Rattus norvegicus (rat): 303637
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Entry
303637 CDS
T01003
Symbol
Abca8
Name
(RefSeq) ABC-type organic anion transporter ABCA8 isoform X1
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
rno
Rattus norvegicus (rat)
Pathway
rno02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
303637 (Abca8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
303637 (Abca8)
Transporters [BR:
rno02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
303637 (Abca8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
AAA_15
MtN3_slv
MMR_HSR1
AAA_23
Motif
Other DBs
NCBI-GeneID:
303637
NCBI-ProteinID:
XP_038943365
RGD:
1307069
Ensembl:
ENSRNOG00000004040
LinkDB
All DBs
Position
10:complement(95416984..95490647)
Genome browser
AA seq
1620 aa
AA seq
DB search
MIKREISVRQQTCALLQKNLLKKWRLRRETLMEWMSSLLLLLFLCWYPHGHEATDFSSVP
TKDLGRVDSFTQSGFMIGYTPVTSTTRQIMEKVAAVPFMAGRKVLGLLDEENIRELTESH
QEVIRVIFSDTFSYHLKFQFGQRIPKSREHGDHEAHCFEMYEDVDCLISIFWKKGFVALQ
AAINAAIIETTTNHSVMEKLLSVSGKFMKIHPFVRQEGILTDFFIFTCIVSFSPITYFVS
ISVARERKKMKGLMMMMGLRDSAFWLSWGLLYAGFVFVMALSLALVIKSVQFLILTSFTV
VFSLFLLYGLSMISLAFLMSVLVRKSVLTGLTVFLLTIFWGSLGFTALYRYLPAPLEWTL
SLFSPFAFTLGMAQLLRVDYDLNSNAPPDPAGSSNLIAATNFMLAFDALLYLALTMYFEK
VLPNEYGHQRSPLFFLKPSFWVQPRKPAHVILEDGIDPAPLSGGSFEPVSPEFHGKESIR
IRNISKEYKGKPSKIEALKDLTLDIYEGQITALLGHSGAGKSTLLNILSGLSVPTKGSVT
IYNNRLSEMADLESVFRISGVCPQSNVQFDFLTVRENLRLFAKIRGVPPQEVEKEVQRVL
LELEMKNIQDILARNLSGGQKRKLTFGTAILGDSQIFLLDEPTAGLDPFSRHRVWNLLKE
RKADRVVLFSTQFMDEADILADRKVFISRGKLKCAGSSLFLKKKWGVGYHLSLQLKEVCV
PENITSLVKQHIPEAKLSAERERTLVYTLPLETTYRFPELCQSLDSCPGLGIDSYGVSMT
TLNEVFLKLEGKSAIEEPEVDIVGEGQTERSGDTERLMEMEQTLSTLTETKKKTGSLALW
RQQTCAIAKARLLKLKHERKTLLSVLLVLGVALCPLLFESIKMKILQSAYTWDLSPHSYF
LAPGQQPHGMLTQLLIINKTEASIDDFIQSVERQNIALEVDASGARDGTDDPSFNGALTV
SGGEKNHSFSLACNTKRLNCFPVLMDVLSNGLLGMVKPSARIRTDRSTYFVDEITNPLQQ
LGKTTFWLTLTSACPPYIAMSSVTDYKNKVWFQLRVSGLFPSAYWFGQALVDIPLYCFVF
LFMSLMDYLLGFPDATLIVITHVLQIPCSVGYAISLIFLTYVISFISRKGKKNSGIWSLC
FYIITMFSVVAMLLDFNVDAILYCIIFLLPPSTLIGCLILSMHLFIYRISREESIVEPFL
VFLIPLLHVFIFIFTLRCLEWKFGKKTMRKDPIFRISPRNNDVHQNPEEPEGEDEDVQME
RMRTASALASTSFDEKPVIVASCLRKEYAGKWKHCLSKKKAKIATRNVSFCVRKGEILGL
LGHNGAGKSTSLKMISGDTKSTAGQVLLKGSREGDALGFLGYCPQENALWPNLTVKEHLE
VFATVLGLSKSHAAVTITRLADALQLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSILLL
DEPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDRVAILVSGRLRCIGS
IQHLKSKFGKDYLLEMKVKTLEQVELLNTEVLRLFPQAARQERYSPLMVYKLPVEDVQPL
SQAFFKLEKVKQTFDLEEYSLSQSTLEQVFLELSKEQEMDGFEEELDSSIKWKLLPQEEV
