Rattus norvegicus (rat): 303798
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Entry
303798 CDS
T01003
Symbol
Arvcf
Name
(RefSeq) splicing regulator ARVCF
KO
K28154
splicing regulator ARVCF
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
303798 (Arvcf)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
303798 (Arvcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
HEAT_2
ARMC9_ARM
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
303798
NCBI-ProteinID:
NP_001124485
RGD:
1306655
Ensembl:
ENSRNOG00000001888
UniProt:
B4F7F3
LinkDB
All DBs
Position
11:complement(96092451..96150144)
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AA seq
973 aa
AA seq
DB search
MEDCNVHSAASILASVKEQEARFERLTRALEQERRHVALQLERAQQPGMSSGGMVGSGQP
LPMAWQQLVLQEQSPGSQASLATMPEAPEVLEETVTVEEDPGTPTSHVSIVTSEDGTTRR
TETKVTKTVKTVTTRTVRQVPLGPDGLPLLDGGPPLGSFADGPLDRHYVLRGGGPAATLS
RAYLSSGGGFPDGPEPRDIPSYGSLSRGLGVRPPRTGLLGPGPGDGCFTLPGRREAFPMG
SESGPPSGRSLPEHFQAEPYGLEDDTRSLAADDEGGPDLEPDYSTATRRRPEYGRGLRAR
ALEDTADDTGELVEERPPFPAATAPLAQPERGSLGSLDRVVRRSPSVDSTRKEPRWRDPE
LPEVLAMLRHPVDPVKANAAAYLQHLCFENEGIKRRVRQLRGLPLLVALLDHPRAEVRRR
ACGALRNLSYGRDADNKAAIRDCGGVPALVRLLRAARDNEVRELVTGTLWNLSSYEPLKM
VIIDHGLQTLTHEVIVPHSGWEREPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRR
LRECEGLVDALLHALQSAVGRKDTDNKSVENCVCIMRNLSYHVHKEVPGADRYQEVEPGI
PGSAATSQRRRKDDASCFGGKKAKGKKDAEADRNFDTLDLPKRTEAAKGFELLYQPEVVR
LYLSLLTESRNFNTLEAAAGALQNLSAGNWMWATYIRATVRKERGLPVLVELLQSETDKV
VRAVAIALRNLSLDQRNKDLIGSYAMTELVRNVRNAQAPAHPSAHLEEDTVVAVLNTIHE
IVSDSLDNARSLLQARGVPALVALVASSQSVREAKAASHVLQTVWSYKELRGALQRDGWT
KAHFQSASTAKGPKGTPNSGGFDDSTLPLVDKNLDGEKSTTRDVIPMDTLGPDGYSTVDR
RERRTLGSDSIGDSSEKELLKGPGPAVCSSDHMEVIGRGPSGTDPVLGPGAPPFCVGLAK
PLVYLALPSSLLS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaggactgcaatgtgcattcggccgccagcattctggcctcggtgaaagaacaggag
gcccgattcgagcggctgacacgggcactagagcaagaacggcgccacgtcgccctgcag
ctggagcgtgcccagcagcctggcatgagcagtggtggtatggtgggcagtgggcagccc
ctgccaatggcctggcagcagctggttctgcaggaacagagcccgggtagccaggcatcg
ctggccacgatgccagaggcacctgaggtgctggaggagacagtgactgtggaggaagac
cctggcacccccacctctcatgtatccattgtcacatcagaagacggtacaacccggcgg
actgagactaaggtcactaagacagtcaagactgtgaccacaaggacagtccgccaggtg
cctttgggtccagatggactccccttgctagatggcggccctcctcttggctcttttgct
gatgggcccctggaccggcactacgtcctgcgtggtggtggcccagcagccacactctcc
cgagcctacctcagcagtggaggtggctttcccgatggccccgagccccgtgatattcca
agctacggcagcttgtcccgagggcttggggtacggccaccacgtactggcctcttgggc
ccgggacctggtgatggctgtttcacactccctggccgccgagaagccttccccatgggc
tcagaatctggaccaccaagtggccgctctctgcctgagcatttccaagcagagccatat
ggcctggaggatgacactcggagcctggctgcagatgatgagggcggccccgacctggag
cctgactacagcacagccacacggagaagacctgagtacgggcggggcctccgtgccagg
gccttggaagacaccgcagatgacactggtgagctggtagaagagcggcccccgttccca
gccgcaacagcccctctagcccagcctgagaggggcagcctgggcagcttggaccgagta
gtgcggcgctcaccctcagtagacagcacccgcaaggagccgcgctggagggaccctgag
ctgcccgaggtgctggccatgctgcggcaccccgtggaccctgtgaaagccaacgccgca
gcctacctgcagcacctctgctttgagaacgagggcatcaagcgtcgggtgcggcagctg
cgtgggctgcccctactcgtggcgttactagatcaccctcgggctgaggtgcgccgccgg
gcctgcggggcactgcgcaacctctcctatggccgcgatgccgacaacaaggctgccatc
cgggactgcgggggcgtgccagccctggtgcgcctgctgcgggctgcccgtgacaatgag
gtccgtgagctggtcactggcacactctggaacctgtcatcctacgagcccctgaagatg
gtcatcattgaccacggcttacagactctgacccatgaggtcatcgtgccccattctggc
tgggagcgagagcctaatgaagactcgaagccccgggatgccgagtggacgacagtcttt
aagaacacatcaggctgcctgaggaacgtgagctcagatggtgcagaggcccggcggcga
cttcgtgagtgcgaagggctggtggacgctctcttacatgccctgcagtcagctgtgggc
aggaaagacacagataataagtcagtagagaactgtgtgtgcatcatgcggaacctgtcc
taccacgtgcacaaggaagttccaggggctgacaggtaccaggaggtggagcctgggatc
ccgggcagtgctgcaacctcccagcgtcggaggaaggatgacgccagctgctttggtggc
aagaaagcgaaagggaagaaggatgcagaggccgaccggaactttgacacattggacctg
cccaaacgtactgaagctgcgaaaggcttcgagctgctgtaccagccggaggtggtgcga
ctttacctgtcactccttacggagagccggaacttcaacaccctagaagctgcagcgggt
gccctgcagaacctcagtgctggcaactggatgtgggccacgtatatccgtgccacagtg
cgcaaggaacgtgggctgccagtgctggtggaactgctacagtctgagaccgacaaggtg
gtgcgtgctgtggccatcgcactgcgcaacctgtcactagaccagcggaacaaagacctc
atcgggagctacgccatgacagagctggttcggaatgttcgcaacgcacaggctcctgcc
caccccagtgcccacctggaggaggatacagtggtagctgtgctcaacaccatccatgag
attgtgtccgacagcctggacaatgctcgctccctcctgcaggcccgtggtgtgcctgca
ctggtggcacttgtggcctccagccagtcagtgcgggaggccaaggcagcatcacacgtg
ctacagactgtgtggagctacaaggagctgcgtggagccctacagagggacggctggacg
aaagcacacttccagtctgctagcactgccaaaggacccaaagggacaccaaattctgga
ggctttgatgacagcacactgccactggtagacaagaaccttgatggggagaagtcaact
actcgggatgtgatccccatggatacccttggtccagatggctacagcacagttgaccgg
agggagaggaggacactgggcagcgactccataggcgactcctctgagaaggaactactg
aaaggccctggcccagctgtttgttcttcggatcacatggaggtaattggaagagggccg
tctggaacagacccagtcttggggccaggagccccacccttctgtgttgggttggccaag
cctcttgtctaccttgccctgccctcctctctactctcctga
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