Rattus norvegicus (rat): 303479
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Entry
303479 CDS
T01003
Symbol
Calcoco2
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04137
Mitophagy - animal
rno04140
Autophagy - animal
rno05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
303479 (Calcoco2)
04137 Mitophagy - animal
303479 (Calcoco2)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
303479 (Calcoco2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
303479 (Calcoco2)
03029 Mitochondrial biogenesis [BR:
rno03029
]
303479 (Calcoco2)
Membrane trafficking [BR:
rno04131
]
Autophagy
Xenophagy
Cargo receptors
303479 (Calcoco2)
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
303479 (Calcoco2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKICH
HALZ
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
303479
NCBI-ProteinID:
XP_063126126
RGD:
1559974
LinkDB
All DBs
Position
10:complement(81552084..81568266)
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AA seq
859 aa
AA seq
DB search
MEERHSNFSQVLFNNVEKFYIPGDVVCCYTLTEKFVPRPKDWVGVFKVGWETTQEYYTFM
WAPMPDDLNTESATQQKIQFKAYYLPKDEEHYQFCYVDEDGLVQGISIPFQFPPPDSEED
IMIVINKEKMDEMEQLREELYQENQELKDKYADLHEQLQRKQVALEATQRMNESLGQEVE
QKASWEKQKASWEEQKASWEEQKASWESEMLHLKEYNQKITSEKENMEIRIEDLLIQLMY
KYRGLVDFILKDEEKTKHWERLQKESNSQLSSSFTEQKQHWKELERIVEMLKENDAAVWK
EEQELKARVVALQQKLININIDYNHLQQDNDILCGENRRLNTEICLLKNENKALRSSLAN
KDVSSNERAAEPEVPTPQVDAEPEAPTPQVDAEPEDPSAQADVEPEVPSAQADAEPEVPS
AQADAEPEVPSAQADAEPEVPSPQADAEPEVPSPQADAEPEVPSAQADAETEVPSQADAE
PEVPSPQADAEPEVPSAQADAEPEVPSPHVDAEPEVPSPHIDAEPEAPSAQADAEPEAPS
AQADAEPEVPSPHVDAEPEVPSAQADAEPEVPSAQADAEPEAPSAQADVEPEAPSAQADA
EPEAPSAQVAEPEVPSAQADAEPEVPSAQADAEPEAPSAQVAEPEVPSAQADAEPEVPSP
QADAEPEVPSPQADAEPEVPPAQVDAEPEVPSPQADAEPEVSSPQAAAEPEVSSPQVDAE
PEVSSPQAAAEPEVPSPQADAEPEVPSPQADAEPEVPSPQVDAESEAPSPQAAPESEVPS
PQAAPESEVPSAQRAGSSNPLLWECDEDSYTGISGSSLYMDPSWEQLEPKDLYCPFCMKT
YRATRRWVSWDNCPTLIPA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgccatagcaatttctctcaggtcctgtttaacaatgtggagaagttctat
attcctggagatgtcgtgtgctgttacaccctcactgaaaagttcgtccctcgtcccaag
gactgggtcggcgtttttaaagtagggtgggagacgacccaggagtattacaccttcatg
tgggcccccatgcccgatgacctaaacacagaatcagccacacagcagaaaatccaattc
aaagcgtactatctgcccaaggatgaagagcattaccagttctgctatgtggatgaagat
ggtttggtccagggaataagtatccccttccagtttcctccaccagactctgaggaggac
ataatgattgttatcaataaggaaaagatggacgagatggaacagctcagggaggagctt
taccaagaaaaccaggaactgaaggacaagtatgctgacctccatgagcagctccagagg
aagcaggtggcattggaggcaacacagaggatgaatgagagcttaggacaggaagtggaa
cagaaggcctcttgggagaaacagaaggcctcttgggaggaacagaaggcctcttgggag
gaacagaaggcctcttgggagagtgagatgctccacctgaaggaatacaaccagaagata
acctcggaaaaggagaacatggagatcagaatagaagaccttctgatccagctgatgtat
aaatacagaggattggtggattttatcttgaaagatgaagaaaagacaaagcattgggaa
cggctccagaaagaaagcaacagccagctctcctctagcttcactgaacagaagcagcac
tggaaagagcttgaacggatagtggaaatgctgaaggagaatgatgctgcagtatggaag
gaagagcaggagctaaaggctagagttgtcgctctgcaacaaaagctcatcaacatcaac
atcgactacaaccacctgcagcaagataacgacatcctgtgtggagagaacaggaggcta
aacacagaaatctgtctcctgaagaatgagaacaaggcactgaggagctccctggccaac
aaggatgtctcttcaaatgaaagagctgctgagcccgaggtccccacacctcaggttgat
gctgagcccgaggcccccacacctcaggttgatgctgagcccgaggacccctcagctcag
gctgatgttgagcccgaggtcccctctgctcaggctgatgctgagcccgaggtcccctct
gctcaggctgatgctgagcccgaggtcccctctgctcaggctgatgctgagcccgaggtc
ccctctcctcaggctgatgctgagcccgaggtcccctctcctcaggctgacgctgagccg
gaggtcccctcagctcaggctgatgctgagaccgaggtcccctctcaggctgatgctgag
ccggaggtcccctctcctcaggctgacgctgagccggaggtcccctcagctcaggctgat
gctgagcccgaggtcccctctcctcacgttgatgctgagccagaggtcccctctcctcac
attgatgctgagcccgaggccccctcagctcaggctgatgctgagcccgaggccccctca
gctcaggctgatgctgagcccgaggtcccctctcctcacgttgatgctgagcccgaggtc
ccctctgctcaggctgatgctgagcccgaggtcccctcagctcaggctgatgctgagccc
gaggccccctcagctcaggctgatgttgagcccgaggccccctcagctcaggctgatgct
gagcccgaggccccctcagctcaggttgctgagcccgaggtcccctctgctcaggctgat
gctgagcccgaggtcccctcagctcaggctgatgctgagcccgaggccccctcagctcag
gttgctgagcccgaggtcccctctgctcaggctgatgctgagccggaggtcccctctcct
caggctgatgctgagccggaggtcccctctcctcaggctgatgctgagcccgaggtcccc
ccagctcaggttgatgctgagcccgaggtcccctctcctcaggctgatgctgagcccgag
gtctcctctcctcaggctgctgctgagcccgaggtctcctctcctcaggttgatgctgag
cccgaggtctcctctcctcaggctgctgctgagcccgaggtcccctctcctcaggctgat
gctgagcccgaggtcccctctcctcaggctgatgctgagcccgaggtcccctcacctcag
gttgatgctgagtccgaggccccctcacctcaggctgctcctgaatccgaggtcccctca
cctcaggctgctcctgaatccgaggtcccctcagctcaaagagctggcagctcaaaccct
ttgctgtgggaatgtgatgaagactcatatactggtatctcaggaagttctctttacatg
gacccaagctgggagcagctggagcccaaagatttgtattgtccattctgtatgaagacc
tacagagcaacaaggagatgggtctcctgggacaactgtcccacactcatccctgcctga
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