KEGG   Rattus norvegicus (rat): 303372
Entry
303372            CDS       T01003                                 
Symbol
Nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    303372 (Nle1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    303372 (Nle1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 DSE1_N Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EML ASA1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR41 NLE CFAP251_N Beta-prop_VPS8 Beta-prop_DCAF4 PAC11 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_SPT8 Tricorn_2nd eIF2A RMC1_N TRM82_WD Beta-prop_RIG_1st Ge1_WD40 Beta-prop_NUP159_NUP214 PD40 Beta-prop_NWD2_C Cytochrom_D1 DNAI3_WD
Other DBs
NCBI-GeneID: 303372
NCBI-ProteinID: NP_001121006
RGD: 1308301
Ensembl: ENSRNOG00000008287
Vega: OTTRNOG00000000460
UniProt: B2GV82
LinkDB
Position
10:complement(68331609..68342562)
AA seq 487 aa
MAAAVEVSDEAAASDVQRLLVQFQDEGGQLLGSPFDVPVDITPDQLQLVCNALLAQDEPL
PLAFYVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVI
SVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNG
QILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRC
ERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD
YALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSP
AEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVY
QIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDK
CLRIWRR
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggcggcggccgtggaggtttctgacgaggcggcggcaagcgacgtacagcggctgctc
gtgcagttccaggatgagggcggccagctgctgggttccccgttcgacgtgccggtggac
atcacgccggaccagctgcagctcgtgtgcaacgcgctgctggcccaggacgagcccctg
ccccttgctttctatgtccacgatgctgagattgtgtcctcgctggggaagacactggag
tcgcagtctgtggagacagagaaaatcgtagacatcatctaccagcctcaagctgtcttc
agggtccgcgccgtgacacggtgcactagctcattggagggtcacagcgaagccgtcatt
tctgtggccttcagccccacgggaaagtacctggccagtggttccggagacaccacagtg
cgcttctgggatctcagcactgagacaccgcacttcacatgcaaaggacaccggcactgg
gtccttagcatatcctggtccccagatggcaagaaacttgcctcaggctgcaagaatggc
cagattctcctgtgggacccaagcacagggacacaggtgggcaggaccctcactggccac
agcaagtggatcacaggcctaagctgggagccccttcacatgaaccccgagtgccgctac
gtggccagcagctccaaggatggcagtgtacgagtctgggatacaacggcaggccgctgt
gaacgcatcctcaccgggcacacacagtcagtcacctgcctccgatggggaggagatggg
cttctatattctgcttcccaggaccgaactatcaaagtctggagggctcatgacggtgtg
ctgtgccgtactcttcaaggtcatggtcactgggtgaataccatggcgctcagcacagac
tatgccctgcgcacgggggcctttgagcctgctgaagccacagtgaatgcccaagacctg
caggggtccttgaaggagctgaaggagagggcatcgagccgctacaaccttgtgcggggc
caaggcccagagaggctggtctctggctcagacgacttcaccttattcctgtggtcccca
gcagaggacaagaagccccttgcccggatgacaggacaccaggccctcatcaaccaggtg
ctcttctctcctgactcacgcatcgtggccagtgcctccttcgacaagtctatcaagctg
tgggatggcaggacgggcaagtacctagcttccctgcgtggccatgtggctgctgtgtac
cagattgcctggtcagctgacagccgattgctggtcagtggcagcagtgacagcacgctg
aaggtgtgggatgtgaaggcccagaaactgaccacagacctgcctggccacgccgatgag
gtatatgctgttgactggagtccagatggccagagagtagcaagcggtgggaaagacaag
tgcctccggatatggagaagatga

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