Rattus norvegicus (rat): 303639
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Entry
303639 CDS
T01003
Symbol
Abca6
Name
(RefSeq) ATP-binding cassette sub-family A member 6 isoform X2
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
303639 (Abca6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
303639 (Abca6)
Transporters [BR:
rno02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
303639 (Abca6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
RsgA_GTPase
nSTAND1
AAA_29
TMEM240
UBD
Motif
Other DBs
NCBI-GeneID:
303639
NCBI-ProteinID:
XP_002727881
RGD:
1308998
Ensembl:
ENSRNOG00000046890
UniProt:
M0R890
LinkDB
All DBs
Position
10:complement(95642026..95711535)
Genome browser
AA seq
1627 aa
AA seq
DB search
MGSMKELSVRQQTRVLLHKNLLKKWRMKRESLLEWSIPVVIGLYMGLFSYFKENNQVPEV
PPQDLGSIDEFNGSSIMVVYTPISNVTQQIMNKTITAPTMKGTRIVGVPSEKDLDEMLLD
HVPRAFGIVFNDTFFYKLKVYLMYGNPFLKEDLLAHCWDTYPHVFCSLTRYWKRGFVALQ
TAINAAIIEVTTKHPVMEELMSVNAFNMKTLPFISKDIFQYEIFILFCLLYFSSFIYFAS
RSVTKERKHSKEFMKVMGLQDSAFWLSWGLIYVGFIFIFSVFIAVIITSTRIIVMTGFLV
IFTLFFLYGLSVIAVTFLMAVLLQKAIITNLFVFLFNLFWGCVGFTVLHKELPSSLEWVL
SICSPFAFTSGMTKIIFLEYNLNGVVFPDPSGESYVMIAVFFILAFDGLLYLVLALYFDK
ILPCGADRRAAPLFFLNPVSCFRKRTSRNKVTERDIDPELPSDEYFEPVDPEYQGKEAIR
IRNIRKEYKGKSGKVEALKGLFFDVYESQITAVLGHGGAGKSSLLNILNGLSVPTSGLAT
VYNKNLSEMQDLKEIRKMIGVCPQHNVQFDALTVKENLTLFANIKGIVPQSVAQEVQQIL
SELDMQTIQDELAEHLSEGQKRKLTFGVAILGDPRILLLDEPTAGLDPFSRQRVWGFLKE
RRADRVILFSTQFTDEADILADRKVILSNGALKCTGSSVFLKRKWGLGYHLSLFMNETCD
SEQLTSFINHHIPGAKLKAKTKEKLVYTLPLEKTSKFPEFFSDLDKYSGQGLMNYEVSMS
TLNEVFMNLEGEPSTTQDFEKGETLTDSDSLNEMEVAPPSLSKAQKTMSAMSLWRMQVCA
IARLRVLKLRRERKAFLTFLPLLGISLIPLITEYMANALIEVKTNWEFKTDLYFLSPGQL
PQGLRTSLLVINNTESNIEDFVQSLKHQNIVLEVDDFENRNATESLSYNGAIIVSGRQKD
YRFSAVCNTKRLHCFPILMNVISNGILRMLNHTQHIRLEEDVLSSGIVVVWFGILEASLS
ILFIVCSVSPHIAMSSISDFKKKADSQLWISGLYPSAYWCGQALVDITLLSGILLTGYIT
LYTTKLMHIYLTGEIVLSIVLLAFGCAASLVFLTYVISFVFGKKRKNSGLWSICFFIVIT
IMFDTVLMDPFNEALLISAMMLVPSFSLNALLIVLEMRAYQYYREFGESKYGLSGVDLLL
CLIPYFHTLLFIFVLRCLELKYGKNVVRKDPLFRIAPQSLHVQPNPEEPVDEDEDVQAER
MRTSDALSTVNLDEKPAIIASCLHKEYTGQKKWCCSKRRKKIAVRNISFCVNKGEILGLL
GPEGAGKSSSLRMIAGIMKPTAGEVELKELSSAVAHQGEGHGAAKLGYCPQENVLWPILT
VKEHLEVYAAVKGLRKKDAVIAISRLVNAFKLHDQLNVQARNLVVGLTRKLCFALSILGN
SPVLILDEPSTGLDVSGKQQMWQAIQAAVKDNKKGVLLSTHDLAEAEALCDRAAIMVSGR
LRLIGSIQHLKRRFGKDYILELRVKEISQEPLVHKEILRLFPQAARQDRCFSLLTYKLPV
TDVHPLSQAFHKLEAVKRGFNLDDYSLSQCTLDRVFLELSKEQELGDVHEEADITMRWKL
LPPSDEL
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggggagtatgaaggagttgagtgtgcgtcagcagacccgagtgcttctgcacaagaat
