Rattus norvegicus (rat): 304558
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Entry
304558 CDS
T01003
Symbol
Ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
304558 (Ttc28)
Cilium and associated proteins [BR:
rno03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
304558 (Ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_16
TPR_17
TPR_9
TPR_19
TPR_6
TPR_NPHP3
TPR_11
ANAPC5
OrgC
Motif
Other DBs
NCBI-GeneID:
304558
NCBI-ProteinID:
XP_006249646
RGD:
1594541
Ensembl:
ENSRNOG00000032590
UniProt:
A0A8I5YBH2
LinkDB
All DBs
Position
12:complement(51002816..51443461)
Genome browser
AA seq
2451 aa
AA seq
DB search
MEQPPPLAPEPASARSRRRREPESPPAPIPLFGAKTIIQRSPDEPALSKAEFVEKVRQSN
QACHDGDFHTAIALYNEALAVDPQNCILYSNRSAAYMKTQQYHKALDDAVKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQL
QKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAHWS
LGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYIA
MGDFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQE
LTEKPIEMRAYAGLGHAARCMQDLERARQYHEQQLSIAEDLKDRAAEGRASSNLGIIHQM
KGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCS
RGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALLNFTKAEECQKYLLSLAQSLDNSQAKFRALGNLGDIFVC
KKDVNGAIKFYEQQLGLSHHVKDRRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQE
LSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYGNMGITKMN
MNVVEDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSV
AQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHELGEASNKAQAYGELGSL
HSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQI
AEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTLSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASAL
FETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPITIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLG
DNSVESSSDFQAGSSAALPIATSSTLEQHIASVREALGVESYYSRACASSETESEAGDIV
EQQLEEMNKQLNSVTDPTGFLRMVRHNNLLHRSCQSMTSLFSGTVSPSKDGTSSLPRRQN
SLAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLVPFALLKGSASNEYL
YERFTLIAVPAVRSLGPHSKGHLRKTPPTYSSSTAMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSMATKERVMSALTQAECIHFATHVSWKLSALVLTPNTEGNP
ASSKSSFGHPYTIPESLRVQDDASDVESISDCPPLRELLLTAADLLDLRLSVKLVVLSSS
QEANSRVTADGLVALTRAFLAAGAQCVLVALWPVPVAASKMFVHAFYSSLLNGLKASASL
GEAMKAVQSSKAFSHPSNWAGFTLIGNDIKLNSPSSLIGQALTEILQHPERARDALRVLL
HLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPAASGLPAAVFFP
TSDPGDRLQQCSSTLQALLGLPNPALQALCKLITASETGEQLISRAVKNMVGMLHQVLVQ
LQACEKEQDFASAPIPVSLSVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQASRRT
THFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNTLPLGYQHPPFSPTGADSIA
SDAISVYSLSSIASSMSFVSKPEGGLEGGAPRGRQDYDRSKSTHPQRATLPRRQMSPQAR
