Rattus norvegicus (rat): 303313
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Entry
303313 CDS
T01003
Symbol
Scarf1
Name
(RefSeq) scavenger receptor class F member 1 precursor
KO
K24318
scavenger receptor class F member 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
303313 (Scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
303313 (Scarf1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
303313 (Scarf1)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Phagocytosis
Scavenger receptors
303313 (Scarf1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
303313 (Scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
EGF_2
C8A_B_C6_EGF-like
Motif
Other DBs
NCBI-GeneID:
303313
NCBI-ProteinID:
NP_001100492
RGD:
1309330
Ensembl:
ENSRNOG00000059618
UniProt:
A0A8I5ZRK9
A6HGS0
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All DBs
Position
10:60857494..60869795
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AA seq
823 aa
AA seq
DB search
MLTAMGLGLVFSLLLFWTREIQGSTLDPAGQHVCIGSSPSELQCCSGWRQKDQECTIPIC
EGPDACKKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRETCPCHPRGQCEPATGV
CQCQPNYWGKLCEFPCTCGPHGKCDPKTGLCHCDPGWWSPTCRRPCQCNPLARCDQVTGA
CICPTGWWGHRCSFSCNCHTSPCLQDSGRCTCLQGWWGPECSRRCQCVRGQCSVTSGHCS
CPPGFQGALCELPCKPGRYGAQCKESCGHCEPNATCSPVTGNCESCKPGWNGTQCKQPCP
PGTFGERCTGKCPRCRLEEPCQVETGHCQRCDPGWLGHRCEKPCPLGTFGKGCSSTCPAC
VQGTCNAVTGECVCSAGYWGTSCNSSCPSGFHGNNCSMPCQCPEGLCHPESGACQLGPHG
KNALIVGILVPLLLLLMGIICCVYCCSASRLDPKDRPERNGAAFFRMKQQVWGALTSLGS
ALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEEDEAHAYF
MPPREETVPMTQEESPAASLPGGPFPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFA
PQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQENPEEDVPTATSSGDAATS
HGQLPPGSRTVTECVETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRLGNYQKDQ
AAPKVKSAIPKPLRRSLGRNQASSGLSQSSGSAPGAVLSGAMESTAVKPEEASRGLGDGI
ESLGTVQEPVVGSSSPEQGSQKQAEEQEQEEPLYENVVPMLQH
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgccatgggactagggctggtgttctcactgttgctgttctggactcgggag
atccagggatccacgctagatccagctggtcagcacgtctgtataggcagcagcccctct
gagctccagtgttgttcgggctggaggcagaaggaccaagaatgcaccatccccatctgt
gaggggcctgatgcctgcaagaaagatgaggtgtgtgtgaagccgggcctctgtcgatgt
aaacctggattcttcggagcccattgcagctcccgctgtccaggccagtactggggcccc
gactgtcgtgagacctgcccttgccatccacgtggccagtgcgaaccagccacgggtgtg
tgccagtgccaacccaactactggggcaagctctgtgagttcccctgcacctgcggcccc
cacggaaaatgtgacccaaagacgggcttgtgccactgcgaccccggctggtggtcacct
acgtgtcgtcgcccctgccaatgcaacccattagcgcgctgtgaccaggtcactggagcc
tgcatatgcccgacgggctggtggggccaccgctgcagcttcagttgcaactgccatacc
tcgccctgccttcaggactccggccgttgcacctgcctgcagggctggtggggtccagag
tgtagtcgcaggtgccagtgtgtgcgaggacaatgcagcgttacttccggccactgctcc
tgccctcctggcttccaaggagccctctgtgagctgccttgcaagcccggccgctatgga
gcgcagtgcaaagaaagctgtggccactgtgagccgaatgccacgtgctctccagtcacc
ggcaactgtgagtcctgcaagccgggctggaacggaactcagtgcaagcagccatgtcct
ccaggcacctttggtgagaggtgcactgggaagtgcccccgctgccgacttgaagagccc
tgtcaagtggaaactgggcactgccagcgctgcgaccctggttggctggggcacaggtgt
gagaaaccttgtccccttggtacctttgggaagggctgcagctctacctgccctgcctgt
gttcaggggacttgcaatgcggtgactggggaatgtgtctgcagtgctggctactggggg
accagctgcaatagttcctgcccttctggcttccacggaaacaactgttctatgccctgc
caatgcccagaggggctctgccaccctgagtctggggcctgccagctgggcccacatggt
aaaaatgccctcattgtgggcatcctggtacctctgctgctgctcctcatgggcattatc
tgctgtgtctactgctgctcagcttcccgactggaccccaaggacaggcctgagagaaat
ggagctgcctttttcaggatgaagcagcaggtgtggggggccctcaccagcctgggctcg
gcactgccctgtggctccctcagtaactacaagctaccttgggtgacagtttctcaccat
gatccagaggttcccttcaaccacagtttcatcgagccaccctctgctggctgggcctct
gacgactctttctcgtctgatcccgactctggagaagaggacgaagctcacgcctacttc
atgccacctcgagaagagacagtccctatgacccaagaagaatcaccagcagccagcctt
cctggaggccccttccctccccctgaggacgcctccacaccattccccatcccacgcacc
tccagcctggctcgggccaagaggccatccgtctcctttgctgaaggcactaagtttgca
ccacaaaatggccgaagctctggggatctctccagccccatacgaaaacccaagagactc
tccagaggtgctcagccacgtcctgaagggcaagaggctgaggagtctacaggcccagag
caagaaaacccagaagaggatgttcctacagccacaagctctggagatgctgccactagt
cacggccaacttccacctggtagccggacagtgaccgaatgtgtggaaaccaccgatgga
ggcatccaggagagctcagggtctgtggccactatctatatgctggcagggacaccccag
aaacctgagggccctgtctggtctgtctttcgtcgtttgggaaactaccagaaagatcag
gcggcgcccaaggtaaagagtgccatccctaagcctttgcgccgatctctgggtcggaac
caggccagctccgggctgtcccagagctctggctcagctccaggtgctgtgctctccggg
gccatggagtccaccgcagttaagccagaggaagcatccagaggtctgggagatggcatt
gagagcttagggacagtccaggagccagtcgttggaagcagttccccggagcagggttcc
cagaagcaggctgaagaacaggaacaggaggagcccctgtatgagaatgttgtgcccatg
ctgcagcattga
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