Rattus norvegicus (rat): 304528
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Entry
304528 CDS
T01003
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03030
DNA replication
rno03410
Base excision repair
rno03420
Nucleotide excision repair
rno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
304528 (Rfc5)
03410 Base excision repair
304528 (Rfc5)
03420 Nucleotide excision repair
304528 (Rfc5)
03430 Mismatch repair
304528 (Rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rno03032
]
304528 (Rfc5)
03036 Chromosome and associated proteins [BR:
rno03036
]
304528 (Rfc5)
03400 DNA repair and recombination proteins [BR:
rno03400
]
304528 (Rfc5)
DNA replication proteins [BR:
rno03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
304528 (Rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
304528 (Rfc5)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
304528 (Rfc5)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
304528 (Rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
304528 (Rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_24
AAA_22
AAA_16
AAA_assoc_2
RuvB_N
AAA_lid_RFC1
DEAD
AAA_14
DUF815
nSTAND_NTPase5
ResIII
AAA_5
AAA_19
AAA_30
TniB
ATPase_2
PhoH
TIP49
AAA_7
DNAX_ATPase_lid
nSTAND3
bpMoxR
Thioredoxin_6
NPHP3_N
ABC_tran
AAA_28
DUF7939
Motif
Other DBs
NCBI-GeneID:
304528
NCBI-ProteinID:
NP_001100616
RGD:
1309280
Ensembl:
ENSRNOG00000001134
Vega:
OTTRNOG00000001293
UniProt:
A0A9K3Y789
LinkDB
All DBs
Position
12:44868322..44877879
Genome browser
AA seq
338 aa
AA seq
DB search
MAAAPSQQQPRAARARNLPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGPP
GTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKRGFKLV
ILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELM
VPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHP
LKTDIANILDWMLNQDFTTAYKNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRMHLL
TKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgccttcgcagcagcagccccgggcggcccgggcccggaacctgccctgg
gttgagaagtaccggccacagactctggccgatctcatatctcaccaggacatcctgagt
accattcagaagttcatcagtgaagaccgcttgccacacctacttctctatggccctcca
ggcacaggaaagacatccaccattctggcctgtgccaagcaactgtacaaagataaagaa
ttcggctccatggtcttggagctgaatgcttccgacgaccgagggatcgatattgtccgg
gggccaatcctcagctttgccagcacaaggacaatcttcaagagagggtttaagcttgtg
atcctggacgaagctgacgccatgactcaagatgcccagaatgccttgagacgagtgatt
gagaagttcactgaaaacaccaggttttgcctcatctgtaactacctgtccaagatcatc
cctgccttgcagtcacggtgcacgaggttccgatttggccctctgacgcctgagctcatg
gttcctcggctagaacatgtggtacaagaagagaacgtggacataagtgaagatggaatg
aaggcccttgtcactctgtccagtggggacatgcgaagggctttgaacattctgcagagt
accaatatggcctttgggaaggtgacagaggagactgtctacacctgcaccgggcaccca
ctcaagacggatattgccaatattctagactggatgctgaatcaagacttcaccactgcc
tacaaaaatatcatggagctgaagactctgaagggcttggcactgcacgacatcttgaca
gaggttcacttgtttgtgcacagagttgactttccgtcttcagttcggatgcatttattg
accaaaatggcagacattgagtacaggctctctgtcggcaccagtgagaagatccagctg
agctccctcattgctgcttttcaagttaccagggacttgatagttgcagaggcctag
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