RGVSKEEEEYEGFSIISMEPLATYQGEGKARFSPDPKQPCVKAPGGVRLSVSSKGSVSTP
NSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESSPKLDPQELAQRI
LEETKSHLLAVERLQRSGGPASPDREDGVVAPSSTTVFRASETSAFSKPILSHQRSQLSP
LTIKPQPPARSSSLPKVSSPATSEVSGKDGLSPPGSSHPSPGRDTPVSPADPPLFRLKYP
SSPYSAHISKSPRNTSPACSAPSPALSYSSAGSARSSPADVPDEKVQAVHSLKMLWQSTP
QPPRGPRKICRGAPGTLTSKRDVLSLLNLSPRHGKEEGEADRLELKELSVQRRDEVPPKV
PTNGHWCSDAATLTTASGRSTTAAASRPLRLPLANGYKFLPPGRLFPSSKC
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccgcctcctctggcgcccgagccggcctcggcgcggagccgcaggcggcgg
gagcccgagtctccgccggcgccgattcctctctttggcgctaagactattatccagaga
agtcctgatgaaccagcattgagcaaagctgaatttgttgagaaagttcgtcagagtaac
caggcctgccatgatggagacttccacacagctattgctttgtacaatgaagccctggca
gttgatcctcagaactgcattctgtatagcaacaggtctgcagcctacatgaaaacacag
cagtaccacaaggcactggatgatgcagtcaaagcccggctcctgaaccccaaatggcca
aaggcatacttccgacagggtgttgccctccagtacctcggccggcacgcggatgccctg
gcagccttcgcgtctgggctggctcaggaccccaaaagcctccagctcctggtggggatg
gtggaagctgccatgaagtctcccatgagagacaccctggagcccacttaccagcagctt
cagaaaatgaaactggacaagagtccctttgtggtcgtgtctgtggttgggcaggaactc
ctgacagctggccaccacggggcctccgtggttgtcttagaagctgctctgaagattggc
acttgcagcctcaaactgagaggctctgtcttctccgccctgagcagtgcacactggtct
cttgggaacacagagaagagcactgggtacatgcaacaagacttggacgtagccaagacc
ttaggtgaccagacaggagaatgccgagctcatgggaatctaggctctgcattcttttcc
aaggggaattaccgagaggccctcacaaaccacaggcatcagctggtgctcgccatgaag
ctcaaggaccgggaggcagcgtcgtcagccctgagcagtctgggtcatgtgtacacagcc
atcggagactatcccaacgctctggccagccataagcagtgcgtcctcctcgctaagcag
tccaaagatgacctctctgaagcccgagagctcgggaacatgggagccgtgtacatcgcc
atgggtgactttgagaatgccgtgcagtgccacgagcagcacctgcggatagccaaggac
ctggggagcaagcgcgaggaggcccgtgcctacagcaacctgggcagtgcctaccactac
cggaggaactttgacaaggccatgtcctaccacaactgtgtgctggagctggcgcaggag
ctgacggagaagcccattgagatgcgagcctacgcaggcttgggccatgcagccaggtgc
atgcaggacctggagagggcaagacagtaccatgagcagcagctgagtattgcggaggac
ctcaaggaccgggcggcagagggccgtgcatcctccaacctggggatcatccaccagatg
aaaggcgattatgacacagccctgaagctccacaagacccacctgtgcattgctcaagag
ctgagcgactacgcggcccaaggccgtgcctacggaaatatgggcaatgcctacaacgcc
ctgggcatgtacgaccaggctgtcaagtaccaccgtcaagagctgcagatctccatggaa
gtgaacgaccgtgcctcccaggcttccactcacgggaacctggctgtcgcctaccaggcc
ctgggagcccacgaccgggccctgcagcactaccagaaccacttgaacattgcccgggag
ctgagagacatccagagcgaggcccgggccctcagcaacctggggaacttccactgctcc
agaggagagtacgtccaggctgcaccctactacgagcagtacctccgcctcgctccggac
ctccaggacatggagggagaagggaaggtctgccacaacctcggctacgcccactactgc
cttggaaactaccaggaggccgtgaagtactatgagcaggatctggctctggccaaagac
ctccacgacaaactgagccaagcaaaagcctactgcaacttgggcctggccttcaaggct
ctgctgaacttcaccaaagcagaggagtgtcagaagtaccttctgtccctagcccagtcg
ctggacaattcccaggcaaagttccgagccctggggaacctgggcgatatatttgtctgc
