Rattus norvegicus (rat): 303630
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Entry
303630 CDS
T01003
Symbol
Wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04136
Autophagy - other
rno04140
Autophagy - animal
rno05010
Alzheimer disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
303630 (Wipi1)
04136 Autophagy - other
303630 (Wipi1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
303630 (Wipi1)
05014 Amyotrophic lateral sclerosis
303630 (Wipi1)
05016 Huntington disease
303630 (Wipi1)
05017 Spinocerebellar ataxia
303630 (Wipi1)
05022 Pathways of neurodegeneration - multiple diseases
303630 (Wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
303630 (Wipi1)
03029 Mitochondrial biogenesis [BR:
rno03029
]
303630 (Wipi1)
Membrane trafficking [BR:
rno04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
303630 (Wipi1)
Mitochondrial biogenesis [BR:
rno03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
303630 (Wipi1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_WDHD1_1st
BCAS3_WD40
WD40_Prp19
WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_NWD2_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
EIF3I
DUF5711
WD40_Gbeta
Beta-prop_Aladin
Big_2
Motif
Other DBs
NCBI-GeneID:
303630
NCBI-ProteinID:
NP_001120769
RGD:
1307754
Ensembl:
ENSRNOG00000003827
UniProt:
A0ABK0LDB1
B2RYM2
LinkDB
All DBs
Position
10:complement(95042451..95079679)
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEAADAPPGRVEAALSCFSFNQDCTSLAIGTKTGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYCYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPSNPTGLCALSINHSNSYLAYPGSQSTGEIVLYDGNSLKMVC
TIAAHEGTLAAITFNSSGSKLASASEKGTVIRVFSVPEGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEQLTDSRPEEPSTWSGYMGKMLTAATNYLPAQVSDMMNQ
DRAFATGRLNFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTAEENKENDLRPSLPPSYAATVARPSASTASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaagctgcagatgcccctccgggccgagtggaggcggcgctcagctgcttc
tctttcaaccaagactgcacatccctagcgattggaaccaagactggttacaagctgttt
tctctgagttctgtggagcaacttgaccaagtccatggaagcaatgaaatccccgacgtg
tatattgtggagcgcctcttctccagcagcctggttgtggtggtcagtcacacaaaacct
cggcagatgaacgtctaccacttcaagaaaggcaccgagatctgtaattactgctactcc
agtaacattttgtctattcggctgaaccgacagagactgctggtctgcctggaagaatcc
atctatatccacaatattaaggacatgaagctattgaagaccctcctggatatcccttca
aacccgacaggtctctgtgccctttcaatcaaccattccaactcttacctggcctacccc
ggaagccagagtacaggcgagattgtactctatgacggaaactccctgaaaatggtgtgc
accattgctgcccacgagggaaccctggccgccatcaccttcaactcctccggctccaaa
ctagcaagtgcgtctgaaaaaggcaccgtcatccgagtgttctctgtgcccgaagggcag
aaactctatgagttccgtcgaggaatgaaaaggtatgtgacaatcagctctctggtgttc
agtatggactcccagttcctgtgtgcctccagcaacacggagaccgtgcacatcttcaag
ttggaacagctgaccgacagccgcccagaagagccttccacctggagcggctacatggga
aagatgctcacggcggctaccaactacctccccgcccaggtgtcggacatgatgaaccag
gacagggccttcgccacaggacgcctgaacttctctgggcagaagaacatttgcaccctg
tccacgatccagaaactgccgcggctgctagtagcctcctccgatggacacctctacatc
tacaatttggaccctcaggatggaggagaatgcgtcttaatcaaaacccacagcttgctg
agctcaggaacagcagaagagaacaaagaaaacgacctcagaccttccttacctccgtcg
tatgctgcaactgtagccagacccagcgcatccacagcctccaccgtgccagggtactct
gaggacggtggggcgctccgtggagaagtgattccagaacacgagtttgcaacgggccca
gtgtgtcttgacgatgagaatgagttcccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcctga
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integrated database retrieval system
