Rattus norvegicus (rat): 304378
Help
Entry
304378 CDS
T01003
Symbol
Gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
304378 (Gigyf1)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
304378 (Gigyf1)
Surveillance factors
Other surveillance factors
304378 (Gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
PRTase_3
Motif
Other DBs
NCBI-GeneID:
304378
NCBI-ProteinID:
NP_001100603
RGD:
1309933
Ensembl:
ENSRNOG00000001410
UniProt:
A6J025
D3ZQJ3
LinkDB
All DBs
Position
12:complement(24800996..24819719)
Genome browser
AA seq
1042 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKENKVPEEL
QDKEFAAVLQEEPLQPLALEPLTEDEQRNFSLSVNSVAVLRLMGKGAGPPLAATSRGRGS
TRSRGRGRGDSCFYQRSIEEGDGAFGRNPREIQRSQSWDDRGERRFEKSARRDGVRSGFE
EGGAGPRKEHARSDSENWRSLREEQEDDSSWRLGAGPRRDGDRWRSTSPDGGPRSAGWRE
HGERRRKFDFDLRGERGGCGEEDGRVGGGNSHLRRCRGLDGFEDDKDGLPEWCLDDEDEE
MGTFDASGAFLPLKKGPKEPIPEEQELDFQGLEEEEEEPSDGVDEEGPEAGGKEVTPLPP
SEKSSSPSSLPALGPLWTANEDGEAVEKELPPAEGDEMRGLPLSPRISSPPAGPPADLED
EEGLKHLQQEAEKLVASLQDSSLEEEQFTAAMQTQGLRHSTAATALPLSHGAARKWFYKD
PQGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPP
LLGNMDQERLKKQQELAAAALYQQLQHQHFLQLVGSRQLPQCATLREKAAMGDLTPPQQQ
LTTFLQQLQALKTPRGGDQNLLPTMSRSLSVPDSGPLWDLHTSASSQSGGEASLWDIPIN
SSTQGPILEQLQLQHKFQERREVELRVKREEEERKRREEKRRQQQQQEEQKRRQEEEELF
RRKQVRQQELLLKLLQQQQATNVPVPPAPSSPPPLWAGLAKQGLSMKTLLELQMESERQL
HKQPAPREPLRAQAPNHRVQLGGLGTAPLNQWVSEAGPLWGGPDKSGGSSSGNLGLWEDT
LKSGGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDGFTQ
WCEQMLHTLSTTSSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERRAK
QKASQQRQQQQQQQQQQQQQQQEAWLSSSSLQTAFQANHSTKLGPGEGSKAKRRALMLHS
DPSILGYSLHGPSGEIESVDDY
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagacactcaactttgggcctgagtggctgagagccctttccagcggtggc
agcgtggcctctccacccccatcccctgccatgcccaagtacaagctggcagattaccgc
tatgggcgagaggagatgctggccctctatgtcaaggagaacaaggttcccgaggaacta
caggacaaggagtttgctgcagtgttacaggaggagccgctgcagcccctggctctggag
cctctcactgaggatgagcagagaaacttctccctgtcggtgaacagtgtggctgtgctg
aggctgatgggaaaaggggctgggccccctttggctgccacctcccgtggcaggggcagc
actcggagccgagggcgaggccgtggtgacagctgcttttaccaaagaagcattgaggaa
ggcgatggggcctttggacgcaatcctcgggagatccagcgaagccagagctgggacgac
agaggtgagaggcggtttgagaagtctgcaaggagggatggagtacgatctggctttgag
gagggaggggctggcccgaggaaggagcatgcgcgctcagacagtgagaattggcgctca
cttcgagaggagcaagaggatgatagcagctggagacttggggcaggaccccggcgagat
ggtgatcgctggcgttccaccagtcctgacggtggtccccgctctgctggctggcgggag
catggagagcggaggcgcaagtttgattttgatttgcgaggggaacgcggaggttgtggt
