Rattus norvegicus (rat): 303968
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Entry
303968 CDS
T01003
Symbol
Ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05016
Huntington disease
rno05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
303968 (Ift57)
05022 Pathways of neurodegeneration - multiple diseases
303968 (Ift57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
303968 (Ift57)
Cilium and associated proteins [BR:
rno03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
303968 (Ift57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
Mod_r
MCPsignal
DUF745
Motif
Other DBs
NCBI-GeneID:
303968
NCBI-ProteinID:
NP_001100563
RGD:
1305947
Ensembl:
ENSRNOG00000001958
UniProt:
D4A1V1
A6IQU7
LinkDB
All DBs
Position
11:complement(64528349..64593545)
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AA seq
429 aa
AA seq
DB search
MAAAAAVIPPSGLDDGVSRARGEGAGEAVVERGPGAAYHMFVVMEDLVEKLKLLRYEEEL
LRKSNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKTGRAFEQPQEYDDPNATISNILS
ELRSFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYIGFTWKRPSYPVEELEEETVPE
DDAELTLSKVDEEFVEEETDNEENFIDLNVLKAQTYRLDTNESAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRGAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGTPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKCNMTRDMHAAV
TPESAIGFY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcggccgcggtgatcccgccgtcgggcttggacgatggggtgtctcgggct
cgcggggaaggcgctggggaggcggtggtggagcgcgggccgggagcggcctaccacatg
ttcgtggtgatggaagacttagtggagaagctgaagctgctccgctacgaggaggagcta
ctccgaaagagcaatctgaagcccccgtccagacactactttgctctgcctaccaatccc
ggtgagcagttctacatgttttgcactcttgctgcctggctgatcaacaagactggccgt
gcctttgagcagcctcaggaatatgacgatcccaatgcaactatatctaacatcctgtct
gagctccgctcttttgggagaactgcagattttcctccttcaaaattaaagtctggttat
ggagaacatgtatgctatgttcttgattgtttagctgaagaagcattaaaatatattggt
ttcacttggaaaaggccatcatacccagtggaagagttagaagaagaaactgttccggaa
gatgatgcggagttaacattaagtaaagtggatgaagagtttgtggaagaggagacagat
aatgaagaaaactttattgatctcaacgttttaaaggcccagacctatcgcttggacaca
aacgagtctgccaaacaagaagatattttggaatctacgacagatgctgcggaatggagt
ctagaagtggaacgtgtactaccccagctgaaagtcacgatcaggactgacaacaaggat
tggagaatccacgttgaccaaatgcaccagcacaaaagtggaattgaatctgctctaaag
gagaccaaggggttcttggacaagctccataatgaaattagcaggactctggaaaagatc
ggcagccgggaaaagtacattaacaatcaacttgagcacttggttcaagaatatcgtggg
gcccaggcccagctaagtgaggcaagggaacgctaccagcagggcaatggcggagtaact
gaacggaccagactcctgtctgaggtgacagaagaattagaaaaggtaaaacaagaaatg
gaagagaagggcagcagcatgacggatggcactcctttggtgaagattaagcagagctta
accaagctgaagcaagaaactgttcagatggacattagaatcggggttgtggagcacacg
ctgcttcagtcaaagctcaaggagaagtgtaacatgaccagagacatgcatgcggctgtc
accccagagtcagcaatcggcttctattaa
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