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagagagataagtgtgcgccaacaaacttgtgctttattacagaagaacctt
cttaagaaatggagactgagaagggagaccttgatggaatggatgagctcattgctcctt
ctgcttttcttgtgttggtatccgcatggtcatgaagctactgacttttcctcagtgccc
accaaggatctgggacgagtcgattcttttacacaatctgggttcatgatagggtataca
cctgtcaccagcacgacccgacagataatggagaaggtagctgctgtccctttcatggca
ggtagaaaagtcctgggactgttggatgaagaaaacatcagggaattaacagaaagtcat
caggaagtaataagagtcattttctctgatacgttctcatatcatctgaaatttcaattt
ggacagagaatcccaaagtcaagggaacatggagatcatgaagctcattgttttgagatg
tatgaagatgttgactgtctgatatcaatattctggaagaaaggatttgtggctcttcaa
gctgccatcaatgctgccattatagaaaccacgacaaaccattcggtgatggagaaactg
ctgtcagtttcggggaaattcatgaagatccatcctttcgtcaggcaagaggggattttg
actgatttcttcattttcacctgcatcgtttccttctccccaatcacctattttgtgtca
atcagtgttgcaagagagaggaaaaagatgaagggcttgatgatgatgatgggtcttcga
gattcagcattctggctatcctggggtctgctctatgctggctttgtcttcgtgatggcc
ctatccctggcacttgttatcaagtctgtccagtttcttattctgaccagcttcacggtg
gtctttagcctcttcctcctgtacggattgtctatgatctctttggccttcctaatgagc
gtcttggtgaggaagtctgtcctcactggcctgactgtgttccttctcaccatcttctgg
ggaagcctcggtttcacagccctgtacagatatctccctgcacctttggaatggactctc
agtctttttagccccttcgccttcacactaggaatggcccagctcttacgcgtggactat
gatttaaattctaacgcaccccctgatccagctggtagctcaaatctgattgcagcaacc
aatttcatgctggcatttgatgcgcttttgtatctggccctgacgatgtactttgaaaaa
gttctgccaaatgagtatggacaccagcggtctcccctgtttttcctgaaaccctcattt
tgggtacaaccacgaaagcctgctcacgtgattcttgaagatggaatagatcccgctcct
ttatcaggtggctcgtttgaaccggtgtccccagaattccacgggaaagaatccatcaga
atcagaaatatttcaaaagaatacaaaggaaagcccagtaaaatagaagccttgaaagac
ctgacactggacatatatgaaggccaaatcacagctttacttggtcacagtggagctggg
aagtcaacactgttaaatatccttagtggattatctgtccctaccaaaggttccgtcacc
atctataacaatagattatcagaaatggctgacctagaaagtgtgttcaggatctcagga
gtttgtccacaatccaatgttcaatttgacttccttactgtgagagaaaacctcagactt
tttgctaaaataagaggagttccaccccaagaggtggagaaagaggtgcaaagggttttg
ctggaattggaaatgaaaaatattcaagatatccttgctcgaaacctaagtggtggacag
aagagaaagctaactttcggaactgccattttaggagattctcagattttcctactggat
gagcccactgctgggctggatcccttttcaaggcaccgggtgtggaatctcctgaaggag
cgcaaagcagaccgtgtggtcctcttcagcacgcagttcatggatgaagctgacattctg
gctgacaggaaagtgttcatctccagggggaagctgaagtgtgcaggctcatctctcttc
ctgaagaagaaatggggcgttgggtatcacttaagtttgcagctgaaggaagtctgtgtt
ccggagaacatcacatcactggtgaaacagcacatccctgaggccaagctgtcagctgaa
agggagaggacacttgtctatacattacccttagaaacaacctatagatttccagaactt
tgccagagtcttgacagctgtcctggactgggaattgatagctatggtgtttccatgacg
actttgaatgaggtgttcctgaagctagaaggaaaatcagcaattgaagaaccagaggtt
gacatagtgggagaaggacaaacagagagatctggggacacagagagactcatggagatg