aaaaaggatgtgaacggcgcaataaagttctacgagcagcagttgggcctatctcaccac
gtgaaagacagaaggctggaggccagtgcctacgcggccctgggcaccgcgtaccgcatg
gtccagaagtatgacaaggccttgggctatcacacgcaggagctggaggtctatcaggaa
ctgagcgacctgccgggggagtgccgggcccatgggcacctggcggccgtctacatggcc
ctcggaaaatacacaatggcgttcaagtgttaccaggagcagctggagctggggcggaag
ctgaaagagccgagcctggaagcgcaggtgtacggcaacatgggcatcacgaagatgaac
atgaacgtggtggaggacgccatcggctactttgagcagcagctggccatgctgcagcag
ctcagtgggaacgagtccgtgctggacaggggccgggcctacggcaacctgggggactgc
tacgaggccctgggggactacgaggaagccatcaagtactacgagcagtacctgtccgtc
gcccagagtctgaaccgcatgcaagaccaagccaaggcctaccggggcctaggaaacgga
cacagggcgacggggagcttgcagcaggcccttgtgtgtttcgagaagaggctcgtggtg
gcccatgagctcggggaggcctccaataaagctcaggcctacggagagctgggaagtctc
catagccaattagggaattacgaacaagccatctcctgccttgaacgccagctgaacatc
gccagagacatgaaggacagagccttggaaagcgacgcggcttgcggcctggggggtgtc
taccagcagatgggagagtacgacacagccctgcagtaccaccagctcgatctgcagatt
gcagaggagacagacaatcccacatgccagggccgagcctacgggaacctgggtctcacc
tatgagtccctgggcacttttgagagggctgtggtctatcaggagcagcacctaagcatc
gcggcgcagatgaatgacttggtggccaagactctgtcctacagcagcctgggcaggact
caccacgccttgcagaactattcgcaggcagtcatgtacttacaggaaggtttaaggtta
gctgagcaactaggtcggagagaagatgaagcgaaaattcgccatgggctcggcctctcc
ctttgggccagcgggaacctggaggaggctcagcaccagctttacagagcatcggccttg
tttgaaacgattcggcacgaagcacagctgagcacagactacaagctctccctgtttgac
ctgcagacgtcatcctaccaggccctgcagcgggtgctcgtcagcctaggccatcatgat
gaagccctggcagtagcagaaaggggccggacaagagcatttgctgacctgctggtggaa
agacagactggacaacaggactccgacccctactcacccatcaccatcgatcagatctta
gagatggttaatgcccagcggggactggtgctgtactactccctggccgccggctacctc
tacagctggctgcttgcccctggagcaggaatcctgaagtttcacgaacattacttgggt
gataattcggtggaaagttccagtgatttccaagctggcagcagtgcagcgttgcccata
gcaaccagctctacactggagcagcacatcgccagtgtccgggaggccctgggggtggag
tcttactactccagggcctgtgccagcagtgagacagaaagcgaggctggagacatcgtg
gagcagcagttggaggagatgaacaagcagcttaactcagtcaccgaccccacaggcttc
ctgaggatggtgcgccacaacaacctcctgcacaggagctgccagagcatgacaagcttg
ttcagtggtacggtatcacccagcaaggacgggacctcctccctgcccaggaggcagaac
tcactggccaagcccccactccgtgccctgtacgatctgctcatcgcgcccatggaaggg
ggcttgatgcactccagcggccccgtgggccggcaccggcagctggttctggttctggag
ggggagctctaccttgtcccctttgctctcctgaagggcagcgcctccaacgagtacctg
tatgagcgctttaccctcatcgcagtgcctgccgtccgctcgcttggtccgcactccaag
ggtcacctgaggaagaccccgcccacgtattccagctccaccgccatggcagctgtcata
ggcaaccctaagctcccctcagcagtgatggacaggtggctgtgggggccgatgccctcg
gcagaagaggaggcatacatggtgtcagagcttctgggctgccagccccttgtaggcagt
atggccaccaaggaaagggtcatgagtgccctgacccaggctgagtgtatccactttgct
acccatgtctcttggaaactatcggccttagtcctcacgcccaacacagagggcaacccc
gccagcagcaagagctccttcggtcacccctacacgatccccgagtcactgcgggtgcag
gatgacgcaagtgatgtggaaagcatctcagactgcccaccgctgcgggagctgctcctc
