Rattus norvegicus (rat): 304567
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Entry
304567 CDS
T01003
Symbol
Pus1
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rno03016
]
304567 (Pus1)
Enzymes [BR:
rno01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
304567 (Pus1)
Transfer RNA biogenesis [BR:
rno03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
304567 (Pus1)
Prokaryotic type
304567 (Pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
304567
NCBI-ProteinID:
NP_001020734
RGD:
1311871
Ensembl:
ENSRNOG00000037500
UniProt:
Q4KM92
B1WBN5
LinkDB
All DBs
Position
12:51539659..51548975
Genome browser
AA seq
423 aa
AA seq
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MGFPRLWAALLRAWGRWTARPGPRVPGLPPMAGNKVPPALPSHQPDRKGRGGWVWEETEH
PAKRVKGGEDEEPPRKLPKRKIVLLMAYSGKGYHGMQRNLGSSQFRTIEDDLVSALVQAG
CIPENHGTDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILDKINSHLPSHIRILGLK
RVTGGFNSKNKCDARTYCYMLPTFAFAHKDRDVQDESYRLSAETLQQVNRLLGCYKGTHN
FHNFTSQKGPREPSARRYILEMYCEEPFVREGLEFAVIKVKGQSFMMHQIRKMVGLVVAI
VKGYAPESVLERSWGEEKVDVPKAPGLGLVLERVHFEKYNQRFGSDGLHEPLDWAQEEGK
VTAFKEQYIYPTIVSTERDERSMAQWLNTLPIHNFSGTALGADDTGAKVPSSLEGSEGDG
DTD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcccccgcctgtgggccgcactgctgagagcctggggacggtggacggcgcgc
ccaggcccgcgcgtgcccggcctgccgcctatggctggaaacaaggtgccaccagcgctg
ccctcacaccagccggacaggaagggccgaggtggctgggtttgggaggagacggagcat
cctgccaagagggtcaagggcggtgaggatgaagagcctccacgcaagctgccaaagcgc
aaaattgtgctgctcatggcctactccggcaagggctaccacggcatgcagaggaatctg
gggtcctcccagttcaggaccatcgaagatgacttggtatctgccttagtccaggcaggt
tgtatccctgaaaaccatggcacagatatgaggaagatgtctttccagcgatgtgctcgc
acagacaagggtgtgtctgcagctgggcaggtggtatccctaaaggtgtggctaattgat
gacatcctggacaagatcaacagccaccttccatcccatattcggattctgggactgaag
agggtcacaggtgggttcaactccaagaacaagtgtgacgccaggacctattgctacatg
ctacctacctttgcctttgctcataaggaccgggatgtacaggatgagagctatcgccta
agtgcagagaccctgcagcaggtcaaccggcttctgggctgctacaaaggcacgcataac
ttccataacttcacatcacagaaggggccgagagagcctagtgcacgccgctacattctg
gagatgtactgcgaggagccctttgttcgggagggcctggagtttgctgtgatcaaggtg
aagggccagagcttcatgatgcaccagatccggaagatggttggcctggtggtagccatt
gtcaagggttatgcccctgagagtgtcctggagcgaagttggggtgaggagaaggtggat
gtgcccaaggcaccagggcttggcttagtcctggagagggttcactttgagaagtacaat
caacgctttggcagtgacgggctgcatgagcccctggactgggcacaggaggaagggaag
gtgactgctttcaaggagcaatacatctaccctaccattgtcagcactgagcgggatgag
cggtccatggcccagtggcttaacactttgccgatccacaacttcagtggcactgcactt
ggagcggatgacacaggtgccaaggtccccagctccctggagggcagtgaaggggatgga
gacactgactga
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