gagcagactctctctacacttacggagacgaagaagaagacaggcagcttggctctctgg
agacagcaaacctgtgcaatcgcaaaggctcgcttgttgaagttaaagcatgaaaggaaa
acacttctctctgtgctcttggttctgggagttgccctttgccctcttcttttcgaaagt
atcaagatgaaaatacttcagagcgcttacacttgggatctttccccacactcgtacttc
cttgcccctggacaacagccccacggcatgctcactcagttactgatcatcaataagaca
gaggcaagcattgatgactttatccagtctgtggagcgccagaacatagctttggaagtc
gatgcttccggagccagagatggcacggatgacccatccttcaacggagcccttacagtg
tctggcggtgagaagaaccacagcttttcactggcatgcaataccaagagattgaactgt
ttcccagttctgatggacgtcctaagcaatgggttactgggaatggttaaaccatcagcc
cgcatccgaaccgacagaagcacctacttcgtggatgaaattactaatcctttacaacag
ctggggaagaccacgttctggctgactctgacctcggcttgccctccttatatagccatg
agcagcgtcacagactataagaacaaagtgtggttccagctgcgggtctccggcctcttc
ccttccgcttactggttcgggcaggcactggtggatattccgctctactgcttcgtcttc
ctcttcatgtctttaatggactacctcttaggcttcccagatgccacgcttattgttata
actcacgttctacaaatcccgtgttctgtcggctatgccatatccctgatcttcttaaca
tacgtgatttccttcatttctcgcaaggggaaaaaaaacagcggcatttggtcactttgc
ttctatatcatcaccatgttctcggtggttgcaatgttgctggatttcaatgtggatgct
atactgtactgcatcatctttttactaccgccgtccactctgattggatgtctgatctta
tctatgcatcttttcatatatcggatctctcgtgaagaatcaattgtagagccatttctg
gtattcctcattcctttacttcatgttttcatttttatttttacccttcgatgtctggaa
tggaagtttggaaagaaaacaatgaggaaggatcccatttttagaatctctccaagaaac
aatgatgtgcatcaaaacccagaagagccagaaggtgaggatgaagatgttcaaatggag
agaatgagaacagcgagtgccttggcatccaccagttttgatgagaagccagtcattgtt
gccagctgcctacgcaaagagtacgcagggaaatggaaacattgcctttctaagaagaag
gctaagatagccaccaggaatgtctcattctgtgtcaggaaaggtgagattctaggattg
ctgggacacaatggagctggcaaaagtacatctcttaaaatgataagtggagacacaaaa
tccacagctgggcaggtgctactgaaagggagcagagaaggggacgccctggggttcctg
gggtactgtcctcaagagaacgctctgtggcccaacctcactgtgaaggagcacctggag
gtatttgctacagtgttgggcctgagcaaaagtcacgctgcagtcaccattacaaggttg
gcagatgcgctccagctgcaggaccagctgaagtctccggtgaagacactgtcagaggga
gtgaagagaaagctgtgttttgtgctgagcatcctgggaaacccttctatattgcttctg
gatgagccttcaactgggctggatcctgaagggcaacagcaaatatggcaagcaatcagg
gccatcataaaaaatacagacaggggcgcccttctcaccacccattacatggcagaggct
gaggctctgtgtgaccgcgtggccattctggtgtctggaaggttgaggtgtattggatca
atccaacatctcaaaagcaaattcggcaaagattacctgctggagatgaaggtgaagact
ctcgagcaggtggagctcctcaacacagaggtcctaaggcttttcccccaggctgctagg
caggaaaggtactctcctctcatggtttacaaattaccagtggaagatgtgcaaccttta
tcccaagcgttcttcaagttagagaaggttaagcagacttttgacttggaagagtatagc
ctctctcagtctaccttggagcaggtcttcttagagctctccaaggagcaagagatggat
ggctttgaggaagaactagactcctctataaaatggaagctcctcccacaggaagaggtt
taa
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