accgcggccgacctcctggacctgcggctgtctgtgaagctagtggtgctcagctcttcc
caggaggccaacagccgcgtcacagcggatggcctggtggcactgacacgggccttccta
gctgctggtgcgcagtgcgtactcgtggctctgtggcccgttccagttgcagcttccaag
atgtttgtccacgccttctactcatccctgctgaatggcctgaaggccagcgcctccctg
ggcgaggccatgaaggcagtgcagagcagcaaggccttctcacatccctccaactgggca
ggtttcacactcatcggcaacgacataaaactgaacagcccctcgtcgctcatcggccag
gcgctcacagagatcctgcagcaccccgagagggcacgggacgctctacgagtgctgctg
cacctggtggagaagtccctgcagcggatccagaatggacagcgcaacgccatgtacacg
tctcagcagagcgtcgagaacaaagtaggcggcatccctgggtggcaggctctcctcaca
gcagtgggcttccggctggaccctgctgccagcggcctgccagcagcagtcttctttcca
acctcagacccaggcgacaggttgcagcaatgcagcagcactctccaggccctgctgggt
ctgcccaacccagctctccaagcactgtgcaagctcatcacagcctcagagacgggagag
cagctcatcagccgggctgttaaaaatatggtgggaatgctccatcaagtgctggttcag
ctgcaggcctgtgagaaggaacaggactttgcctcagctcccattccagtctccctgagt
gtccagctctggcggctcccagggtgtcatgagttcctggcagctctcgggtttgaccta
tgcgaagtaggccaagaggaagtgatcctgaaaaccggtaaacaggctagtcggcgcacc
acccactttgctctccagtccctactgtcactcttcgattccaccgagctccccaagcgc
ctcagcctggacagctcgtcctccctggagtccctggcatctgcacagtctgtgtccaac
actctgcccttgggttaccagcatcctcctttctcacccacgggggcagacagcatcgcc
tcggacgccatctccgtgtacagcctcagctcaattgcctcctccatgagttttgtttcc
aagcccgaggggggactggaaggcggggctccccgaggacgacaggactatgataggtcc
aagagcacccaccctcaacgagccaccctgccacggcgccagatgtccccccaggccaga
cgtggggtcagcaaggaagaagaagaatacgaggggttctccatcatcagcatggaacct
ctggcgacctaccaaggcgaggggaaggcgcgcttctccccagaccccaagcagccctgt
gtcaaggcaccaggtggggtgaggctttcggtcagctccaagggcagtgtcagcaccccc
aactcccccgtgaagatgaccctgatccccagcccgaactcacccttccagaaagtgggt
aaactggcaagttcagacacaggtgagtcggaccagtccagcacggagaccgacagcact
gtgaagtcccaggaggagagcagcccaaagctggacccccaggagctggcccagaggatc
ctagaggagaccaaaagccacctcctggcggtagagcgccttcagcggagcggtggccca
gccagccctgaccgagaagatggggtggtagcacccagcagcaccacagtcttcagggcc
tcagagaccagcgccttcagcaagcctatcctctctcatcagaggagccagctgtcccca
ctcactatcaaaccacagcccccagccaggagctcttcccttcccaaggtaagcagccct
gccacatcagaggtgtcaggcaaggatggcctgagcccgcctggcagcagccatccatcg
cccggccgtgacaccccagtctccccggcagaccctccgctcttcagactcaagtacccc
agctctccgtacagcgctcacatttccaagtccccccggaacacatcccccgcgtgcagt
gcgccatcccctgcgctctcctactcttcagctggctctgctcgctccagtcctgctgat
gtccccgatgagaaggtgcaggcggtgcacagcctcaagatgctctggcagagcacaccc
cagccccccaggggcccccgaaaaatatgtcgaggtgcaccaggaaccttgacatccaaa
agagatgtcctcagcctgctgaacttgtcccctcgccatggcaaggaggagggcgaggca
gacaggctggaactgaaggagctgtctgtgcagcggcgtgacgaggtgccacccaaagtc
cccaccaatggccactggtgttcggatgcagcaacactgacaacagccagtggccgcagc
accacagctgctgcctcgcgccctctgagacttcccttggccaacggttacaagttcctg
cccccaggaaggctcttcccttcctccaaatgttag
DBGET
integrated database retrieval system