ctgctcaagaaatggcggatgaagagagagagcctattggagtggagcataccggttgtt
ataggactgtatatgggtctgttttcctatttcaaagaaaacaatcaggtcccggaagtc
cctcctcaggatcttggaagcatagatgaattcaatggctcttctataatggttgtatat
actccaatctctaatgtaacccaacaaataatgaacaaaaccataactgctccaactatg
aaaggaacaagaattgtcggggtaccaagtgaaaaggacttggatgaaatgcttctggat
catgtgccacgagcttttggaatcgtatttaatgacactttcttttacaagttaaaagtg
tatctaatgtatggaaatccatttctgaaagaggacctactagctcattgctgggataca
tatcctcacgttttctgttcactgaccagatactggaaaagaggatttgtggccttacaa
actgccattaacgcggccattatagaagtcacaacaaagcaccctgtgatggaggagtta
atgtccgtcaacgcgttcaatatgaagaccttaccttttatttctaaagacatttttcaa
tatgaaatttttatcttgttctgcttgctctatttctcctcgttcatctattttgcgtca
cgcagcgttactaaagagagaaagcactctaaggagttcatgaaagtaatgggtctacaa
gactctgcattctggctgtcctggggcttaatctatgttggcttcatctttattttttct
gtattcatcgccgttatcataacatctacccggatcatagtgatgactggtttcctcgtc
atatttacactgttcttcttgtatggactatccgtgatagctgtaactttcctgatggct
gttctgttacagaaagcgatcatcaccaacctatttgtatttctctttaacctcttttgg
gggtgtgtggggttcacggtgctgcacaaagagctcccctcatctctggaatgggtcctg
agcatctgtagcccttttgccttcacatccgggatgaccaagattatcttcctggagtac
aacttgaatggtgtcgtatttcctgacccttccggagaatcatatgtaatgatagcagta
tttttcatattggcttttgatggtcttctctacttggttttggccttgtattttgacaaa
atcttgccctgtggggctgatcgccgggccgctccactgtttttcttgaatccggtgtct
tgttttcgaaaaaggaccagtagaaacaaggtcactgagagagacatagaccccgagctt
ccttcggatgagtattttgagcccgtggatccagaataccaagggaaagaagccatcaga
ataagaaatattagaaaggaatataaagggaagtctgggaaagtggaggctttgaaaggc
ttgttcttcgatgtctatgagagtcaaatcacagcagttctgggccatggtggagcaggc
aaatcttcattgctaaacatcctcaatggactgtctgttccaacttcagggttagccacg
gtgtacaataaaaatctctctgagatgcaagacttgaaggaaatcagaaagatgattggt
gtttgtcctcaacataatgtgcaatttgatgcgctcactgtgaaggagaaccttaccctc
ttcgctaatataaaagggatcgttccgcagagcgtagcgcaagaggtacaacaaatcctg
tcggagttggacatgcagacgatccaggatgaactggctgaacatttaagtgaaggacag
aaaagaaagctcacctttggcgtggccattctaggagaccctcgcattttgctcttagat
gaacctactgcgggactcgatcccttctcaaggcagcgagtgtggggtttcctgaaggaa
cgcagggcggaccgcgtgatcctcttcagtacgcagttcaccgacgaggcagacatcctt
gctgacaggaaagtgatcctctccaacggggctctcaagtgtacagggtcttccgtcttc
ctgaagagaaagtggggtcttggatatcacttaagtttgttcatgaatgaaacgtgcgat
tcagagcagttaacatccttcatcaatcaccacatccccggtgctaaactaaaagcaaaa
accaaagaaaagcttgtgtacactttgccactggaaaagacaagcaagttcccagagttc
ttcagtgatctcgataaatattctggccagggcttgatgaattatgaagtctccatgtca
actctgaatgaagtcttcatgaacctggaaggagaaccaagtaccacacaggactttgag
aaaggggagaccctcacagactctgacagcttaaatgaaatggaggtggctcccccttcc