gaagaagatgggcgagttgggggaggcaactcacacctccgaagatgccgggggctggat
ggctttgaagatgacaaggatgggctcccagagtggtgcctggatgatgaggatgaggag
atgggtacttttgatgcttctggagccttcctgcctcttaagaagggccccaaggaacct
attccagaggagcaagagcttgatttccagggcctggaggaagaggaagaggaaccatca
gatggggtggatgaagaggggcctgaggccggagggaaggaagtgaccccattgcctcct
tcagagaagtcgagctccccatcctcactgcctgccttgggccctctctggacagcgaat
gaagatggtgaggcagtggagaaagagctgcccccggctgaaggagacgagatgagggga
ctgcctctaagtccaagaatcagttcccctcctgcaggcccgcctgcagacctagaagat
gaagaaggcttgaagcacttgcaacaggaggcagagaagctggtggcctccctgcaggac
agctccctggaggaggagcagttcactgctgccatgcagacccagggcctacgccactcc
acagccgccactgcccttcccctcagccatggcgctgcccgaaagtggttctacaaggac
ccacagggagagatccaaggccctttcacaacccaggagatggctgagtggttccaggct
ggctacttctccatgtccctcttagtgaagaggggctgcgatgagggtttccagcctctg
ggagaggtgatcaagatgtggggccgtgtgccctttgccccagggccctcgccacccccg
ctgctggggaacatggatcaggagcggctgaagaagcagcaggagctggctgcggcagcc
ctgtaccagcagctgcagcaccagcactttctgcagctggttggcagccgccagctcccg
cagtgtgcgacactccgggaaaaggcagctatgggggacctgacgccgccgcagcagcag
ctcactacgttcctgcagcagctccaggctctcaaaacccccagaggtggggaccagaac
ctgctcccgacaatgagccggtccttgtcggtgccagattcaggccccctctgggactta
catacctcagcttcatcacagtcaggtggtgaggccagtctttgggacataccaattaac
tcttcgactcagggtccaattctagaacaactccagctgcaacacaaatttcaagaacgc
agagaagtggagctcagggtgaagcgggaggaggaggagcgcaaacgccgggaggagaag
cgtcgccagcagcagcagcaggaggagcagaagcggcgtcaggaggaggaggagctcttt
cgacgcaagcaggtgcggcagcaggaactgttgctgaagctgctacagcagcagcaggcg
acgaatgtccctgtgccccctgcacccagctccccacccccactctgggctggcctagcc
aagcagggcctgtccatgaagactctgctggagctgcagatggaaagtgagcgccaactg
cacaagcagccggcaccacgggagcctctgcgggcccaggcccccaaccaccgagtgcaa
cttgggggcttgggcactgcccctctgaaccagtgggtgtctgaggctgggccactgtgg
ggcgggccagacaagagtgggggcagcagcagtggcaacctgggactctgggaagacact
ctcaagagtggcgggagcctggcccgaagcctgggcctaaagaacagtcggagcagcccg
tctctcagtgactcctacagccacctgtcaggtcgacctgttcgcaaaaagaccgaagag
gaagagaagttgctgaagctgctacagggcatccctcggccccaggatggcttcacccaa
tggtgtgagcagatgctgcacactctgagcaccacaagcagcctggatgttcccatggct
gtagcgatcctcaaggaggtggagtccccttatgatgtccatgattatattcgttcctgc
ctgggggacacgctggaagccaaagaatttgccaaacaattcctggagcggagggccaag
cagaaagccagccaacagcggcagcagcaacagcagcagcagcagcagcagcaacagcag
cagcaggaggcctggctgagcagcagctccctacagacagcctttcaggccaaccacagc
accaaactgggccctggggagggcagcaaggccaagaggcgggcgctgatgcttcactct
gaccccagcatcttggggtactccctgcacggcccttccggtgagatcgagagcgtggat
gactactga
DBGET
integrated database retrieval system