatgatttcattgtggatgatgatggacagcctctgaaaaaaccgaaatggcgaaaa
aagcttcctggatatacagatgcagccctgcaggaagcccaggagatcttcggtgtggac
tttgactatgatgaatttgagaaatacaatgaatatgatgaagaactggaggaagactat
gagtatgaggatgacgaggctgaaggtgagatccgagtgcgccccaagaagaccaccaag
aagcgcgtaagtcgcaggagcatctttgagatgtatgagccaagtgaactggagagcagt
cacctcacagaccaggacaatgaaatccgagccactgacctgcctgagaggttccagctc
cgctccatcccagtcaaggcagctgaagatgatgagctagaagaagaagctgactggatc
tatagaaatgcctttgcgacaccaaccatctccctccaggacagctgtgattacctggac
cgtgggcagccaactagtagcttcagtcggaaagggcccagcacagttcagaagatcaaa
gaggccctgggcttcatgcggaatcagcattttgaggtacctttcattgccttctaccga
aaggagtacgtggagcccgagttgcacatcaatgacctgtggagggtgtggcagtgggat
gagaagtggactcagctgagaatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttatcagtatgagcaaatttctgctgaccctgataaacctcttgctgatggcatc
cgggctttagatactactgacatggagaggctcaaagatgtgcagtcaatggatgaactg
aaagatgtctacaaccatttcttactttactatggccgtgacatccccaagatgcagaat
gccgccaaggctagccggaaaaagctaaaacgcataaaggaggatggcgatgaagaaggt
gaaggtgaggaggctgaagatgaggagcagaggggaccagagctcaagcaagcctcccgc
cgagacatgtacaccatctgccagagtgccggactagatggcctagccaaaaagtttggc
ctcacacctgagcagtttggggagaacctccgtgacagctaccaacggcatgagacagag
cagttccctgcagaacctttggagctggccaaggattacgtttgcagccagttccctaca
ccagaagctgtgcttgaaggtgcccgatacatggttgctctacagattgcccgggagccc
cttgtcagacaggtgctgagacaaacctttcaggagagagctaagctaaacataacccca
accaagaaaggtagaaaggatgtggatgaggcccactatgcttattcttttaagtactta
aagaacaagcctgttaaagagctaagagacgaccaattcctcaagataggcctggctgaa
gatgaaggcctgctcaccattgacatcagcatagacatgaagggagtggaagggtatggt
aatgaccagacatactttgaggagatcaagcagttttactaccgggatgagttcagccat
caagtccaggaatggaaccggcagcgcactatggccattgagcgagctctgcagcagttc
ctctatgtgcaaatggccaaagaacttaagaacaaactgctcgctgaggccagggagagt
gttgtaaaggcctgtagccgaaagctctacaactggctgcgagtggcgccctaccgacca
gatcagcaggtagaggaggatgacgactttatggatgaaaaccaggggaagggcattcga
gtcttaggcattgctttctcctctgccagagaccaccctgtgttctgtgccctagtcaat
ggtgaaggagaagtgactgatttcctccgtctgccccattttaccaaacggcgaactgcc
tggagggaagaggagcgggaaaagaaggctcaagatattgagactctaaagaagtttctt
gtgaataagaagcctcatgtagttactgttgcaggagaaaacagggatgcccagatgttg
attgaggatgtgaagcgcatagtgcatgagctggaccaaggccaacagctttcttctatt
ggggtggagctggttgacaatgagttggccattctgtatatgaacagcaaaaaatcagag
gcagagttccgtgattatccaccagttttgagacaagcggtttctctagcccggcgcatt
caagaccctctgatagaatttgcccaggtgtgcagctctgatgaagacatcctatgtctc
aagtttcatcccttgcaggagcatgttgtgaaagaggagctgctcaacgccttgtactgt
gaattcatcaatcgggtcaatgaggttggggtcgatgtcaaccgtgccattgcccatcct
tacagccaggccttgatccagtacgtctgtggcctgggacctcgaaaagggacccacctg
ctgaagattttgaaacagaacaacactcgactcgagagccggactcagctggtcaccatg
tgtcacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacactgcc
tctctgggggacagcactgactcatacattgaagttcttgatggttctcgagtccaccct
gaaacatatgagtgggccagaaagatggcagtagatgccttggaatatgacgagtctgca
gaggacgccaatcctgcaggagcccttgaggaaatcttggaaaacccggagcgactaaag
gatttagaccttgatgcctttgcagaagaactagagagacagggctatggtgacaaacac
atcacactctatgacatccgagcagagctcagttgtagatataaggacctccggacggcc
taccgctctcctaacacagaggagatcttcaatatgctaaccaaagagacaccagagacc
ttctacattggaaagctcatcatctgtaatgtcacgggcatcgctcacaggcgcccacag
ggtgagagctatgaccaggccatccgaaatgacgagacagggctgtggcagtgccccttc
tgtcaacaggacaacttccctgagctgagtgaggtctggaaccattttgacagtggatcg
tgccctggccaggccattggcgtgaaaacacggctagacaacggcgtcactggcttcatc
cctaccaaattcctcagtgacaaggtggtgaagaggccagaggagcgtgtgaaggtgggg
atgactgttcactgccgcatcatgaagatcgatattgaaaagttcagtgcagacctgacc
tgccggacctcagacctcatggacaggaacaatgagtggaaactgcccaaggacacctac
tacgacttcgatgccgaagccgcagaccacaagcaggaggaggacatgaagcgaaagcag
cagcggaccacatacatcaagcgagtgattgcacacccgtccttccataacataaatttt
aagcaagcagaaaagatgatggagacaatggaccaaggggacgttatcattcggccgagc
agcaagggggagaaccacctgacagtgacctggaaagtcagtgacggcatctaccagcat
gtggatgtgcgagaggagggcaaggaaaatgccttcagcctgggagccactctgtggatc
aacagtgaggaattcgaagacttggatgagattgttgcccgctacgtccagcccatggct
tcctttgctcgagaccttctgaaccacaagtattaccaggactgtagtggtggggaccga
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttac
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagagtatgtaacagtgactcctgaaggattccggtaccggggccagatt
ttcccaactgtgaatggactcttccggtggtttaaggatcattatcaggatcctgtacca
ggcattactcccagtagcagcagcagaacacggacccccgcttctatcaatgctacccca
gccaacatcaatcttgcagatctgacacgggctgtgaatgccttgcctcagaacatgact
tcacagatgttcagtgccattgctgctgtgacaggccaaggacagaaccccaatgctacc
ccagcccagtgggcatccagccagtatggctacggtggcagtggaggaggcagtagcgcc
taccatgtgttcccaacgccagcccaacagccagtggccacaccactaatgaccccgagc
tactcctatacaaccccgagccagcccattaccaccccacaataccaccagctccaggcc
agcactaccccacagtctacccaggcccagccccagccttcctccagctcccgacaacgg
caacagcagccaaagtccaacagccatgcagctatcgattggggcaagatggccgagcag
tggctacaggaaaaggaggcagaacgacggaaacagaaacagcggctgaccccaagaccc
tctcccagccccatgatcgagagcacccccatgtccattgctggcgatgcgaccccactc
ctggacgagatggatcgatag
DBGET
integrated database retrieval system
