Rattus norvegicus (rat): 304277
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Entry
304277 CDS
T01003
Symbol
Cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform 1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03015
mRNA surveillance pathway
rno05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
304277 (Cpsf4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
304277 (Cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
304277 (Cpsf4)
03019 Messenger RNA biogenesis [BR:
rno03019
]
304277 (Cpsf4)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
304277 (Cpsf4)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
304277 (Cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
304277
NCBI-ProteinID:
NP_001012351
RGD:
620440
Ensembl:
ENSRNOG00000000985
Vega:
OTTRNOG00000000688
UniProt:
Q5FVR7
LinkDB
All DBs
Position
12:complement(14543536..14559350)
Genome browser
AA seq
243 aa
AA seq
DB search
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKRAPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaataatcgccagcgtggatcacatcaagttcgacttggaaatcgccgtggag
cagcagctcggggcgcagccgctgcccttccccggcatggataagtcgggggctgctgtc
tgtgaattctttttgaaagcggcctgtggcaaagggggcatgtgcccattccgccacatt
agtggcgagaagacagttgtgtgcaaacactggctgagaggactgtgcaagaaaggggac
cagtgtgagttcttgcacgaatacgacatgaccaagatgccagagtgctacttttactcc
aagttcggggagtgcagcaacaaggagtgccccttcctgcacatcgaccctgaatccaag
ataaaggactgcccttggtatgaccgtggcttctgtaagcatggtcccctttgcaggcat
cggcacacccggagagtcatttgtgtgaactaccttgttggattctgccctgagggacca
tcatgtaaattcatgcaccctcgatttgaactgcccatgggaaccactgaacaaccccca
ctaccacagcagacacagcctccaacaaagagagccccgcaggtcattggggtcatgcag
agtcaaaacagcagtgcaggcaaccggggaccccggccgctggagcaagtcacttgctac
aagtgtggtgaaaaaggacactacgccaacagatgcaccaaagggcacttggcctttctc
agtggacagtga
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integrated database retrieval system