ctctctaaagcccagaagaccatgagcgctatgagcctgtggagaatgcaggtctgtgcc
atagcacggcttcgcgtcctaaaactacggcgagagaggaaagcatttctaacctttcta
ccgcttcttggaatttcattgatcccactgattacggaatacatggctaatgctttgata
gaggtaaaaaccaactgggaatttaaaacagacttgtatttcctgtctcccggacaactc
cctcagggcctgcgaaccagtctattggtcatcaataacacagagtcaaatattgaagat
ttcgtgcagtcgctgaagcatcaaaacatagttttggaagtagatgactttgagaacaga
aacgccactgagagcctttcctacaacggagccattatagtttccggaagacaaaaggac
tacagattttcagctgtgtgtaacaccaagaggctacactgctttcccatattgatgaat
gttatcagcaatggaatccttcgcatgctcaatcatacacagcacatcaggcttgaggaa
gatgtactctcatcaggcatcgtggtggtctggtttgggatactggaagcttccctgtcc
attctgtttattgtgtgcagtgtttctccacatatcgccatgagtagcatcagtgatttt
aaaaagaaagctgactcccagctgtggatttctggcctctacccttctgcctactggtgt
gggcaggcgctcgtggacattactcttctcagtggaattcttctcacgggctacatcacg
ttatacacgacaaaactgatgcacatctacttgacaggcgaaatcgtgctgtctatagtc
cttctcgcttttggctgtgcagcttctcttgtcttcttgacgtacgtgatatcatttgtt
tttggcaaaaagaggaaaaacagcggcctctggtcaatttgcttctttattgtcataacg
attatgtttgacacggttttgatggatcccttcaatgaggcactgcttatttctgccatg
atgttagttccttccttttcattgaatgcgctcctgattgtcttggaaatgagagcctac
cagtactatcgagaatttggagaaagcaaatatggtttatcgggggttgatcttctctta
tgcctaataccttacttccatactttgctgttcatttttgttctgagatgcctggaactg
aagtatgggaagaatgtagtacggaaggaccccctcttcaggatagctccgcagagtcta
catgttcagccaaacccagaggagcccgtagacgaagacgaagacgttcaagcagaaaga
atgaggacatctgatgccctgagcaccgtgaatttagatgagaaaccggccataatcgcc
agctgtctgcacaaagagtacacaggtcagaagaaatggtgttgttcaaagaggagaaag
aaaatagcagtgaggaacatctctttctgcgttaataaaggtgaaattttgggattgtta
ggacccgagggcgctggtaaaagttcctctctcaggatgatagctggcatcatgaagccg
acagctggagaggtggaactgaaagagttaagctcagctgtggctcaccagggcgagggc
catggtgcagccaagctcggatactgccctcaggagaacgtactgtggcccatcctgacc
gtgaaggaacacctggaggtgtacgccgctgtgaaggggctgaggaagaaggatgctgtc
attgccatttcaagattagtgaatgctttcaaactacacgaccagctgaatgtccaagcg
cggaacctagttgtggggttgactagaaagctgtgcttcgcgctgagcatcctgggaaac
tcacctgtcctgattctggatgaaccatctacaggcttagatgtgtcagggaagcaacaa
atgtggcaggcaatccaggcagccgttaaagacaacaagaagggtgtcctcttgtctacc
catgacctggctgaggcagaggctctgtgtgaccgagcggccatcatggtgtctggaagg
ctgagactcatcggttcaatccaacacctcaagaggagatttggcaaggattacattcta
gaactcagagtgaaggaaatttctcaagagccattagttcacaaggagattctgaggctg
ttcccccaggctgcacgccaggacaggtgcttctccttgctcacctacaagcttcccgtg
acagatgttcatcctctgtctcaggcctttcacaaactggaagcagtgaagcgtggcttt
aacctggacgactacagcctctctcagtgcacattggacagagtatttttagagctttcg
aaggaacaggagctgggagatgttcatgaagaagctgatataaccatgagatggaaactc
ctccctccctcagatgaactgtaa
DBGET
integrated database retrieval system
